RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ITPR1Q14643 2758 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 NLRP1Q9C000 1473 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 C5orf42Q9H799 3197 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 A0A1B0GU69 56 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 A0A1B0GV72 72 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 IGLC6P0CF74 106 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 SNCAP37840 140 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 MT1XP80297 61 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 CCDC153Q494R4 210 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 TMEM191AQ9H0A3 160 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 TPT1P8Q9HAU6 139 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 NXT2Q9NPJ8 142 aaKnown RBP-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 HIGD1BQ9P298 99 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 V9GYQ6 96 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 PLEKHH2Q8IVE3 1493 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 TET3O43151 1660 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 APOBP04114 4563 aaKnown RBP-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 NCOA3Q9Y6Q9 1424 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 COL6A5A8TX70 2615 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 FRYQ5TBA9 3013 aa-1.08□□□□□ -2.58
SNORD28-201ENST00000384706 TLN2Q9Y4G6 2542 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 TCHHQ07283 1943 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 MAP3K1Q13233 1512 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 CEP295Q9C0D2 2601 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 E5RI56 91 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 KRTAP19-5Q3LI72 72 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 KCNRGQ8N5I3 272 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 AIF1LQ9BQI0 150 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 ARL2-SNX15V9GYD0 113 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 SRCAPQ6ZRS2 3230 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 OVOS2A0A0J9YW53 1432 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 OVOS2Q6IE36 1432 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 BCORQ6W2J9 1755 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 DNAH1Q9P2D7 4330 aa-1.09□□□□□ -2.58
SNORD28-201ENST00000384706 RANBP2P49792 3224 aaKnown RBP-1.1□□□□□ -2.58
SNORD28-201ENST00000384706 MYO9AB2RTY4 2548 aa-1.1□□□□□ -2.58
SNORD28-201ENST00000384706 SCN7AQ01118 1682 aa-1.1□□□□□ -2.58
SNORD28-201ENST00000384706 CHKB-CPT1BH3BT56 60 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 DBIP07108 87 aaKnown RBP-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 LINC00694P0DN24 101 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 FGF7P21781 194 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 GUCA1AP43080 201 aaPredicted RBP-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 GNG10P50151 68 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 MORN2Q502X0 79 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 MYOZ3Q8TDC0 251 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 SMIM3Q9BZL3 60 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 COPZ2Q9P299 210 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 EDC4Q6P2E9 1401 aaKnown RBP-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 NUP188Q5SRE5 1749 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 PDCD11Q14690 1871 aaKnown RBP-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 SACSQ9NZJ4 4579 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 PBRM1Q86U86 1689 aa-1.1□□□□□ -2.59
SNORD28-201ENST00000384706 CHD7Q9P2D1 2997 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 ANKRD36A6QL64 1941 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 ALKQ9UM73 1620 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 LRRC37AA6NMS7 1700 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 KIAA1551Q9HCM1 1747 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 CLIP1P30622 1438 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 A0A1B0GWA3 101 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 TSTD3H0UI37 97 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 J3QR89 54 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 K7ERU9 68 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 MT1HL1P0DM35 61 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 C12orf73Q69YU5 71 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 C5orf38Q86SI9 138 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 SELENOSQ9BQE4 189 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 UQCR10Q9UDW1 63 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 SMPXQ9UHP9 88 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 GINS2Q9Y248 185 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 HSPB11Q9Y547 144 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 EHBP1L1Q8N3D4 1523 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 RGPD2P0DJD1 1756 aa-1.11□□□□□ -2.59
SNORD28-201ENST00000384706 MBD5Q9P267 1494 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 SMG6Q86US8 1419 aaKnown RBP-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 SPTY2D1-AS1A0A0U1RR47 76 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 TSPAN19P0C672 248 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 C9orf153Q5TBE3 101 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 C6orf201Q7Z4U5 140 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 SPANXCQ9NY87 97 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 ADGRL2O95490 1459 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 EYSQ5T1H1 3165 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 DNAH7Q8WXX0 4024 aa-1.12□□□□□ -2.59
SNORD28-201ENST00000384706 FAM223BA6NKX1 122 aa-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 M0R2Z0 102 aa-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 SAA2P0DJI9 122 aaPredicted RBP-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 NEFHP12036 1026 aa-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 LSM10Q969L4 123 aaKnown RBP-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 PDCD10Q9BUL8 212 aa-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 CENPHQ9H3R5 247 aa-1.13□□□□□ -2.59
SNORD28-201ENST00000384706 FHAD1B1AJZ9 1412 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 CPSF1Q10570 1443 aaKnown RBP-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 SHROOM2Q13796 1616 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 CSMD1Q96PZ7 3565 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 C4AP0C0L4 1744 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 C4BP0C0L5 1744 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 SPTAN1Q13813 2472 aaKnown RBP-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 A0A087WVE0 104 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 H7BZZ5 65 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 SMCO1Q147U7 214 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 SFTA2Q6UW10 78 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms