RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TENM3Q9P273 2699 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 TIMM17BO60830 172 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 PRSS2P07478 247 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 LGALS3P17931 250 aaKnown RBP7.69□□□□□ -1.18
NEDD9-201ENST00000379433 PRB2P02812 416 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-201ENST00000379433 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
NEDD9-201ENST00000379433 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
NEDD9-201ENST00000379433 TRBV7-3A0A075B6L6 115 aa7.68□□□□□ -1.18
NEDD9-201ENST00000379433 ATOX1O00244 68 aa7.68□□□□□ -1.18
NEDD9-201ENST00000379433 NTN5Q8WTR8 489 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-201ENST00000379433 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
NEDD9-201ENST00000379433 BEAN1Q3B7T3 259 aa7.68□□□□□ -1.18
NEDD9-201ENST00000379433 CYSRT1A8MQ03 144 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 K7EQD1 137 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
NEDD9-201ENST00000379433 UBE2L6O14933 153 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 DAND5Q8N907 189 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 LYRM9A8MSI8 78 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 RHOHQ15669 191 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 CHCHD7Q9BUK0 85 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 IMUPQ9GZP8 106 aa7.67□□□□□ -1.18
NEDD9-201ENST00000379433 A8MTW9 85 aa7.66□□□□□ -1.18
NEDD9-201ENST00000379433 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
NEDD9-201ENST00000379433 LAMTOR3Q9UHA4 124 aa7.66□□□□□ -1.18
NEDD9-201ENST00000379433 FAM222AQ5U5X8 452 aa7.66□□□□□ -1.18
NEDD9-201ENST00000379433 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-201ENST00000379433 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
NEDD9-201ENST00000379433 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.18
NEDD9-201ENST00000379433 SLC25A20O43772 301 aa7.65□□□□□ -1.19
NEDD9-201ENST00000379433 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-201ENST00000379433 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.19
NEDD9-201ENST00000379433 C9orf66Q5T8R8 295 aa7.64□□□□□ -1.19
NEDD9-201ENST00000379433 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
NEDD9-201ENST00000379433 TOMM7Q9P0U1 55 aa7.64□□□□□ -1.19
NEDD9-201ENST00000379433 UBE2D4Q9Y2X8 147 aa7.64□□□□□ -1.19
NEDD9-201ENST00000379433 CDKN2A-AS1Q9UH64 79 aa7.64□□□□□ -1.19
NEDD9-201ENST00000379433 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
NEDD9-201ENST00000379433 TIMM21Q9BVV7 248 aa7.63□□□□□ -1.19
NEDD9-201ENST00000379433 GYPEP15421 78 aa7.63□□□□□ -1.19
NEDD9-201ENST00000379433 LINC00474Q9P2X8 69 aa7.63□□□□□ -1.19
NEDD9-201ENST00000379433 COX6A2Q02221 97 aa7.63□□□□□ -1.19
NEDD9-201ENST00000379433 CMC4P56277 68 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-201ENST00000379433 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
NEDD9-201ENST00000379433 COPS9Q8WXC6 57 aa7.62□□□□□ -1.19
NEDD9-201ENST00000379433 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
NEDD9-201ENST00000379433 CXCL5P42830 114 aa7.61□□□□□ -1.19
NEDD9-201ENST00000379433 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
NEDD9-201ENST00000379433 KRTAP24-1Q3LI83 254 aa7.61□□□□□ -1.19
NEDD9-201ENST00000379433 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
NEDD9-201ENST00000379433 LINC01549A6NIU2 74 aa7.6□□□□□ -1.19
NEDD9-201ENST00000379433 IGHV4-30-4P0DP06 118 aa7.6□□□□□ -1.19
NEDD9-201ENST00000379433 Q8N3U1 123 aa7.6□□□□□ -1.19
NEDD9-201ENST00000379433 SERP2Q8N6R1 65 aa7.6□□□□□ -1.19
NEDD9-201ENST00000379433 TEX49A0A1B0GTD5 131 aa7.6□□□□□ -1.19
NEDD9-201ENST00000379433 TMEM223A0PJW6 202 aa7.6□□□□□ -1.19
NEDD9-201ENST00000379433 IGLV10-54A0A075B6I4 117 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 IGHV4-28A0A0C4DH34 117 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 TMEM256-PLSCR3K7ERE1 68 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 FHL2Q14192 279 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 Q1RN00 199 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 CELA1Q9UNI1 258 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 IGLV4-60A0A075B6I1 120 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 UBE2D3P61077 147 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 UBE2D2P62837 147 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 OVOL2Q9BRP0 275 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 X6R8D5 127 aa7.59□□□□□ -1.19
NEDD9-201ENST00000379433 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
NEDD9-201ENST00000379433 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
NEDD9-201ENST00000379433 ANK2Q01484 3957 aa7.58□□□□□ -1.2
NEDD9-201ENST00000379433 TM2D3Q9BRN9 247 aa7.57□□□□□ -1.2
NEDD9-201ENST00000379433 XCL1P47992 114 aa7.57□□□□□ -1.2
NEDD9-201ENST00000379433 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
NEDD9-201ENST00000379433 MUSTN1Q8IVN3 82 aa7.57□□□□□ -1.2
NEDD9-201ENST00000379433 AMELXQ99217 191 aa7.57□□□□□ -1.2
NEDD9-201ENST00000379433 SBSPONQ8IVN8 264 aa7.56□□□□□ -1.2
NEDD9-201ENST00000379433 LEPROTO15243 131 aa7.56□□□□□ -1.2
NEDD9-201ENST00000379433 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
NEDD9-201ENST00000379433 VSIG2Q96IQ7 327 aa7.56□□□□□ -1.2
NEDD9-201ENST00000379433 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
NEDD9-201ENST00000379433 ZNF73O43830 326 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-201ENST00000379433 UBE2D1P51668 147 aa7.55□□□□□ -1.2
NEDD9-201ENST00000379433 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
NEDD9-201ENST00000379433 TRBV7-6A0A0J9YX20 115 aa7.55□□□□□ -1.2
NEDD9-201ENST00000379433 MRPS36P82909 103 aaKnown RBP7.55□□□□□ -1.2
NEDD9-201ENST00000379433 A0A0J9YXY3 114 aa7.55□□□□□ -1.2
NEDD9-201ENST00000379433 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
NEDD9-201ENST00000379433 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 M0R378 163 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-201ENST00000379433 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 STAB2Q8WWQ8 2551 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
NEDD9-201ENST00000379433 KRTAP10-11P60412 298 aa7.53□□□□□ -1.2
NEDD9-201ENST00000379433 UPK3BQ9BT76 320 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms