RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 H3BT86 120 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 FHL2Q14192 279 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 CELA1Q9UNI1 258 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
CDKL5-202ENST00000379996 TEX49A0A1B0GTD5 131 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 DAND5Q8N907 189 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 TRAV26-1A0A087WT03 109 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 A0A0J9YWU9 116 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 NTN5Q8WTR8 489 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-202ENST00000379996 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
CDKL5-202ENST00000379996 NOTCH3Q9UM47 2321 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 ATP5G1P05496 136 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 CLEC2BQ92478 149 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 DNAH1Q9P2D7 4330 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 FAM240AA0A1B0GVK7 77 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 DAD1P61803 113 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 Q9H8V8 135 aa5.31□□□□□ -1.56
CDKL5-202ENST00000379996 LOC100131303A0A0U1RQF7 123 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 GAGE7O76087 117 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 GAGE12FP0CL80 117 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 GAGE12GP0CL81 117 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 GAGE12IP0CL82 117 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 NBEAL1Q6ZS30 2694 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 SCGB1C2P0DMR2 95 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 Q6Q795 121 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 C11orf45Q8TAV5 145 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
CDKL5-202ENST00000379996 MEGF8Q7Z7M0 2845 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 IGKV2-28A0A075B6P5 120 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 TRGV2A0A075B6R0 118 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 IGKV2D-28P01615 120 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 PRO0255Q9UI72 69 aa5.3□□□□□ -1.56
CDKL5-202ENST00000379996 TMEM262E9PQX1 116 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 H7C2G1 150 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 NPC2P61916 151 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 RPL36AP83881 106 aaKnown RBP5.29□□□□□ -1.56
CDKL5-202ENST00000379996 RPL36ALQ969Q0 106 aaKnown RBP5.29□□□□□ -1.56
CDKL5-202ENST00000379996 IGHV3OR16-9A0A0B4J2B5 98 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 TRAV10A0A0B4J240 114 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 USP17L23D6RBM5 183 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 COX7A2LO14548 114 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 UBE2WQ96B02 151 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 FAM218AQ96MZ4 157 aa5.29□□□□□ -1.56
CDKL5-202ENST00000379996 A0A1B0GV72 72 aa5.28□□□□□ -1.56
CDKL5-202ENST00000379996 CKS1BP61024 79 aa5.28□□□□□ -1.56
CDKL5-202ENST00000379996 HERV-K104P63124 156 aa5.28□□□□□ -1.56
CDKL5-202ENST00000379996 IGLV4-60A0A075B6I1 120 aa5.28□□□□□ -1.56
CDKL5-202ENST00000379996 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 GAGE4Q13068 117 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 GAGE5Q13069 117 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
CDKL5-202ENST00000379996 DEFB130BP0DP73 79 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 DEFB130AP0DP74 79 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 MGAM2Q2M2H8 2515 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 TRGV4A0A0C4DH28 118 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 DEFB4AO15263 64 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 PRSS2P07478 247 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 TMEM243Q9BU79 118 aa5.27□□□□□ -1.57
CDKL5-202ENST00000379996 TRBV6-8A0A0A6YYG3 113 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 RPL28P46779 137 aaKnown RBP5.26□□□□□ -1.57
CDKL5-202ENST00000379996 Q1RN00 199 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 Q6ZTC4 211 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 LINC00337Q8N6G1 96 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 C15orf53Q8NAA6 179 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 OBSCN-AS1Q96MR7 158 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 A0A087WZ39 114 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 TRAV8-4A0A0B4J246 113 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 TRACP01848 142 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 C2orf82Q6UX34 121 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
CDKL5-202ENST00000379996 NANOS2P60321 138 aaKnown RBP5.25□□□□□ -1.57
CDKL5-202ENST00000379996 COX7B2Q8TF08 81 aa5.25□□□□□ -1.57
CDKL5-202ENST00000379996 DEFB131BA0A096LNP1 70 aa5.25□□□□□ -1.57
CDKL5-202ENST00000379996 NUPR2A6NF83 97 aa5.25□□□□□ -1.57
CDKL5-202ENST00000379996 PAX4O43316 350 aa5.24□□□□□ -1.57
CDKL5-202ENST00000379996 CIRBPQ14011 172 aaKnown RBP5.24□□□□□ -1.57
CDKL5-202ENST00000379996 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
CDKL5-202ENST00000379996 COX6CP09669 75 aa5.24□□□□□ -1.57
CDKL5-202ENST00000379996 A0A096LPF7 62 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 A0A1B0GUV1 79 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 LINC01561Q8N1V8 128 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 COL7A1Q02388 2944 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 NDUFV3P56181 108 aaKnown RBP5.23□□□□□ -1.57
CDKL5-202ENST00000379996 NOTCH1P46531 2555 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 LINC00167Q96N53 147 aa5.23□□□□□ -1.57
CDKL5-202ENST00000379996 LINC00959A0A1B0GUT2 108 aa5.22□□□□□ -1.57
CDKL5-202ENST00000379996 SS18Q15532 418 aa5.22□□□□□ -1.57
CDKL5-202ENST00000379996 UPK3BQ9BT76 320 aa5.22□□□□□ -1.57
CDKL5-202ENST00000379996 IBA57-AS1B1ANH7 110 aa5.22□□□□□ -1.57
CDKL5-202ENST00000379996 CCL18P55774 89 aa5.22□□□□□ -1.57
CDKL5-202ENST00000379996 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
CDKL5-202ENST00000379996 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
CDKL5-202ENST00000379996 KIAA0087Q14695 138 aa5.21□□□□□ -1.58
CDKL5-202ENST00000379996 GAGE6Q13070 117 aa5.21□□□□□ -1.58
CDKL5-202ENST00000379996 LELP1Q5T871 98 aa5.21□□□□□ -1.58
CDKL5-202ENST00000379996 APLNQ9ULZ1 77 aa5.21□□□□□ -1.58
CDKL5-202ENST00000379996 KLK5Q9Y337 293 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms