RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 A6NDN8 102 aa12.11□□□□□ -0.47
IRF3-203ENST00000377139 TTC32Q5I0X7 151 aa12.11□□□□□ -0.47
IRF3-203ENST00000377139 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
IRF3-203ENST00000377139 A6NJY4 79 aa12.1□□□□□ -0.47
IRF3-203ENST00000377139 FXYD2P54710 66 aa12.1□□□□□ -0.47
IRF3-203ENST00000377139 FBN3Q75N90 2809 aa12.1□□□□□ -0.47
IRF3-203ENST00000377139 DNAH7Q8WXX0 4024 aa12.1□□□□□ -0.47
IRF3-203ENST00000377139 IFITM1P13164 125 aa12.08□□□□□ -0.48
IRF3-203ENST00000377139 ADAMTSL4-AS1Q5T5F5 129 aa12.08□□□□□ -0.48
IRF3-203ENST00000377139 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
IRF3-203ENST00000377139 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
IRF3-203ENST00000377139 C2orf82Q6UX34 121 aa12.07□□□□□ -0.48
IRF3-203ENST00000377139 COPS9Q8WXC6 57 aa12.07□□□□□ -0.48
IRF3-203ENST00000377139 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
IRF3-203ENST00000377139 C15orf56Q8N910 161 aa12.06□□□□□ -0.48
IRF3-203ENST00000377139 KRTAP1-5Q9BYS1 174 aa12.06□□□□□ -0.48
IRF3-203ENST00000377139 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
IRF3-203ENST00000377139 MUSTN1Q8IVN3 82 aa12.05□□□□□ -0.48
IRF3-203ENST00000377139 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
IRF3-203ENST00000377139 NBDYA0A0U1RRE5 68 aa12.04□□□□□ -0.48
IRF3-203ENST00000377139 F8WDY8 70 aa12.04□□□□□ -0.48
IRF3-203ENST00000377139 CSMD3Q7Z407 3707 aa12.04□□□□□ -0.48
IRF3-203ENST00000377139 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
IRF3-203ENST00000377139 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
IRF3-203ENST00000377139 LINC00158P58513 81 aa12.04□□□□□ -0.48
IRF3-203ENST00000377139 COX17Q14061 63 aa12.04□□□□□ -0.48
IRF3-203ENST00000377139 NHP2Q9NX24 153 aaKnown RBP12.04□□□□□ -0.48
IRF3-203ENST00000377139 C6orf223Q8N319 242 aa12.03□□□□□ -0.48
IRF3-203ENST00000377139 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
IRF3-203ENST00000377139 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
IRF3-203ENST00000377139 HIGD2BQ4VC39 106 aa12.02□□□□□ -0.49
IRF3-203ENST00000377139 DAND5Q8N907 189 aa12.02□□□□□ -0.49
IRF3-203ENST00000377139 PFN2P35080 140 aa12.01□□□□□ -0.49
IRF3-203ENST00000377139 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
IRF3-203ENST00000377139 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
IRF3-203ENST00000377139 A0A1B0GWB2 263 aa12□□□□□ -0.49
IRF3-203ENST00000377139 A4D1N5 150 aa12□□□□□ -0.49
IRF3-203ENST00000377139 C3orf84H3BNL1 204 aa12□□□□□ -0.49
IRF3-203ENST00000377139 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
IRF3-203ENST00000377139 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
IRF3-203ENST00000377139 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
IRF3-203ENST00000377139 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
IRF3-203ENST00000377139 NPC2P61916 151 aa12□□□□□ -0.49
IRF3-203ENST00000377139 CASC10Q5T4H9 136 aa12□□□□□ -0.49
IRF3-203ENST00000377139 TRBV30A0A0K0K1B3 111 aa11.99□□□□□ -0.49
IRF3-203ENST00000377139 USP17L23D6RBM5 183 aa11.99□□□□□ -0.49
IRF3-203ENST00000377139 PSCAO43653 123 aa11.98□□□□□ -0.49
IRF3-203ENST00000377139 C10orf25Q5T742 122 aa11.98□□□□□ -0.49
IRF3-203ENST00000377139 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
IRF3-203ENST00000377139 STARD9Q9P2P6 4700 aa11.97□□□□□ -0.49
IRF3-203ENST00000377139 A0A0B4J2C4 111 aa11.96□□□□□ -0.5
IRF3-203ENST00000377139 K7ERJ3 54 aa11.96□□□□□ -0.5
IRF3-203ENST00000377139 CFC1BP0CG36 223 aa11.96□□□□□ -0.5
IRF3-203ENST00000377139 CFC1P0CG37 223 aa11.96□□□□□ -0.5
IRF3-203ENST00000377139 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.5
IRF3-203ENST00000377139 C6orf48Q9UBA6 75 aa11.96□□□□□ -0.5
IRF3-203ENST00000377139 RAB37Q96AX2 223 aa11.95□□□□□ -0.5
IRF3-203ENST00000377139 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
IRF3-203ENST00000377139 EIF4EBP3O60516 100 aaPredicted RBP11.94□□□□□ -0.5
IRF3-203ENST00000377139 SYCNQ0VAF6 134 aa11.94□□□□□ -0.5
IRF3-203ENST00000377139 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
IRF3-203ENST00000377139 Q6ZRU5 148 aa11.94□□□□□ -0.5
IRF3-203ENST00000377139 DNAH1Q9P2D7 4330 aa11.93□□□□□ -0.5
IRF3-203ENST00000377139 LYSTQ99698 3801 aa11.92□□□□□ -0.5
IRF3-203ENST00000377139 LOC107984156A0A0G2JMH3 177 aa11.92□□□□□ -0.5
IRF3-203ENST00000377139 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
IRF3-203ENST00000377139 ARL17AQ8IVW1 177 aa11.92□□□□□ -0.5
IRF3-203ENST00000377139 PRO1854Q9UHT4 67 aa11.92□□□□□ -0.5
IRF3-203ENST00000377139 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
IRF3-203ENST00000377139 C14orf177Q52M58 125 aa11.91□□□□□ -0.5
IRF3-203ENST00000377139 LINC00476Q8WZB0 136 aa11.91□□□□□ -0.5
IRF3-203ENST00000377139 CARD19Q96LW7 228 aa11.91□□□□□ -0.5
IRF3-203ENST00000377139 SND1-IT1Q9HBX3 110 aa11.91□□□□□ -0.5
IRF3-203ENST00000377139 A0A1B0GV90 55 aa11.9□□□□□ -0.5
IRF3-203ENST00000377139 M0R2N4 97 aa11.9□□□□□ -0.5
IRF3-203ENST00000377139 LY6G6CO95867 125 aa11.9□□□□□ -0.5
IRF3-203ENST00000377139 Q6ZR54 194 aa11.9□□□□□ -0.5
IRF3-203ENST00000377139 LECT2O14960 151 aa11.89□□□□□ -0.51
IRF3-203ENST00000377139 Q6ZRN7 208 aaPredicted RBP11.89□□□□□ -0.51
IRF3-203ENST00000377139 PGPEP1Q9NXJ5 209 aa11.88□□□□□ -0.51
IRF3-203ENST00000377139 NDUFC2-KCTD14E9PQ53 114 aa11.87□□□□□ -0.51
IRF3-203ENST00000377139 H3BUT2 72 aa11.87□□□□□ -0.51
IRF3-203ENST00000377139 TENM2Q9NT68 2774 aa11.87□□□□□ -0.51
IRF3-203ENST00000377139 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
IRF3-203ENST00000377139 NDUFC2O95298 119 aa11.86□□□□□ -0.51
IRF3-203ENST00000377139 WFDC2Q14508 124 aa11.86□□□□□ -0.51
IRF3-203ENST00000377139 TSPAN13O95857 204 aa11.85□□□□□ -0.51
IRF3-203ENST00000377139 SLPIP03973 132 aa11.85□□□□□ -0.51
IRF3-203ENST00000377139 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
IRF3-203ENST00000377139 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
IRF3-203ENST00000377139 CNBPP62633 177 aaKnown RBP11.83□□□□□ -0.52
IRF3-203ENST00000377139 NAA38Q9BRA0 125 aaKnown RBP11.83□□□□□ -0.52
IRF3-203ENST00000377139 TGP01266 2768 aa11.83□□□□□ -0.52
IRF3-203ENST00000377139 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
IRF3-203ENST00000377139 LRCOL1A6NCL2 159 aa11.82□□□□□ -0.52
IRF3-203ENST00000377139 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
IRF3-203ENST00000377139 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
IRF3-203ENST00000377139 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
IRF3-203ENST00000377139 Q1RN00 199 aa11.82□□□□□ -0.52
IRF3-203ENST00000377139 FABP2P12104 132 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms