RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 LITAFQ99732 161 aa11.7□□□□□ -0.54
C9orf43-202ENST00000374165 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
C9orf43-202ENST00000374165 A0A087WZ39 114 aa11.69□□□□□ -0.54
C9orf43-202ENST00000374165 TMEM238C9JI98 176 aa11.69□□□□□ -0.54
C9orf43-202ENST00000374165 TRAV8-4A0A0B4J246 113 aa11.69□□□□□ -0.54
C9orf43-202ENST00000374165 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
C9orf43-202ENST00000374165 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
C9orf43-202ENST00000374165 FOXI1Q12951 378 aa11.68□□□□□ -0.54
C9orf43-202ENST00000374165 DNAH6Q9C0G6 4158 aa11.67□□□□□ -0.54
C9orf43-202ENST00000374165 TTC32Q5I0X7 151 aa11.67□□□□□ -0.54
C9orf43-202ENST00000374165 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
C9orf43-202ENST00000374165 C1orf43Q9BWL3 253 aa11.67□□□□□ -0.54
C9orf43-202ENST00000374165 ADAMTSL4-AS1Q5T5F5 129 aa11.67□□□□□ -0.54
C9orf43-202ENST00000374165 ZNF625Q96I27 306 aaPredicted RBP11.67□□□□□ -0.54
C9orf43-202ENST00000374165 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
C9orf43-202ENST00000374165 A0A1B0GWB2 263 aa11.66□□□□□ -0.54
C9orf43-202ENST00000374165 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
C9orf43-202ENST00000374165 A6NJY4 79 aa11.66□□□□□ -0.54
C9orf43-202ENST00000374165 NAA38Q9BRA0 125 aaKnown RBP11.65□□□□□ -0.54
C9orf43-202ENST00000374165 LCE6AA0A183 80 aa11.65□□□□□ -0.54
C9orf43-202ENST00000374165 COX7B2Q8TF08 81 aa11.65□□□□□ -0.54
C9orf43-202ENST00000374165 H3BUT2 72 aa11.64□□□□□ -0.55
C9orf43-202ENST00000374165 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
C9orf43-202ENST00000374165 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
C9orf43-202ENST00000374165 TIMM17BO60830 172 aa11.63□□□□□ -0.55
C9orf43-202ENST00000374165 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
C9orf43-202ENST00000374165 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
C9orf43-202ENST00000374165 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
C9orf43-202ENST00000374165 VAMP3Q15836 100 aa11.62□□□□□ -0.55
C9orf43-202ENST00000374165 PRSS2P07478 247 aa11.62□□□□□ -0.55
C9orf43-202ENST00000374165 A4D1N5 150 aa11.61□□□□□ -0.55
C9orf43-202ENST00000374165 COX7A2LO14548 114 aa11.61□□□□□ -0.55
C9orf43-202ENST00000374165 DAND5Q8N907 189 aa11.61□□□□□ -0.55
C9orf43-202ENST00000374165 RYR2Q92736 4967 aa11.61□□□□□ -0.55
C9orf43-202ENST00000374165 APOMO95445 188 aa11.6□□□□□ -0.55
C9orf43-202ENST00000374165 HERV-K104P63124 156 aa11.6□□□□□ -0.55
C9orf43-202ENST00000374165 CIRBPQ14011 172 aaKnown RBP11.6□□□□□ -0.55
C9orf43-202ENST00000374165 CFC1BP0CG36 223 aa11.6□□□□□ -0.55
C9orf43-202ENST00000374165 CFC1P0CG37 223 aa11.6□□□□□ -0.55
C9orf43-202ENST00000374165 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
C9orf43-202ENST00000374165 A0A0U1RRA0 63 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 LECT2O14960 151 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 NPC2P61916 151 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 FRAS1Q86XX4 4008 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 A0A1W2PPM0 123 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 WFDC2Q14508 124 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 MEIG1Q5JSS6 88 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 RMI2Q96E14 147 aa11.59□□□□□ -0.55
C9orf43-202ENST00000374165 EIF4EBP3O60516 100 aaPredicted RBP11.58□□□□□ -0.56
C9orf43-202ENST00000374165 UBE2V1Q13404 147 aa11.58□□□□□ -0.56
C9orf43-202ENST00000374165 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
C9orf43-202ENST00000374165 MALP21145 153 aa11.57□□□□□ -0.56
C9orf43-202ENST00000374165 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
C9orf43-202ENST00000374165 PSCAO43653 123 aa11.57□□□□□ -0.56
C9orf43-202ENST00000374165 C6orf226Q5I0X4 101 aa11.57□□□□□ -0.56
C9orf43-202ENST00000374165 C1orf134Q5TEV5 83 aa11.57□□□□□ -0.56
C9orf43-202ENST00000374165 Q8IZM0 81 aa11.56□□□□□ -0.56
C9orf43-202ENST00000374165 PGPEP1Q9NXJ5 209 aa11.56□□□□□ -0.56
C9orf43-202ENST00000374165 IFITM1P13164 125 aa11.55□□□□□ -0.56
C9orf43-202ENST00000374165 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
C9orf43-202ENST00000374165 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
C9orf43-202ENST00000374165 LINC00308Q8TCZ7 52 aa11.54□□□□□ -0.56
C9orf43-202ENST00000374165 DNAH17Q9UFH2 4485 aa11.54□□□□□ -0.56
C9orf43-202ENST00000374165 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
C9orf43-202ENST00000374165 FABP2P12104 132 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 KIAA0087Q14695 138 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 PRO1854Q9UHT4 67 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 RYR3Q15413 4870 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 A0A0B4J2C4 111 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 LRCOL1A6NCL2 159 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 TSPAN13O95857 204 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 C2orf82Q6UX34 121 aa11.53□□□□□ -0.56
C9orf43-202ENST00000374165 RTL8CO15255 209 aa11.52□□□□□ -0.56
C9orf43-202ENST00000374165 SOSTDC1Q6X4U4 206 aa11.52□□□□□ -0.56
C9orf43-202ENST00000374165 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
C9orf43-202ENST00000374165 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
C9orf43-202ENST00000374165 K7EP34 96 aa11.5□□□□□ -0.57
C9orf43-202ENST00000374165 FAT2Q9NYQ8 4349 aa11.5□□□□□ -0.57
C9orf43-202ENST00000374165 CKS1BP61024 79 aa11.5□□□□□ -0.57
C9orf43-202ENST00000374165 MIR7-3HGQ8N6C7 128 aa11.5□□□□□ -0.57
C9orf43-202ENST00000374165 SPAG11BQ08648 103 aa11.49□□□□□ -0.57
C9orf43-202ENST00000374165 GTF2H5Q6ZYL4 71 aa11.49□□□□□ -0.57
C9orf43-202ENST00000374165 SLPIP03973 132 aa11.48□□□□□ -0.57
C9orf43-202ENST00000374165 PFN2P35080 140 aa11.48□□□□□ -0.57
C9orf43-202ENST00000374165 LINC00158P58513 81 aa11.48□□□□□ -0.57
C9orf43-202ENST00000374165 CFAP161Q6P656 301 aa11.48□□□□□ -0.57
C9orf43-202ENST00000374165 ERG28Q9UKR5 140 aa11.48□□□□□ -0.57
C9orf43-202ENST00000374165 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
C9orf43-202ENST00000374165 TNP2Q05952 138 aa11.48□□□□□ -0.57
C9orf43-202ENST00000374165 CXCL5P42830 114 aa11.47□□□□□ -0.57
C9orf43-202ENST00000374165 C10orf25Q5T742 122 aa11.47□□□□□ -0.57
C9orf43-202ENST00000374165 COPS9Q8WXC6 57 aa11.47□□□□□ -0.57
C9orf43-202ENST00000374165 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
C9orf43-202ENST00000374165 A0A087WTM6 91 aa11.46□□□□□ -0.57
C9orf43-202ENST00000374165 H7C2G1 150 aa11.46□□□□□ -0.57
C9orf43-202ENST00000374165 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
C9orf43-202ENST00000374165 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms