RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
GARNL3-201ENST00000373386 MAP1AP78559 2803 aaPredicted RBP5.85□□□□□ -1.47
GARNL3-201ENST00000373386 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
GARNL3-201ENST00000373386 BAALC-AS2P0C853 105 aa5.84□□□□□ -1.47
GARNL3-201ENST00000373386 CXCL6P80162 114 aa5.84□□□□□ -1.47
GARNL3-201ENST00000373386 USP9YO00507 2555 aaPredicted RBP5.84□□□□□ -1.47
GARNL3-201ENST00000373386 LINC00269Q8N2A0 174 aa5.84□□□□□ -1.47
GARNL3-201ENST00000373386 LINC00846Q9NV44 126 aa5.84□□□□□ -1.47
GARNL3-201ENST00000373386 IGHV3-30-3P0DP02 117 aa5.83□□□□□ -1.48
GARNL3-201ENST00000373386 CD28P10747 220 aa5.83□□□□□ -1.48
GARNL3-201ENST00000373386 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
GARNL3-201ENST00000373386 C4orf3Q8WVX3 66 aa5.83□□□□□ -1.48
GARNL3-201ENST00000373386 GCN1Q92616 2671 aaKnown RBP5.82□□□□□ -1.48
GARNL3-201ENST00000373386 IGKV3-20P01619 116 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 SPINK13Q1W4C9 94 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 Q6ZRP5 223 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 IGHV4-31P0DP07 118 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 LITAFQ99732 161 aa5.82□□□□□ -1.48
GARNL3-201ENST00000373386 PSPHP1O15172 72 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 LINC00337Q8N6G1 96 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 CELSR1Q9NYQ6 3014 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 MED13LQ71F56 2210 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 H0Y9J4 135 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 SPG11Q96JI7 2443 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 MIAQ16674 131 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
GARNL3-201ENST00000373386 ZFHX3Q15911 3703 aa5.8□□□□□ -1.48
GARNL3-201ENST00000373386 DOPEY2Q9Y3R5 2298 aa5.8□□□□□ -1.48
GARNL3-201ENST00000373386 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
GARNL3-201ENST00000373386 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 ZNF469Q96JG9 3925 aaPredicted RBP5.79□□□□□ -1.48
GARNL3-201ENST00000373386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.79□□□□□ -1.487e-8■■■■■ 48.5
GARNL3-201ENST00000373386 PRRC2AP48634 2157 aaKnown RBP5.79□□□□□ -1.48
GARNL3-201ENST00000373386 FAM104AQ969W3 186 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 X6R8D5 127 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 APCP25054 2843 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 POLQO75417 2590 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 PLA2G2AP14555 144 aa5.79□□□□□ -1.48
GARNL3-201ENST00000373386 DEFB113Q30KQ7 82 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 ENHOQ6UWT2 76 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 ESM1Q9NQ30 184 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 C16orf90A8MZG2 172 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 TMEM61Q8N0U2 210 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 C11orf72Q8NBR9 251 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 ABCA12Q86UK0 2595 aa5.78□□□□□ -1.48
GARNL3-201ENST00000373386 ERC2-IT1O76042 136 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 IGHV3-53P01767 116 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 CHCHD7Q9BUK0 85 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 IGHV3-73A0A0B4J1V6 119 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 INSP01308 110 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 CMC4P56277 68 aaPredicted RBP5.77□□□□□ -1.49
GARNL3-201ENST00000373386 FASNP49327 2511 aaKnown RBP5.77□□□□□ -1.49
GARNL3-201ENST00000373386 IGLV5-45A0A087WSX0 123 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 TRBV7-4A0A0J9YYF1 115 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 C22orf24Q9Y442 160 aa5.77□□□□□ -1.49
GARNL3-201ENST00000373386 CR1P17927 2039 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 DEFB131AP59861 70 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 DEFB114Q30KQ6 69 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
GARNL3-201ENST00000373386 NDUFA1O15239 70 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 PROK1P58294 105 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 Q6ZTC4 211 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 C14orf132Q9NPU4 83 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 AKAP9Q99996 3911 aa5.76□□□□□ -1.49
GARNL3-201ENST00000373386 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 PRYO14603 147 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 HTN1P15515 57 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 SLURP1P55000 103 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 ZNF706Q9Y5V0 76 aaPredicted RBP5.75□□□□□ -1.49
GARNL3-201ENST00000373386 ITPR2Q14571 2701 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.75□□□□□ -1.49
GARNL3-201ENST00000373386 LOC100131303A0A0U1RQF7 123 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 IGKV2-29A2NJV5 120 aaPredicted RBP5.75□□□□□ -1.49
GARNL3-201ENST00000373386 WFDC9Q8NEX5 89 aa5.75□□□□□ -1.49
GARNL3-201ENST00000373386 TRBV10-1A0A0K0K1A3 114 aa5.74□□□□□ -1.49
GARNL3-201ENST00000373386 ZANQ9Y493 2812 aa5.74□□□□□ -1.49
GARNL3-201ENST00000373386 KIAA0087Q14695 138 aa5.74□□□□□ -1.49
GARNL3-201ENST00000373386 C6orf99Q4VX62 202 aa5.74□□□□□ -1.49
GARNL3-201ENST00000373386 OBSCN-AS1Q96MR7 158 aa5.74□□□□□ -1.49
GARNL3-201ENST00000373386 PDZD2O15018 2839 aa5.74□□□□□ -1.49
GARNL3-201ENST00000373386 A8MU10 97 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 J3QKU1 62 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 KRTAP10-9P60411 292 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 Q6ZSV7 163 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 KRTAP1-3Q8IUG1 177 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 CDKN2A-AS1Q9UH64 79 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 Q6ZSN1 163 aa5.73□□□□□ -1.49
GARNL3-201ENST00000373386 ANKRD17O75179 2603 aaKnown RBP5.73□□□□□ -1.49
GARNL3-201ENST00000373386 PRM2P04554 102 aa5.72□□□□□ -1.49
GARNL3-201ENST00000373386 Q5VV11 94 aa5.72□□□□□ -1.49
GARNL3-201ENST00000373386 UBL5Q9BZL1 73 aa5.72□□□□□ -1.49
GARNL3-201ENST00000373386 CHKB-CPT1BH3BT56 60 aa5.72□□□□□ -1.49
GARNL3-201ENST00000373386 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
GARNL3-201ENST00000373386 HECTD1Q9ULT8 2610 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms