RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 A0A087WZ39 114 aa5.89□□□□□ -1.47
HMGN1-202ENST00000380747 A0A0J9YXV3 536 aa5.89□□□□□ -1.47
HMGN1-202ENST00000380747 RAB5BP61020 215 aa5.89□□□□□ -1.47
HMGN1-202ENST00000380747 PMCHL1Q16048 86 aa5.89□□□□□ -1.47
HMGN1-202ENST00000380747 C2orf48Q96LS8 159 aa5.89□□□□□ -1.47
HMGN1-202ENST00000380747 GEMIN7Q9H840 131 aaKnown RBP5.89□□□□□ -1.47
HMGN1-202ENST00000380747 PKIGQ9Y2B9 76 aa5.89□□□□□ -1.47
HMGN1-202ENST00000380747 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-202ENST00000380747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-202ENST00000380747 HBDP02042 147 aa5.88□□□□□ -1.47
HMGN1-202ENST00000380747 SEC11AP67812 179 aa5.88□□□□□ -1.47
HMGN1-202ENST00000380747 MAJINQ3KP22 176 aa5.88□□□□□ -1.47
HMGN1-202ENST00000380747 SERTAD4-AS1Q5TG53 156 aa5.88□□□□□ -1.47
HMGN1-202ENST00000380747 SPACA4Q8TDM5 124 aa5.88□□□□□ -1.47
HMGN1-202ENST00000380747 A0A087WYN8 130 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 A0A096LNI7 61 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 A0A096LNJ9 63 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 LOC107984640A0A0U1RRK4 108 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 TRGC2P03986 189 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 NDUFA6P56556 154 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 HERVK_113P63121 156 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
HMGN1-202ENST00000380747 PMVKQ15126 192 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 FAM19A3Q7Z5A8 133 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 BAGE3Q86Y29 109 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 PACRGQ96M98 296 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-202ENST00000380747 CST9LQ9H4G1 147 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
HMGN1-202ENST00000380747 F8WDY8 70 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 NDUFA1O15239 70 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 PRSS2P07478 247 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 UNQ6190/PRO20217Q6UXQ8 127 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 STPG4Q8N801 248 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 CDKN2A-AS1Q9UH64 79 aa5.86□□□□□ -1.47
HMGN1-202ENST00000380747 TINCRA0A1B0GVN0 87 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 COLCA2A8K830 154 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 SCO1O75880 301 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 ATP5LO75964 103 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 RPL18AQ02543 176 aaKnown RBP5.85□□□□□ -1.47
HMGN1-202ENST00000380747 KIAA0087Q14695 138 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 PDZD11Q5EBL8 140 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 C10orf25Q5T742 122 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 CHCHD1Q96BP2 118 aaKnown RBP5.85□□□□□ -1.47
HMGN1-202ENST00000380747 MRPL35Q9NZE8 188 aaKnown RBP5.85□□□□□ -1.47
HMGN1-202ENST00000380747 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 LINC00474Q9P2X8 69 aa5.85□□□□□ -1.47
HMGN1-202ENST00000380747 HSBP1O75506 76 aa5.84□□□□□ -1.47
HMGN1-202ENST00000380747 RPL37AP61513 92 aaKnown RBP5.84□□□□□ -1.47
HMGN1-202ENST00000380747 C6orf226Q5I0X4 101 aa5.84□□□□□ -1.47
HMGN1-202ENST00000380747 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
HMGN1-202ENST00000380747 C6orf48Q9UBA6 75 aa5.84□□□□□ -1.47
HMGN1-202ENST00000380747 CKS1BP61024 79 aa5.83□□□□□ -1.48
HMGN1-202ENST00000380747 IGLV5-45A0A087WSX0 123 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 SMIM1B2RUZ4 78 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 H3BRM9 83 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 SERF1AO75920 110 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 SPINK8P0C7L1 97 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 IGLC3P0DOY3 106 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 Q8IZM0 81 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 FAM19A2Q8N3H0 131 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
HMGN1-202ENST00000380747 LRP2P98164 4655 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 TRBV30A0A0K0K1B3 111 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 GAGE2EQ4V326 116 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 Q6ZRP5 223 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 IFI27L1Q96BM0 104 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 GAGE2DQ9UEU5 116 aa5.81□□□□□ -1.48
HMGN1-202ENST00000380747 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
HMGN1-202ENST00000380747 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
HMGN1-202ENST00000380747 A0A1W2PNN7 141 aa5.8□□□□□ -1.48
HMGN1-202ENST00000380747 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
HMGN1-202ENST00000380747 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
HMGN1-202ENST00000380747 ZNF22P17026 224 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-202ENST00000380747 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-202ENST00000380747 C9orf116Q5BN46 136 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-202ENST00000380747 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
HMGN1-202ENST00000380747 CHTOPQ9Y3Y2 248 aaKnown RBP5.8□□□□□ -1.48
HMGN1-202ENST00000380747 NDUFC2-KCTD14E9PQ53 114 aa5.79□□□□□ -1.48
HMGN1-202ENST00000380747 F8VRH5 84 aa5.79□□□□□ -1.48
HMGN1-202ENST00000380747 H0Y8G0 127 aa5.79□□□□□ -1.48
HMGN1-202ENST00000380747 CXCL5P42830 114 aa5.79□□□□□ -1.48
HMGN1-202ENST00000380747 TMEM170BQ5T4T1 132 aa5.79□□□□□ -1.48
HMGN1-202ENST00000380747 TRAV12-1A0A0B4J245 112 aa5.78□□□□□ -1.48
HMGN1-202ENST00000380747 LEPROTL1O95214 131 aa5.78□□□□□ -1.48
HMGN1-202ENST00000380747 OXTP01178 125 aa5.78□□□□□ -1.48
HMGN1-202ENST00000380747 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
HMGN1-202ENST00000380747 NUPR1O60356 82 aa5.77□□□□□ -1.49
HMGN1-202ENST00000380747 FABP4P15090 132 aa5.77□□□□□ -1.49
HMGN1-202ENST00000380747 FAM19A5Q7Z5A7 132 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BKO60814 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BJP06899 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BOP23527 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HIST1H2BBP33778 126 aa5.76□□□□□ -1.49
HMGN1-202ENST00000380747 HNRNPA3P51991 378 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms