RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 YPEL4Q96NS1 127 aa9.5□□□□□ -0.89
RAB4B-202ENST00000378307 CST9LQ9H4G1 147 aa9.5□□□□□ -0.89
RAB4B-202ENST00000378307 HMCN2Q8NDA2 5059 aa9.5□□□□□ -0.89
RAB4B-202ENST00000378307 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAB4B-202ENST00000378307 Q8IZM0 81 aa9.49□□□□□ -0.89
RAB4B-202ENST00000378307 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
RAB4B-202ENST00000378307 SMCO4Q9NRQ5 59 aa9.49□□□□□ -0.89
RAB4B-202ENST00000378307 TINCRA0A1B0GVN0 87 aa9.48□□□□□ -0.89
RAB4B-202ENST00000378307 SEC11AP67812 179 aa9.48□□□□□ -0.89
RAB4B-202ENST00000378307 NDUFA5Q16718 116 aa9.48□□□□□ -0.89
RAB4B-202ENST00000378307 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
RAB4B-202ENST00000378307 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
RAB4B-202ENST00000378307 PACRGQ96M98 296 aaPredicted RBP9.48□□□□□ -0.89
RAB4B-202ENST00000378307 PSORS1C2Q9UIG4 136 aa9.48□□□□□ -0.89
RAB4B-202ENST00000378307 IGLV5-45A0A087WSX0 123 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 PRSS2P07478 247 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 LINC00614P0C842 121 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
RAB4B-202ENST00000378307 LINC01549A6NIU2 74 aa9.46□□□□□ -0.9
RAB4B-202ENST00000378307 CKS1BP61024 79 aa9.46□□□□□ -0.9
RAB4B-202ENST00000378307 PMVKQ15126 192 aa9.46□□□□□ -0.9
RAB4B-202ENST00000378307 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
RAB4B-202ENST00000378307 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
RAB4B-202ENST00000378307 SPINK8P0C7L1 97 aa9.44□□□□□ -0.9
RAB4B-202ENST00000378307 ODF1Q14990 250 aa9.43□□□□□ -0.9
RAB4B-202ENST00000378307 PDZD11Q5EBL8 140 aa9.43□□□□□ -0.9
RAB4B-202ENST00000378307 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
RAB4B-202ENST00000378307 SLC7A5P1Q8MH63 180 aa9.43□□□□□ -0.9
RAB4B-202ENST00000378307 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
RAB4B-202ENST00000378307 F8VRH5 84 aa9.42□□□□□ -0.9
RAB4B-202ENST00000378307 HBDP02042 147 aa9.42□□□□□ -0.9
RAB4B-202ENST00000378307 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
RAB4B-202ENST00000378307 SERTAD4-AS1Q5TG53 156 aa9.42□□□□□ -0.9
RAB4B-202ENST00000378307 COX7B2Q8TF08 81 aa9.42□□□□□ -0.9
RAB4B-202ENST00000378307 IGLC3P0DOY3 106 aa9.41□□□□□ -0.9
RAB4B-202ENST00000378307 NDUFA6P56556 154 aa9.41□□□□□ -0.9
RAB4B-202ENST00000378307 XAGE1AQ9HD64 81 aa9.41□□□□□ -0.9
RAB4B-202ENST00000378307 M0QXV9 152 aa9.4□□□□□ -0.9
RAB4B-202ENST00000378307 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
RAB4B-202ENST00000378307 CXCL5P42830 114 aa9.38□□□□□ -0.91
RAB4B-202ENST00000378307 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
RAB4B-202ENST00000378307 RAB5BP61020 215 aa9.38□□□□□ -0.91
RAB4B-202ENST00000378307 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
RAB4B-202ENST00000378307 IGLV7-43P04211 117 aa9.37□□□□□ -0.91
RAB4B-202ENST00000378307 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
RAB4B-202ENST00000378307 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
RAB4B-202ENST00000378307 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
RAB4B-202ENST00000378307 BAGE3Q86Y29 109 aa9.36□□□□□ -0.91
RAB4B-202ENST00000378307 H3BRM9 83 aa9.35□□□□□ -0.91
RAB4B-202ENST00000378307 ATP5LO75964 103 aa9.35□□□□□ -0.91
RAB4B-202ENST00000378307 UBE2BP63146 152 aa9.35□□□□□ -0.91
RAB4B-202ENST00000378307 TRGC2P03986 189 aa9.34□□□□□ -0.91
RAB4B-202ENST00000378307 CHCHD1Q96BP2 118 aaKnown RBP9.34□□□□□ -0.91
RAB4B-202ENST00000378307 FAM19A2Q8N3H0 131 aa9.33□□□□□ -0.92
RAB4B-202ENST00000378307 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
RAB4B-202ENST00000378307 UBR4Q5T4S7 5183 aa9.32□□□□□ -0.92
RAB4B-202ENST00000378307 LINC00310P59036 64 aa9.32□□□□□ -0.92
RAB4B-202ENST00000378307 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
RAB4B-202ENST00000378307 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
RAB4B-202ENST00000378307 PFN2P35080 140 aa9.3□□□□□ -0.92
RAB4B-202ENST00000378307 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
RAB4B-202ENST00000378307 COLCA2A8K830 154 aa9.29□□□□□ -0.92
RAB4B-202ENST00000378307 H0Y9J4 135 aa9.29□□□□□ -0.92
RAB4B-202ENST00000378307 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
RAB4B-202ENST00000378307 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
RAB4B-202ENST00000378307 ZNF625Q96I27 306 aaPredicted RBP9.29□□□□□ -0.92
RAB4B-202ENST00000378307 TP73-AS1Q9UF72 201 aa9.29□□□□□ -0.92
RAB4B-202ENST00000378307 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
RAB4B-202ENST00000378307 NUPR1O60356 82 aa9.28□□□□□ -0.92
RAB4B-202ENST00000378307 LINC00167Q96N53 147 aa9.28□□□□□ -0.92
RAB4B-202ENST00000378307 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
RAB4B-202ENST00000378307 HSBP1O75506 76 aa9.27□□□□□ -0.93
RAB4B-202ENST00000378307 SCO1O75880 301 aa9.27□□□□□ -0.93
RAB4B-202ENST00000378307 KRTAP1-4P0C5Y4 121 aa9.27□□□□□ -0.93
RAB4B-202ENST00000378307 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
RAB4B-202ENST00000378307 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
RAB4B-202ENST00000378307 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
RAB4B-202ENST00000378307 TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
RAB4B-202ENST00000378307 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
RAB4B-202ENST00000378307 SERF1AO75920 110 aa9.26□□□□□ -0.93
RAB4B-202ENST00000378307 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
RAB4B-202ENST00000378307 Q8NDZ9 215 aa9.25□□□□□ -0.93
RAB4B-202ENST00000378307 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
RAB4B-202ENST00000378307 LRP2P98164 4655 aa9.24□□□□□ -0.93
RAB4B-202ENST00000378307 ZNF861PO60384 105 aa9.24□□□□□ -0.93
RAB4B-202ENST00000378307 H0Y8G0 127 aa9.22□□□□□ -0.93
RAB4B-202ENST00000378307 VPREB1P12018 145 aa9.22□□□□□ -0.93
RAB4B-202ENST00000378307 COX17Q14061 63 aa9.22□□□□□ -0.93
RAB4B-202ENST00000378307 BCE1O60756 84 aa9.21□□□□□ -0.94
RAB4B-202ENST00000378307 LEPROTL1O95214 131 aa9.21□□□□□ -0.94
RAB4B-202ENST00000378307 NKAPP1Q8N9T2 125 aa9.21□□□□□ -0.94
RAB4B-202ENST00000378307 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
RAB4B-202ENST00000378307 LPAP08519 4548 aa9.19□□□□□ -0.94
RAB4B-202ENST00000378307 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
RAB4B-202ENST00000378307 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
RAB4B-202ENST00000378307 FABP4P15090 132 aa9.19□□□□□ -0.94
RAB4B-202ENST00000378307 LINC00158P58513 81 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms