RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 PRO1854Q9UHT4 67 aa14.52□□□□□ -0.09
GMDS-202ENST00000380815 LINC00308Q8TCZ7 52 aa14.51□□□□□ -0.09
GMDS-202ENST00000380815 A0A0U1RRA0 63 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 GAGE10A6NGK3 116 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 NPC2P61916 151 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 IBA57-AS1B1ANH7 110 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 EIF4EBP3O60516 100 aaPredicted RBP14.5□□□□□ -0.09
GMDS-202ENST00000380815 KIAA0087Q14695 138 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 GTF2H5Q6ZYL4 71 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 PPDPFQ9H3Y8 114 aa14.5□□□□□ -0.09
GMDS-202ENST00000380815 K7EP34 96 aa14.49□□□□□ -0.09
GMDS-202ENST00000380815 TSPAN13O95857 204 aa14.49□□□□□ -0.09
GMDS-202ENST00000380815 DNAH10OSP0CZ25 163 aa14.48□□□□□ -0.09
GMDS-202ENST00000380815 CXCL5P42830 114 aa14.48□□□□□ -0.09
GMDS-202ENST00000380815 KLK5Q9Y337 293 aaPredicted RBP14.48□□□□□ -0.09
GMDS-202ENST00000380815 SPCS1Q9Y6A9 102 aa14.48□□□□□ -0.09
GMDS-202ENST00000380815 STAB2Q8WWQ8 2551 aa14.48□□□□□ -0.09
GMDS-202ENST00000380815 NHLRC4P0CG21 123 aaPredicted RBP14.47□□□□□ -0.09
GMDS-202ENST00000380815 LINC00588Q9Y4M8 146 aa14.47□□□□□ -0.09
GMDS-202ENST00000380815 CCL18P55774 89 aa14.47□□□□□ -0.09
GMDS-202ENST00000380815 CKS1BP61024 79 aa14.47□□□□□ -0.09
GMDS-202ENST00000380815 CFAP161Q6P656 301 aa14.47□□□□□ -0.09
GMDS-202ENST00000380815 COL7A1Q02388 2944 aa14.47□□□□□ -0.09
GMDS-202ENST00000380815 DNAH9Q9NYC9 4486 aa14.46□□□□□ -0.1
GMDS-202ENST00000380815 SOSTDC1Q6X4U4 206 aa14.45□□□□□ -0.1
GMDS-202ENST00000380815 C2orf82Q6UX34 121 aa14.45□□□□□ -0.1
GMDS-202ENST00000380815 ERG28Q9UKR5 140 aa14.45□□□□□ -0.1
GMDS-202ENST00000380815 LINC00158P58513 81 aa14.44□□□□□ -0.1
GMDS-202ENST00000380815 MIR7-3HGQ8N6C7 128 aa14.44□□□□□ -0.1
GMDS-202ENST00000380815 KRTAP26-1Q6PEX3 210 aa14.43□□□□□ -0.1
GMDS-202ENST00000380815 KRTAP21-3Q3LHN1 58 aa14.42□□□□□ -0.1
GMDS-202ENST00000380815 SPAG11BQ08648 103 aa14.41□□□□□ -0.1
GMDS-202ENST00000380815 PFN2P35080 140 aa14.4□□□□□ -0.1
GMDS-202ENST00000380815 UPK3BQ9BT76 320 aa14.4□□□□□ -0.1
GMDS-202ENST00000380815 C1orf43Q9BWL3 253 aa14.39□□□□□ -0.11
GMDS-202ENST00000380815 COX17Q14061 63 aa14.39□□□□□ -0.11
GMDS-202ENST00000380815 LYRM7Q5U5X0 104 aa14.38□□□□□ -0.11
GMDS-202ENST00000380815 LOC107984156A0A0G2JMH3 177 aa14.37□□□□□ -0.11
GMDS-202ENST00000380815 ARL17AQ8IVW1 177 aa14.37□□□□□ -0.11
GMDS-202ENST00000380815 H7C2G1 150 aa14.37□□□□□ -0.11
GMDS-202ENST00000380815 Q1RN00 199 aa14.35□□□□□ -0.11
GMDS-202ENST00000380815 C6orf223Q8N319 242 aa14.34□□□□□ -0.11
GMDS-202ENST00000380815 IGKV2D-24A0A075B6R9 120 aa14.34□□□□□ -0.11
GMDS-202ENST00000380815 NTN5Q8WTR8 489 aaPredicted RBP14.34□□□□□ -0.11
GMDS-202ENST00000380815 SND1-IT1Q9HBX3 110 aa14.34□□□□□ -0.11
GMDS-202ENST00000380815 DNHD1Q96M86 4753 aa14.33□□□□□ -0.11
GMDS-202ENST00000380815 PSMB2P49721 201 aa14.33□□□□□ -0.12
GMDS-202ENST00000380815 UNQ6190/PRO20217Q6UXQ8 127 aa14.33□□□□□ -0.12
GMDS-202ENST00000380815 TRBV30A0A0K0K1B3 111 aa14.32□□□□□ -0.12
GMDS-202ENST00000380815 RPL13AP40429 203 aaKnown RBP14.32□□□□□ -0.12
GMDS-202ENST00000380815 APLNQ9ULZ1 77 aa14.32□□□□□ -0.12
GMDS-202ENST00000380815 C10orf25Q5T742 122 aa14.32□□□□□ -0.12
GMDS-202ENST00000380815 LINC00526Q96FQ7 95 aa14.32□□□□□ -0.12
GMDS-202ENST00000380815 TRBV20-1A0A075B6N2 111 aa14.31□□□□□ -0.12
GMDS-202ENST00000380815 GVQW2A0A096LPI5 108 aaPredicted RBP14.31□□□□□ -0.12
GMDS-202ENST00000380815 SCGB1C2P0DMR2 95 aa14.31□□□□□ -0.12
GMDS-202ENST00000380815 H3BMG7 143 aa14.3□□□□□ -0.12
GMDS-202ENST00000380815 C9orf116Q5BN46 136 aaPredicted RBP14.3□□□□□ -0.12
GMDS-202ENST00000380815 MUC7Q8TAX7 377 aa14.3□□□□□ -0.12
GMDS-202ENST00000380815 Q9HAA7 133 aa14.3□□□□□ -0.12
GMDS-202ENST00000380815 ZNF561-AS1K7EIQ3 104 aa14.29□□□□□ -0.12
GMDS-202ENST00000380815 C15orf56Q8N910 161 aa14.29□□□□□ -0.12
GMDS-202ENST00000380815 MEGF8Q7Z7M0 2845 aa14.28□□□□□ -0.12
GMDS-202ENST00000380815 TRAV13-2A0A0B4J235 113 aa14.28□□□□□ -0.12
GMDS-202ENST00000380815 TRIAP1O43715 76 aa14.28□□□□□ -0.12
GMDS-202ENST00000380815 IGKV2-28A0A075B6P5 120 aa14.27□□□□□ -0.12
GMDS-202ENST00000380815 NUPR2A6NF83 97 aa14.27□□□□□ -0.12
GMDS-202ENST00000380815 IGKV2D-28P01615 120 aa14.27□□□□□ -0.12
GMDS-202ENST00000380815 TCL1BO95988 128 aa14.27□□□□□ -0.13
GMDS-202ENST00000380815 HIGD2BQ4VC39 106 aa14.27□□□□□ -0.13
GMDS-202ENST00000380815 RMI2Q96E14 147 aa14.26□□□□□ -0.13
GMDS-202ENST00000380815 C2orf48Q96LS8 159 aa14.26□□□□□ -0.13
GMDS-202ENST00000380815 F8W1H4 67 aa14.24□□□□□ -0.13
GMDS-202ENST00000380815 COX6CP09669 75 aa14.24□□□□□ -0.13
GMDS-202ENST00000380815 LINC00337Q8N6G1 96 aa14.24□□□□□ -0.13
GMDS-202ENST00000380815 CAMK2N2Q96S95 79 aa14.24□□□□□ -0.13
GMDS-202ENST00000380815 C6orf48Q9UBA6 75 aa14.24□□□□□ -0.13
GMDS-202ENST00000380815 F8WDY8 70 aa14.24□□□□□ -0.13
GMDS-202ENST00000380815 PRKDCP78527 4128 aaKnown RBP14.23□□□□□ -0.13
GMDS-202ENST00000380815 UBE2DNLQ8IWF7 75 aa14.22□□□□□ -0.13
GMDS-202ENST00000380815 NDUFC2O95298 119 aa14.22□□□□□ -0.13
GMDS-202ENST00000380815 PRO0461Q9UI25 63 aa14.21□□□□□ -0.13
GMDS-202ENST00000380815 DYNC2H1Q8NCM8 4307 aaKnown RBP14.21□□□□□ -0.14
GMDS-202ENST00000380815 ATXN8Q156A1 80 aa14.19□□□□□ -0.14
GMDS-202ENST00000380815 Q6ZRU5 148 aa14.18□□□□□ -0.14
GMDS-202ENST00000380815 RPL28P46779 137 aaKnown RBP14.17□□□□□ -0.14
GMDS-202ENST00000380815 CSMD3Q7Z407 3707 aa14.16□□□□□ -0.14
GMDS-202ENST00000380815 WFDC2Q14508 124 aa14.15□□□□□ -0.14
GMDS-202ENST00000380815 KRTAP1-5Q9BYS1 174 aa14.15□□□□□ -0.14
GMDS-202ENST00000380815 SYCNQ0VAF6 134 aa14.14□□□□□ -0.15
GMDS-202ENST00000380815 CASC10Q5T4H9 136 aa14.14□□□□□ -0.15
GMDS-202ENST00000380815 MTURNQ8N3F0 131 aa14.14□□□□□ -0.15
GMDS-202ENST00000380815 USP17L23D6RBM5 183 aa14.14□□□□□ -0.15
GMDS-202ENST00000380815 DNAH1Q9P2D7 4330 aa14.12□□□□□ -0.15
GMDS-202ENST00000380815 LST1O00453 97 aa14.12□□□□□ -0.15
GMDS-202ENST00000380815 PRR3P79522 188 aaKnown RBP14.12□□□□□ -0.15
GMDS-202ENST00000380815 OR13C6PQ8NH95 151 aa14.12□□□□□ -0.15
GMDS-202ENST00000380815 CLEC2BQ92478 149 aa14.12□□□□□ -0.15
GMDS-202ENST00000380815 NDUFC2-KCTD14E9PQ53 114 aa14.11□□□□□ -0.15
GMDS-202ENST00000380815 SMIM11BQ8TCY0 68 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms