RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CXCL5P42830 114 aa8.48□□□□□ -1.05
PRPF4-202ENST00000374199 COX17Q14061 63 aa8.48□□□□□ -1.05
PRPF4-202ENST00000374199 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
PRPF4-202ENST00000374199 ETDBQ3ZM63 59 aa8.48□□□□□ -1.05
PRPF4-202ENST00000374199 C11orf45Q8TAV5 145 aa8.48□□□□□ -1.05
PRPF4-202ENST00000374199 TRAV8-4A0A0B4J246 113 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
PRPF4-202ENST00000374199 MUC7Q8TAX7 377 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 TCL1BO95988 128 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 XCL1P47992 114 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 C5orf38Q86SI9 138 aa8.47□□□□□ -1.05
PRPF4-202ENST00000374199 GVQW2A0A096LPI5 108 aaPredicted RBP8.46□□□□□ -1.05
PRPF4-202ENST00000374199 COX7A2LO14548 114 aa8.46□□□□□ -1.05
PRPF4-202ENST00000374199 ESRGQ1W209 222 aa8.46□□□□□ -1.05
PRPF4-202ENST00000374199 DAND5Q8N907 189 aa8.46□□□□□ -1.05
PRPF4-202ENST00000374199 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.06
PRPF4-202ENST00000374199 ANGP03950 147 aaKnown RBP8.46□□□□□ -1.06
PRPF4-202ENST00000374199 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
PRPF4-202ENST00000374199 MDFIQ99750 246 aa8.46□□□□□ -1.06
PRPF4-202ENST00000374199 TRIAP1O43715 76 aa8.46□□□□□ -1.06
PRPF4-202ENST00000374199 COL7A1Q02388 2944 aa8.45□□□□□ -1.06
PRPF4-202ENST00000374199 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
PRPF4-202ENST00000374199 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
PRPF4-202ENST00000374199 DNAH10OSP0CZ25 163 aa8.45□□□□□ -1.06
PRPF4-202ENST00000374199 DEFB131BA0A096LNP1 70 aa8.44□□□□□ -1.06
PRPF4-202ENST00000374199 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
PRPF4-202ENST00000374199 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
PRPF4-202ENST00000374199 C15orf53Q8NAA6 179 aa8.44□□□□□ -1.06
PRPF4-202ENST00000374199 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
PRPF4-202ENST00000374199 HTN3P15516 51 aa8.44□□□□□ -1.06
PRPF4-202ENST00000374199 PRKDCP78527 4128 aaKnown RBP8.44□□□□□ -1.06
PRPF4-202ENST00000374199 TRAV10A0A0B4J240 114 aa8.43□□□□□ -1.06
PRPF4-202ENST00000374199 PRSS2P07478 247 aa8.43□□□□□ -1.06
PRPF4-202ENST00000374199 MIR7-3HGQ8N6C7 128 aa8.43□□□□□ -1.06
PRPF4-202ENST00000374199 UPK3BQ9BT76 320 aa8.43□□□□□ -1.06
PRPF4-202ENST00000374199 CSMD3Q7Z407 3707 aa8.43□□□□□ -1.06
PRPF4-202ENST00000374199 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
PRPF4-202ENST00000374199 CLPSL2Q6UWE3 100 aa8.42□□□□□ -1.06
PRPF4-202ENST00000374199 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
PRPF4-202ENST00000374199 CCL18P55774 89 aa8.42□□□□□ -1.06
PRPF4-202ENST00000374199 NDUFC2O95298 119 aa8.41□□□□□ -1.06
PRPF4-202ENST00000374199 LYSTQ99698 3801 aa8.41□□□□□ -1.06
PRPF4-202ENST00000374199 J3QR89 54 aa8.41□□□□□ -1.06
PRPF4-202ENST00000374199 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
PRPF4-202ENST00000374199 F8WDY8 70 aa8.4□□□□□ -1.06
PRPF4-202ENST00000374199 RPL28P46779 137 aaKnown RBP8.4□□□□□ -1.06
PRPF4-202ENST00000374199 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
PRPF4-202ENST00000374199 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
PRPF4-202ENST00000374199 LST1O00453 97 aa8.4□□□□□ -1.07
PRPF4-202ENST00000374199 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.07
PRPF4-202ENST00000374199 KLK12Q9UKR0 248 aa8.4□□□□□ -1.07
PRPF4-202ENST00000374199 TRAV13-2A0A0B4J235 113 aa8.39□□□□□ -1.07
PRPF4-202ENST00000374199 NPC2P61916 151 aa8.39□□□□□ -1.07
PRPF4-202ENST00000374199 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
PRPF4-202ENST00000374199 PSMB2P49721 201 aa8.38□□□□□ -1.07
PRPF4-202ENST00000374199 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
PRPF4-202ENST00000374199 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
PRPF4-202ENST00000374199 B9D2Q9BPU9 175 aa8.38□□□□□ -1.07
PRPF4-202ENST00000374199 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
PRPF4-202ENST00000374199 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
PRPF4-202ENST00000374199 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
PRPF4-202ENST00000374199 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
PRPF4-202ENST00000374199 SCGB1A1P11684 91 aa8.37□□□□□ -1.07
PRPF4-202ENST00000374199 A0A1B0GV72 72 aa8.36□□□□□ -1.07
PRPF4-202ENST00000374199 CKS1BP61024 79 aa8.36□□□□□ -1.07
PRPF4-202ENST00000374199 LINC00588Q9Y4M8 146 aa8.36□□□□□ -1.07
PRPF4-202ENST00000374199 LINC00158P58513 81 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 LINC01620Q4KN68 170 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 C2orf48Q96LS8 159 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 MALP21145 153 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 SPAG11BQ08648 103 aa8.35□□□□□ -1.07
PRPF4-202ENST00000374199 PLECQ15149 4684 aaKnown RBP8.34□□□□□ -1.07
PRPF4-202ENST00000374199 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
PRPF4-202ENST00000374199 Q8NDZ9 215 aa8.34□□□□□ -1.07
PRPF4-202ENST00000374199 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
PRPF4-202ENST00000374199 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
PRPF4-202ENST00000374199 TEN1Q86WV5 123 aa8.34□□□□□ -1.07
PRPF4-202ENST00000374199 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
PRPF4-202ENST00000374199 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 CRPP02741 224 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 TRACP01848 142 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 COX6CP09669 75 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 DEFB121Q5J5C9 76 aa8.33□□□□□ -1.08
PRPF4-202ENST00000374199 H3BT86 120 aa8.32□□□□□ -1.08
PRPF4-202ENST00000374199 UNQ6190/PRO20217Q6UXQ8 127 aa8.32□□□□□ -1.08
PRPF4-202ENST00000374199 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
PRPF4-202ENST00000374199 DNAH6Q9C0G6 4158 aa8.32□□□□□ -1.08
PRPF4-202ENST00000374199 SLC25A20O43772 301 aa8.32□□□□□ -1.08
PRPF4-202ENST00000374199 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 PFN2P35080 140 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 C22orf24Q9Y442 160 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 NOTCH1P46531 2555 aa8.31□□□□□ -1.08
PRPF4-202ENST00000374199 Q1RN00 199 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms