RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 H7C2G1 150 aa11.44□□□□□ -0.58
HLA-A-202ENST00000376806 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
HLA-A-202ENST00000376806 Q1RN00 199 aa11.43□□□□□ -0.58
HLA-A-202ENST00000376806 DEFB121Q5J5C9 76 aa11.43□□□□□ -0.58
HLA-A-202ENST00000376806 PPDPFQ9H3Y8 114 aa11.43□□□□□ -0.58
HLA-A-202ENST00000376806 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
HLA-A-202ENST00000376806 FOXI1Q12951 378 aa11.42□□□□□ -0.58
HLA-A-202ENST00000376806 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
HLA-A-202ENST00000376806 WFDC10BQ8IUB3 73 aa11.42□□□□□ -0.58
HLA-A-202ENST00000376806 MRAPQ8TCY5 172 aa11.42□□□□□ -0.58
HLA-A-202ENST00000376806 IBA57-AS1B1ANH7 110 aa11.41□□□□□ -0.58
HLA-A-202ENST00000376806 PSMB2P49721 201 aa11.41□□□□□ -0.58
HLA-A-202ENST00000376806 ENHOQ6UWT2 76 aa11.4□□□□□ -0.58
HLA-A-202ENST00000376806 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.58
HLA-A-202ENST00000376806 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.59
HLA-A-202ENST00000376806 MALP21145 153 aa11.4□□□□□ -0.59
HLA-A-202ENST00000376806 RPL13AP40429 203 aaKnown RBP11.4□□□□□ -0.59
HLA-A-202ENST00000376806 ESRGQ1W209 222 aa11.4□□□□□ -0.59
HLA-A-202ENST00000376806 TCL1BO95988 128 aa11.39□□□□□ -0.59
HLA-A-202ENST00000376806 CRPP02741 224 aa11.39□□□□□ -0.59
HLA-A-202ENST00000376806 SCGB1C2P0DMR2 95 aa11.39□□□□□ -0.59
HLA-A-202ENST00000376806 LINC00158P58513 81 aa11.39□□□□□ -0.59
HLA-A-202ENST00000376806 TRBV20-1A0A075B6N2 111 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 F8W1H4 67 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 PRO0461Q9UI25 63 aa11.38□□□□□ -0.59
HLA-A-202ENST00000376806 TRIAP1O43715 76 aa11.37□□□□□ -0.59
HLA-A-202ENST00000376806 CXCL5P42830 114 aa11.37□□□□□ -0.59
HLA-A-202ENST00000376806 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
HLA-A-202ENST00000376806 PFN2P35080 140 aa11.36□□□□□ -0.59
HLA-A-202ENST00000376806 CKS1BP61024 79 aa11.36□□□□□ -0.59
HLA-A-202ENST00000376806 MTURNQ8N3F0 131 aa11.36□□□□□ -0.59
HLA-A-202ENST00000376806 TRAV8-4A0A0B4J246 113 aa11.36□□□□□ -0.59
HLA-A-202ENST00000376806 OCIAD2Q56VL3 154 aa11.36□□□□□ -0.59
HLA-A-202ENST00000376806 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
HLA-A-202ENST00000376806 WFDC2Q14508 124 aa11.34□□□□□ -0.59
HLA-A-202ENST00000376806 PRKDCP78527 4128 aaKnown RBP11.34□□□□□ -0.59
HLA-A-202ENST00000376806 C15orf53Q8NAA6 179 aa11.34□□□□□ -0.59
HLA-A-202ENST00000376806 KLK5Q9Y337 293 aaPredicted RBP11.34□□□□□ -0.59
HLA-A-202ENST00000376806 CCL18P55774 89 aa11.33□□□□□ -0.6
HLA-A-202ENST00000376806 SPAG11BQ08648 103 aa11.33□□□□□ -0.6
HLA-A-202ENST00000376806 SND1-IT1Q9HBX3 110 aa11.33□□□□□ -0.6
HLA-A-202ENST00000376806 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
HLA-A-202ENST00000376806 SMCPP49901 116 aaPredicted RBP11.3□□□□□ -0.6
HLA-A-202ENST00000376806 COX6CP09669 75 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 IGKV2-28A0A075B6P5 120 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 TRAV13-2A0A0B4J235 113 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 K7ERU9 68 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 IGKV2D-28P01615 120 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 COX17Q14061 63 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 DNAH9Q9NYC9 4486 aa11.29□□□□□ -0.6
HLA-A-202ENST00000376806 FBN3Q75N90 2809 aa11.28□□□□□ -0.6
HLA-A-202ENST00000376806 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
HLA-A-202ENST00000376806 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
HLA-A-202ENST00000376806 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
HLA-A-202ENST00000376806 ETDBQ3ZM63 59 aa11.27□□□□□ -0.6
HLA-A-202ENST00000376806 DNAH10OSP0CZ25 163 aa11.27□□□□□ -0.61
HLA-A-202ENST00000376806 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
HLA-A-202ENST00000376806 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
HLA-A-202ENST00000376806 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 C10orf25Q5T742 122 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 C9JAW5 83 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
HLA-A-202ENST00000376806 B9D2Q9BPU9 175 aa11.24□□□□□ -0.61
HLA-A-202ENST00000376806 LST1O00453 97 aa11.23□□□□□ -0.61
HLA-A-202ENST00000376806 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
HLA-A-202ENST00000376806 SLC25A20O43772 301 aa11.23□□□□□ -0.61
HLA-A-202ENST00000376806 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
HLA-A-202ENST00000376806 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.61
HLA-A-202ENST00000376806 MUC7Q8TAX7 377 aa11.21□□□□□ -0.61
HLA-A-202ENST00000376806 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.62
HLA-A-202ENST00000376806 M0QXV9 152 aa11.21□□□□□ -0.62
HLA-A-202ENST00000376806 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.62
HLA-A-202ENST00000376806 HIGD2BQ4VC39 106 aa11.21□□□□□ -0.62
HLA-A-202ENST00000376806 C15orf56Q8N910 161 aa11.21□□□□□ -0.62
HLA-A-202ENST00000376806 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
HLA-A-202ENST00000376806 NDUFC2O95298 119 aa11.19□□□□□ -0.62
HLA-A-202ENST00000376806 TEN1Q86WV5 123 aa11.19□□□□□ -0.62
HLA-A-202ENST00000376806 C6orf48Q9UBA6 75 aa11.19□□□□□ -0.62
HLA-A-202ENST00000376806 TRBV10-2A0A0K0K1G8 114 aa11.19□□□□□ -0.62
HLA-A-202ENST00000376806 Q9HAA7 133 aa11.19□□□□□ -0.62
HLA-A-202ENST00000376806 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
HLA-A-202ENST00000376806 ANKRD29Q8N6D5 301 aa11.18□□□□□ -0.62
HLA-A-202ENST00000376806 SMIM11BQ8TCY0 68 aa11.18□□□□□ -0.62
HLA-A-202ENST00000376806 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
HLA-A-202ENST00000376806 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
HLA-A-202ENST00000376806 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
HLA-A-202ENST00000376806 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
HLA-A-202ENST00000376806 J3QR89 54 aa11.15□□□□□ -0.62
HLA-A-202ENST00000376806 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
HLA-A-202ENST00000376806 TGP01266 2768 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms