RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-205ENST00000380180 SOSTDC1Q6X4U4 206 aa13.45□□□□□ -0.26
PDLIM5-205ENST00000380180 MALP21145 153 aa13.44□□□□□ -0.26
PDLIM5-205ENST00000380180 LOC107984156A0A0G2JMH3 177 aa13.44□□□□□ -0.26
PDLIM5-205ENST00000380180 GAGE12HA6NDE8 117 aa13.44□□□□□ -0.26
PDLIM5-205ENST00000380180 ARL17AQ8IVW1 177 aa13.44□□□□□ -0.26
PDLIM5-205ENST00000380180 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
PDLIM5-205ENST00000380180 H7C2G1 150 aa13.43□□□□□ -0.26
PDLIM5-205ENST00000380180 UBE2WQ96B02 151 aa13.43□□□□□ -0.26
PDLIM5-205ENST00000380180 CRPP02741 224 aa13.42□□□□□ -0.26
PDLIM5-205ENST00000380180 COPS9Q8WXC6 57 aa13.42□□□□□ -0.26
PDLIM5-205ENST00000380180 KIAA0087Q14695 138 aa13.42□□□□□ -0.26
PDLIM5-205ENST00000380180 C2orf82Q6UX34 121 aa13.42□□□□□ -0.26
PDLIM5-205ENST00000380180 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
PDLIM5-205ENST00000380180 LINC00158P58513 81 aa13.41□□□□□ -0.26
PDLIM5-205ENST00000380180 MIR7-3HGQ8N6C7 128 aa13.41□□□□□ -0.26
PDLIM5-205ENST00000380180 C15orf53Q8NAA6 179 aa13.4□□□□□ -0.26
PDLIM5-205ENST00000380180 COL7A1Q02388 2944 aa13.4□□□□□ -0.26
PDLIM5-205ENST00000380180 TRAV8-4A0A0B4J246 113 aa13.4□□□□□ -0.26
PDLIM5-205ENST00000380180 H3BMG7 143 aa13.39□□□□□ -0.27
PDLIM5-205ENST00000380180 PFN2P35080 140 aa13.39□□□□□ -0.27
PDLIM5-205ENST00000380180 CKS1BP61024 79 aa13.39□□□□□ -0.27
PDLIM5-205ENST00000380180 Q1RN00 199 aa13.38□□□□□ -0.27
PDLIM5-205ENST00000380180 CFAP161Q6P656 301 aa13.38□□□□□ -0.27
PDLIM5-205ENST00000380180 PSMB2P49721 201 aa13.37□□□□□ -0.27
PDLIM5-205ENST00000380180 PPDPFQ9H3Y8 114 aa13.37□□□□□ -0.27
PDLIM5-205ENST00000380180 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-205ENST00000380180 LINC01556Q5JQF7 62 aa13.37□□□□□ -0.27
PDLIM5-205ENST00000380180 SCGB1C2P0DMR2 95 aa13.36□□□□□ -0.27
PDLIM5-205ENST00000380180 LYRM7Q5U5X0 104 aa13.36□□□□□ -0.27
PDLIM5-205ENST00000380180 CXCL5P42830 114 aa13.35□□□□□ -0.27
PDLIM5-205ENST00000380180 B9D2Q9BPU9 175 aa13.35□□□□□ -0.27
PDLIM5-205ENST00000380180 RPL13AP40429 203 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-205ENST00000380180 LINC00588Q9Y4M8 146 aa13.34□□□□□ -0.27
PDLIM5-205ENST00000380180 TCL1BO95988 128 aa13.33□□□□□ -0.28
PDLIM5-205ENST00000380180 SPAG11BQ08648 103 aa13.33□□□□□ -0.28
PDLIM5-205ENST00000380180 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 CCL18P55774 89 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 KRTAP21-3Q3LHN1 58 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 KRTAP26-1Q6PEX3 210 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 STAB2Q8WWQ8 2551 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 TRIAP1O43715 76 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 DNAH10OSP0CZ25 163 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 C6orf223Q8N319 242 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 SND1-IT1Q9HBX3 110 aa13.32□□□□□ -0.28
PDLIM5-205ENST00000380180 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
PDLIM5-205ENST00000380180 LINC00526Q96FQ7 95 aa13.31□□□□□ -0.28
PDLIM5-205ENST00000380180 F8W1H4 67 aa13.3□□□□□ -0.28
PDLIM5-205ENST00000380180 C9orf116Q5BN46 136 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-205ENST00000380180 UNQ6190/PRO20217Q6UXQ8 127 aa13.29□□□□□ -0.28
PDLIM5-205ENST00000380180 MTURNQ8N3F0 131 aa13.29□□□□□ -0.28
PDLIM5-205ENST00000380180 DNAH9Q9NYC9 4486 aa13.29□□□□□ -0.28
PDLIM5-205ENST00000380180 COX17Q14061 63 aa13.29□□□□□ -0.28
PDLIM5-205ENST00000380180 C10orf25Q5T742 122 aa13.29□□□□□ -0.28
PDLIM5-205ENST00000380180 PRO0461Q9UI25 63 aa13.28□□□□□ -0.28
PDLIM5-205ENST00000380180 WFDC2Q14508 124 aa13.27□□□□□ -0.28
PDLIM5-205ENST00000380180 IGKV2-28A0A075B6P5 120 aa13.27□□□□□ -0.29
PDLIM5-205ENST00000380180 IGKV2D-28P01615 120 aa13.27□□□□□ -0.29
PDLIM5-205ENST00000380180 C1orf43Q9BWL3 253 aa13.27□□□□□ -0.29
PDLIM5-205ENST00000380180 IGKV2D-24A0A075B6R9 120 aa13.25□□□□□ -0.29
PDLIM5-205ENST00000380180 LINC00337Q8N6G1 96 aa13.25□□□□□ -0.29
PDLIM5-205ENST00000380180 NTN5Q8WTR8 489 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-205ENST00000380180 COX6CP09669 75 aa13.24□□□□□ -0.29
PDLIM5-205ENST00000380180 TRAV13-2A0A0B4J235 113 aa13.23□□□□□ -0.29
PDLIM5-205ENST00000380180 Q9HAA7 133 aa13.23□□□□□ -0.29
PDLIM5-205ENST00000380180 HIGD2BQ4VC39 106 aa13.22□□□□□ -0.29
PDLIM5-205ENST00000380180 OCIAD2Q56VL3 154 aa13.22□□□□□ -0.29
PDLIM5-205ENST00000380180 ZNF561-AS1K7EIQ3 104 aa13.21□□□□□ -0.29
PDLIM5-205ENST00000380180 SMCPP49901 116 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-205ENST00000380180 ATXN8Q156A1 80 aa13.21□□□□□ -0.29
PDLIM5-205ENST00000380180 C15orf56Q8N910 161 aa13.21□□□□□ -0.29
PDLIM5-205ENST00000380180 UPK3BQ9BT76 320 aa13.21□□□□□ -0.29
PDLIM5-205ENST00000380180 GVQW2A0A096LPI5 108 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-205ENST00000380180 NHLRC4P0CG21 123 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-205ENST00000380180 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
PDLIM5-205ENST00000380180 C6orf48Q9UBA6 75 aa13.19□□□□□ -0.3
PDLIM5-205ENST00000380180 ETDBQ3ZM63 59 aa13.18□□□□□ -0.3
PDLIM5-205ENST00000380180 CAMK2N2Q96S95 79 aa13.17□□□□□ -0.3
PDLIM5-205ENST00000380180 C9JAW5 83 aa13.16□□□□□ -0.3
PDLIM5-205ENST00000380180 PRR3P79522 188 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-205ENST00000380180 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
PDLIM5-205ENST00000380180 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
PDLIM5-205ENST00000380180 LINC01620Q4KN68 170 aa13.15□□□□□ -0.3
PDLIM5-205ENST00000380180 NDUFC2O95298 119 aa13.15□□□□□ -0.3
PDLIM5-205ENST00000380180 RPL28P46779 137 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-205ENST00000380180 LST1O00453 97 aa13.14□□□□□ -0.31
PDLIM5-205ENST00000380180 OR13C6PQ8NH95 151 aa13.14□□□□□ -0.31
PDLIM5-205ENST00000380180 K7ERU9 68 aa13.13□□□□□ -0.31
PDLIM5-205ENST00000380180 SMIM11BQ8TCY0 68 aa13.13□□□□□ -0.31
PDLIM5-205ENST00000380180 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
PDLIM5-205ENST00000380180 SLC25A20O43772 301 aa13.13□□□□□ -0.31
PDLIM5-205ENST00000380180 Q6ZRU5 148 aa13.13□□□□□ -0.31
PDLIM5-205ENST00000380180 Q8NDZ9 215 aa13.12□□□□□ -0.31
PDLIM5-205ENST00000380180 CSMD3Q7Z407 3707 aa13.09□□□□□ -0.31
PDLIM5-205ENST00000380180 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
PDLIM5-205ENST00000380180 RMI2Q96E14 147 aa13.09□□□□□ -0.31
PDLIM5-205ENST00000380180 TRBV10-2A0A0K0K1G8 114 aa13.08□□□□□ -0.32
PDLIM5-205ENST00000380180 F8WDY8 70 aa13.08□□□□□ -0.32
PDLIM5-205ENST00000380180 UBE2DNLQ8IWF7 75 aa13.08□□□□□ -0.32
PDLIM5-205ENST00000380180 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms