RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 HIVEP3Q5T1R4 2406 aa9.63□□□□□ -0.87
HIPK3-202ENST00000379016 IGLV1-47P01700 117 aa9.63□□□□□ -0.87
HIPK3-202ENST00000379016 Q8N6K4 173 aa9.63□□□□□ -0.87
HIPK3-202ENST00000379016 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
HIPK3-202ENST00000379016 PTPRBP23467 1997 aa9.62□□□□□ -0.87
HIPK3-202ENST00000379016 FSTL3O95633 263 aa9.62□□□□□ -0.87
HIPK3-202ENST00000379016 CXCL6P80162 114 aa9.61□□□□□ -0.87
HIPK3-202ENST00000379016 PTPRSQ13332 1948 aa9.6□□□□□ -0.87
HIPK3-202ENST00000379016 LINC00313P59037 77 aa9.59□□□□□ -0.87
HIPK3-202ENST00000379016 A0A1W2PNU3 283 aaPredicted RBP9.59□□□□□ -0.87
HIPK3-202ENST00000379016 SMIM29Q86T20 159 aa9.59□□□□□ -0.87
HIPK3-202ENST00000379016 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
HIPK3-202ENST00000379016 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
HIPK3-202ENST00000379016 CRIP1P50238 77 aa9.58□□□□□ -0.88
HIPK3-202ENST00000379016 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
HIPK3-202ENST00000379016 LINC01006Q8NI28 216 aa9.58□□□□□ -0.88
HIPK3-202ENST00000379016 Q96NJ1 140 aa9.58□□□□□ -0.88
HIPK3-202ENST00000379016 SMCR5Q8TEV8 140 aa9.57□□□□□ -0.88
HIPK3-202ENST00000379016 LMO4P61968 165 aa9.57□□□□□ -0.88
HIPK3-202ENST00000379016 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
HIPK3-202ENST00000379016 ZFHX2Q9C0A1 2572 aaPredicted RBP9.57□□□□□ -0.88
HIPK3-202ENST00000379016 LINC01554Q52M75 96 aa9.57□□□□□ -0.88
HIPK3-202ENST00000379016 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
HIPK3-202ENST00000379016 Q8NA96 180 aa9.56□□□□□ -0.88
HIPK3-202ENST00000379016 SIP14410 1827 aa9.56□□□□□ -0.88
HIPK3-202ENST00000379016 LINC00242Q5T6M2 205 aa9.55□□□□□ -0.88
HIPK3-202ENST00000379016 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
HIPK3-202ENST00000379016 F8P00451 2351 aa9.54□□□□□ -0.88
HIPK3-202ENST00000379016 THSD7BQ9C0I4 1608 aa9.54□□□□□ -0.88
HIPK3-202ENST00000379016 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
HIPK3-202ENST00000379016 P0C879 139 aa9.51□□□□□ -0.89
HIPK3-202ENST00000379016 PRORYQ9H606 182 aa9.51□□□□□ -0.89
HIPK3-202ENST00000379016 IGFL2Q6UWQ7 119 aa9.51□□□□□ -0.89
HIPK3-202ENST00000379016 C2CD3Q4AC94 2353 aa9.51□□□□□ -0.89
HIPK3-202ENST00000379016 EDN2P20800 178 aa9.5□□□□□ -0.89
HIPK3-202ENST00000379016 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
HIPK3-202ENST00000379016 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
HIPK3-202ENST00000379016 FAM19A4Q96LR4 140 aa9.49□□□□□ -0.89
HIPK3-202ENST00000379016 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
HIPK3-202ENST00000379016 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
HIPK3-202ENST00000379016 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
HIPK3-202ENST00000379016 C22orf24Q9Y442 160 aa9.49□□□□□ -0.89
HIPK3-202ENST00000379016 CUL9Q8IWT3 2517 aa9.49□□□□□ -0.89
HIPK3-202ENST00000379016 MUC6Q6W4X9 2439 aa9.48□□□□□ -0.89
HIPK3-202ENST00000379016 PRR9Q5T870 116 aa9.48□□□□□ -0.89
HIPK3-202ENST00000379016 C4orf26Q17RF5 130 aa9.48□□□□□ -0.89
HIPK3-202ENST00000379016 LINC01600Q96MT4 127 aa9.48□□□□□ -0.89
HIPK3-202ENST00000379016 ACANP16112 2415 aa9.47□□□□□ -0.89
HIPK3-202ENST00000379016 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.89
HIPK3-202ENST00000379016 Q6ZRU5 148 aa9.46□□□□□ -0.89
HIPK3-202ENST00000379016 C1orf229Q6ZS94 237 aaPredicted RBP9.46□□□□□ -0.9
HIPK3-202ENST00000379016 IGLV6-57P01721 117 aa9.46□□□□□ -0.9
HIPK3-202ENST00000379016 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
HIPK3-202ENST00000379016 C2orf91Q6ZV80 131 aa9.45□□□□□ -0.9
HIPK3-202ENST00000379016 COL5A1P20908 1838 aaPredicted RBP9.45□□□□□ -0.9
HIPK3-202ENST00000379016 CSNK1G2-AS1Q8NCQ2 148 aa9.44□□□□□ -0.9
HIPK3-202ENST00000379016 PRO0628Q9UI54 55 aa9.44□□□□□ -0.9
HIPK3-202ENST00000379016 KRTAP27-1Q3LI81 207 aa9.44□□□□□ -0.9
HIPK3-202ENST00000379016 RPL37AP61513 92 aaKnown RBP9.43□□□□□ -0.9
HIPK3-202ENST00000379016 SMIM1B2RUZ4 78 aa9.43□□□□□ -0.9
HIPK3-202ENST00000379016 EPM2AB3EWF7 344 aa9.43□□□□□ -0.9
HIPK3-202ENST00000379016 ADAMTS20P59510 1910 aa9.43□□□□□ -0.9
HIPK3-202ENST00000379016 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
HIPK3-202ENST00000379016 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
HIPK3-202ENST00000379016 A0A0D9SG42 100 aa9.43□□□□□ -0.9
HIPK3-202ENST00000379016 Q8N2B8 174 aa9.42□□□□□ -0.9
HIPK3-202ENST00000379016 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
HIPK3-202ENST00000379016 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
HIPK3-202ENST00000379016 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
HIPK3-202ENST00000379016 KRTAP10-9P60411 292 aa9.39□□□□□ -0.91
HIPK3-202ENST00000379016 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
HIPK3-202ENST00000379016 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
HIPK3-202ENST00000379016 FBXL19-AS1Q494R0 122 aa9.39□□□□□ -0.91
HIPK3-202ENST00000379016 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
HIPK3-202ENST00000379016 C9orf92A6NGG3 77 aa9.38□□□□□ -0.91
HIPK3-202ENST00000379016 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
HIPK3-202ENST00000379016 C11orf21Q9P2W6 132 aa9.38□□□□□ -0.91
HIPK3-202ENST00000379016 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
HIPK3-202ENST00000379016 KLLNB2CW77 178 aa9.37□□□□□ -0.91
HIPK3-202ENST00000379016 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
HIPK3-202ENST00000379016 EIF4EBP1Q13541 118 aaPredicted RBP9.37□□□□□ -0.91
HIPK3-202ENST00000379016 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
HIPK3-202ENST00000379016 BDP1A6H8Y1 2624 aa9.35□□□□□ -0.91
HIPK3-202ENST00000379016 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
HIPK3-202ENST00000379016 NHLRC4P0CG21 123 aaPredicted RBP9.35□□□□□ -0.91
HIPK3-202ENST00000379016 IGIPA6NJ69 53 aa9.34□□□□□ -0.91
HIPK3-202ENST00000379016 CDSNQ15517 529 aa9.34□□□□□ -0.91
HIPK3-202ENST00000379016 BRWD1-AS2P59051 145 aa9.34□□□□□ -0.91
HIPK3-202ENST00000379016 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
HIPK3-202ENST00000379016 SRCAPQ6ZRS2 3230 aa9.33□□□□□ -0.92
HIPK3-202ENST00000379016 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
HIPK3-202ENST00000379016 F8WDY8 70 aa9.32□□□□□ -0.92
HIPK3-202ENST00000379016 LRRK2Q5S007 2527 aa9.32□□□□□ -0.92
HIPK3-202ENST00000379016 UQCR11O14957 56 aa9.31□□□□□ -0.92
HIPK3-202ENST00000379016 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
HIPK3-202ENST00000379016 IGLV5-37A0A075B6J1 123 aa9.31□□□□□ -0.92
HIPK3-202ENST00000379016 RTL8CO15255 209 aa9.31□□□□□ -0.92
HIPK3-202ENST00000379016 MIR22HGQ0VDD5 57 aa9.31□□□□□ -0.92
HIPK3-202ENST00000379016 AVPP01185 164 aa9.3□□□□□ -0.92
HIPK3-202ENST00000379016 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms