RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 UBE2DNLQ8IWF7 75 aa10.42□□□□□ -0.74
NIPAL3-204ENST00000374399 C6orf223Q8N319 242 aa10.42□□□□□ -0.74
NIPAL3-204ENST00000374399 DAND5Q8N907 189 aa10.42□□□□□ -0.74
NIPAL3-204ENST00000374399 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
NIPAL3-204ENST00000374399 LINC00526Q96FQ7 95 aa10.42□□□□□ -0.74
NIPAL3-204ENST00000374399 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
NIPAL3-204ENST00000374399 Q6ZVH6 145 aa10.41□□□□□ -0.74
NIPAL3-204ENST00000374399 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
NIPAL3-204ENST00000374399 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
NIPAL3-204ENST00000374399 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
NIPAL3-204ENST00000374399 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
NIPAL3-204ENST00000374399 APOMO95445 188 aa10.4□□□□□ -0.74
NIPAL3-204ENST00000374399 PRSS2P07478 247 aa10.4□□□□□ -0.74
NIPAL3-204ENST00000374399 SPAG11BQ08648 103 aa10.4□□□□□ -0.74
NIPAL3-204ENST00000374399 MUC7Q8TAX7 377 aa10.4□□□□□ -0.74
NIPAL3-204ENST00000374399 K7ERJ3 54 aa10.39□□□□□ -0.75
NIPAL3-204ENST00000374399 C10orf25Q5T742 122 aa10.39□□□□□ -0.75
NIPAL3-204ENST00000374399 A0A1B0GWB2 263 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 MEIG1Q5JSS6 88 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 NHP2Q9NX24 153 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 KMT2AQ03164 3969 aa10.38□□□□□ -0.75
NIPAL3-204ENST00000374399 A0A1B0GV90 55 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 A6NDN8 102 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 CXCL5P42830 114 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 CKS1BP61024 79 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 NPC2P61916 151 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 CIRBPQ14011 172 aaKnown RBP10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 DNAH6Q9C0G6 4158 aa10.37□□□□□ -0.75
NIPAL3-204ENST00000374399 A4D1N5 150 aa10.36□□□□□ -0.75
NIPAL3-204ENST00000374399 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
NIPAL3-204ENST00000374399 LINC00308Q8TCZ7 52 aa10.36□□□□□ -0.75
NIPAL3-204ENST00000374399 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
NIPAL3-204ENST00000374399 C9orf116Q5BN46 136 aaPredicted RBP10.36□□□□□ -0.75
NIPAL3-204ENST00000374399 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
NIPAL3-204ENST00000374399 DNAH2Q9P225 4427 aa10.35□□□□□ -0.75
NIPAL3-204ENST00000374399 GVQW2A0A096LPI5 108 aaPredicted RBP10.35□□□□□ -0.75
NIPAL3-204ENST00000374399 CFC1BP0CG36 223 aa10.35□□□□□ -0.75
NIPAL3-204ENST00000374399 CFC1P0CG37 223 aa10.35□□□□□ -0.75
NIPAL3-204ENST00000374399 MIR7-3HGQ8N6C7 128 aa10.35□□□□□ -0.75
NIPAL3-204ENST00000374399 NBDYA0A0U1RRE5 68 aa10.34□□□□□ -0.75
NIPAL3-204ENST00000374399 IFITM1P13164 125 aa10.34□□□□□ -0.75
NIPAL3-204ENST00000374399 PFN2P35080 140 aa10.34□□□□□ -0.75
NIPAL3-204ENST00000374399 ALMS1Q8TCU4 4167 aa10.33□□□□□ -0.76
NIPAL3-204ENST00000374399 LINC00158P58513 81 aa10.33□□□□□ -0.76
NIPAL3-204ENST00000374399 RPL24P83731 157 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-204ENST00000374399 RMI2Q96E14 147 aa10.33□□□□□ -0.76
NIPAL3-204ENST00000374399 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
NIPAL3-204ENST00000374399 RAB37Q96AX2 223 aa10.32□□□□□ -0.76
NIPAL3-204ENST00000374399 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
NIPAL3-204ENST00000374399 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
NIPAL3-204ENST00000374399 TMEM238LA0A1B0GVL6 79 aa10.31□□□□□ -0.76
NIPAL3-204ENST00000374399 A6NJY4 79 aa10.31□□□□□ -0.76
NIPAL3-204ENST00000374399 USP17L23D6RBM5 183 aa10.31□□□□□ -0.76
NIPAL3-204ENST00000374399 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
NIPAL3-204ENST00000374399 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
NIPAL3-204ENST00000374399 SLPIP03973 132 aa10.3□□□□□ -0.76
NIPAL3-204ENST00000374399 WFDC2Q14508 124 aa10.3□□□□□ -0.76
NIPAL3-204ENST00000374399 COX17Q14061 63 aa10.3□□□□□ -0.76
NIPAL3-204ENST00000374399 Q6ZRU5 148 aa10.3□□□□□ -0.76
NIPAL3-204ENST00000374399 NAA38Q9BRA0 125 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-204ENST00000374399 C9orf118A6NHY6 69 aa10.29□□□□□ -0.76
NIPAL3-204ENST00000374399 Q6ZRN7 208 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-204ENST00000374399 A0A0B4J2C4 111 aa10.28□□□□□ -0.76
NIPAL3-204ENST00000374399 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
NIPAL3-204ENST00000374399 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
NIPAL3-204ENST00000374399 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.76
NIPAL3-204ENST00000374399 LECT2O14960 151 aa10.27□□□□□ -0.76
NIPAL3-204ENST00000374399 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.76
NIPAL3-204ENST00000374399 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-204ENST00000374399 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
NIPAL3-204ENST00000374399 H3BUT2 72 aa10.26□□□□□ -0.77
NIPAL3-204ENST00000374399 Q6ZR54 194 aa10.26□□□□□ -0.77
NIPAL3-204ENST00000374399 HYDINQ4G0P3 5121 aa10.25□□□□□ -0.77
NIPAL3-204ENST00000374399 F8WDY8 70 aa10.25□□□□□ -0.77
NIPAL3-204ENST00000374399 M0R2N4 97 aa10.25□□□□□ -0.77
NIPAL3-204ENST00000374399 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
NIPAL3-204ENST00000374399 PRO1854Q9UHT4 67 aa10.25□□□□□ -0.77
NIPAL3-204ENST00000374399 DNAH17Q9UFH2 4485 aa10.25□□□□□ -0.77
NIPAL3-204ENST00000374399 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 TSPAN13O95857 204 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 SYCNQ0VAF6 134 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 Q8NDZ9 215 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 PGPEP1Q9NXJ5 209 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 COPS9Q8WXC6 57 aa10.24□□□□□ -0.77
NIPAL3-204ENST00000374399 LRCOL1A6NCL2 159 aa10.22□□□□□ -0.77
NIPAL3-204ENST00000374399 LINC00476Q8WZB0 136 aa10.22□□□□□ -0.77
NIPAL3-204ENST00000374399 SACSQ9NZJ4 4579 aa10.22□□□□□ -0.77
NIPAL3-204ENST00000374399 C3orf84H3BNL1 204 aa10.21□□□□□ -0.77
NIPAL3-204ENST00000374399 A0A1W2PPM0 123 aa10.21□□□□□ -0.78
NIPAL3-204ENST00000374399 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.78
NIPAL3-204ENST00000374399 PSCAO43653 123 aa10.2□□□□□ -0.78
NIPAL3-204ENST00000374399 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
NIPAL3-204ENST00000374399 NDUFC2-KCTD14E9PQ53 114 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms