RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 C10orf25Q5T742 122 aa11.91□□□□□ -0.5
TRAPPC3-204ENST00000373166 PACRGQ96M98 296 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC3-204ENST00000373166 C6orf48Q9UBA6 75 aa11.9□□□□□ -0.5
TRAPPC3-204ENST00000373166 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
TRAPPC3-204ENST00000373166 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
TRAPPC3-204ENST00000373166 TOMM7Q9P0U1 55 aa11.89□□□□□ -0.51
TRAPPC3-204ENST00000373166 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
TRAPPC3-204ENST00000373166 TLX1NBP0CAT3 122 aa11.88□□□□□ -0.51
TRAPPC3-204ENST00000373166 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
TRAPPC3-204ENST00000373166 CKS1BP61024 79 aa11.87□□□□□ -0.51
TRAPPC3-204ENST00000373166 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC3-204ENST00000373166 Q8IZM0 81 aa11.87□□□□□ -0.51
TRAPPC3-204ENST00000373166 LINC00469Q8N7U9 141 aa11.87□□□□□ -0.51
TRAPPC3-204ENST00000373166 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
TRAPPC3-204ENST00000373166 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC3-204ENST00000373166 PMVKQ15126 192 aa11.86□□□□□ -0.51
TRAPPC3-204ENST00000373166 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
TRAPPC3-204ENST00000373166 A0A1W2PNN7 141 aa11.85□□□□□ -0.51
TRAPPC3-204ENST00000373166 LINC00614P0C842 121 aa11.85□□□□□ -0.51
TRAPPC3-204ENST00000373166 RAB5BP61020 215 aa11.85□□□□□ -0.51
TRAPPC3-204ENST00000373166 C6orf226Q5I0X4 101 aa11.85□□□□□ -0.51
TRAPPC3-204ENST00000373166 Q6ZRP5 223 aa11.85□□□□□ -0.51
TRAPPC3-204ENST00000373166 HBDP02042 147 aa11.84□□□□□ -0.51
TRAPPC3-204ENST00000373166 GAGE2EQ4V326 116 aa11.84□□□□□ -0.51
TRAPPC3-204ENST00000373166 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
TRAPPC3-204ENST00000373166 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
TRAPPC3-204ENST00000373166 GAGE2DQ9UEU5 116 aa11.84□□□□□ -0.51
TRAPPC3-204ENST00000373166 NDUFC2-KCTD14E9PQ53 114 aa11.83□□□□□ -0.52
TRAPPC3-204ENST00000373166 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
TRAPPC3-204ENST00000373166 A0A096LNJ9 63 aa11.82□□□□□ -0.52
TRAPPC3-204ENST00000373166 LPAP08519 4548 aa11.81□□□□□ -0.52
TRAPPC3-204ENST00000373166 SMIM1B2RUZ4 78 aa11.81□□□□□ -0.52
TRAPPC3-204ENST00000373166 CXCL5P42830 114 aa11.81□□□□□ -0.52
TRAPPC3-204ENST00000373166 PDZD11Q5EBL8 140 aa11.81□□□□□ -0.52
TRAPPC3-204ENST00000373166 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
TRAPPC3-204ENST00000373166 NDUFA6P56556 154 aa11.8□□□□□ -0.52
TRAPPC3-204ENST00000373166 PMCHL1Q16048 86 aa11.8□□□□□ -0.52
TRAPPC3-204ENST00000373166 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-204ENST00000373166 F8VRH5 84 aa11.79□□□□□ -0.52
TRAPPC3-204ENST00000373166 H3BRM9 83 aa11.79□□□□□ -0.52
TRAPPC3-204ENST00000373166 PHF5AQ7RTV0 110 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-204ENST00000373166 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
TRAPPC3-204ENST00000373166 ATP5LO75964 103 aa11.78□□□□□ -0.52
TRAPPC3-204ENST00000373166 SLC7A5P1Q8MH63 180 aa11.78□□□□□ -0.52
TRAPPC3-204ENST00000373166 COX7B2Q8TF08 81 aa11.78□□□□□ -0.52
TRAPPC3-204ENST00000373166 SPINK8P0C7L1 97 aa11.77□□□□□ -0.53
TRAPPC3-204ENST00000373166 IGLC3P0DOY3 106 aa11.77□□□□□ -0.53
TRAPPC3-204ENST00000373166 CHCHD1Q96BP2 118 aaKnown RBP11.76□□□□□ -0.53
TRAPPC3-204ENST00000373166 M0QXV9 152 aa11.74□□□□□ -0.53
TRAPPC3-204ENST00000373166 C9orf129Q5T035 196 aaKnown RBP11.74□□□□□ -0.53
TRAPPC3-204ENST00000373166 PSORS1C2Q9UIG4 136 aa11.74□□□□□ -0.53
TRAPPC3-204ENST00000373166 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
TRAPPC3-204ENST00000373166 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC3-204ENST00000373166 C1orf137Q5JT78 98 aa11.71□□□□□ -0.53
TRAPPC3-204ENST00000373166 UBE2BP63146 152 aa11.7□□□□□ -0.54
TRAPPC3-204ENST00000373166 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
TRAPPC3-204ENST00000373166 XAGE1AQ9HD64 81 aa11.7□□□□□ -0.54
TRAPPC3-204ENST00000373166 MUC2Q02817 5179 aa11.69□□□□□ -0.54
TRAPPC3-204ENST00000373166 HSBP1O75506 76 aa11.69□□□□□ -0.54
TRAPPC3-204ENST00000373166 TRGC2P03986 189 aa11.69□□□□□ -0.54
TRAPPC3-204ENST00000373166 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
TRAPPC3-204ENST00000373166 C11orf86A6NJI1 115 aa11.68□□□□□ -0.54
TRAPPC3-204ENST00000373166 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
TRAPPC3-204ENST00000373166 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
TRAPPC3-204ENST00000373166 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
TRAPPC3-204ENST00000373166 TRAV12-1A0A0B4J245 112 aa11.65□□□□□ -0.54
TRAPPC3-204ENST00000373166 KRTAP11-1Q8IUC1 163 aa11.65□□□□□ -0.54
TRAPPC3-204ENST00000373166 IGLV7-43P04211 117 aa11.64□□□□□ -0.55
TRAPPC3-204ENST00000373166 LBHQ53QV2 105 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC3-204ENST00000373166 FAM19A2Q8N3H0 131 aa11.63□□□□□ -0.55
TRAPPC3-204ENST00000373166 PRR26Q8N8Z3 221 aa11.63□□□□□ -0.55
TRAPPC3-204ENST00000373166 C22orf24Q9Y442 160 aa11.63□□□□□ -0.55
TRAPPC3-204ENST00000373166 COLCA2A8K830 154 aa11.62□□□□□ -0.55
TRAPPC3-204ENST00000373166 SERF1AO75920 110 aa11.62□□□□□ -0.55
TRAPPC3-204ENST00000373166 SFTA2Q6UW10 78 aa11.62□□□□□ -0.55
TRAPPC3-204ENST00000373166 DIRC1Q969H9 104 aa11.62□□□□□ -0.55
TRAPPC3-204ENST00000373166 TP73-AS1Q9UF72 201 aa11.61□□□□□ -0.55
TRAPPC3-204ENST00000373166 PFN2P35080 140 aa11.6□□□□□ -0.55
TRAPPC3-204ENST00000373166 LEPROTL1O95214 131 aa11.59□□□□□ -0.55
TRAPPC3-204ENST00000373166 MRPL55Q7Z7F7 128 aaKnown RBP11.59□□□□□ -0.55
TRAPPC3-204ENST00000373166 ERG28Q9UKR5 140 aa11.59□□□□□ -0.55
TRAPPC3-204ENST00000373166 A0A0U1RQV1 116 aa11.58□□□□□ -0.56
TRAPPC3-204ENST00000373166 H0Y8G0 127 aa11.58□□□□□ -0.56
TRAPPC3-204ENST00000373166 LINC00310P59036 64 aa11.58□□□□□ -0.56
TRAPPC3-204ENST00000373166 TMEM223A0PJW6 202 aa11.57□□□□□ -0.56
TRAPPC3-204ENST00000373166 NUPR1O60356 82 aa11.57□□□□□ -0.56
TRAPPC3-204ENST00000373166 COX17Q14061 63 aa11.57□□□□□ -0.56
TRAPPC3-204ENST00000373166 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
TRAPPC3-204ENST00000373166 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC3-204ENST00000373166 KRTAP9-2Q9BYQ4 174 aa11.57□□□□□ -0.56
TRAPPC3-204ENST00000373166 HSPB8Q9UJY1 196 aa11.56□□□□□ -0.56
TRAPPC3-204ENST00000373166 H0Y9J4 135 aa11.55□□□□□ -0.56
TRAPPC3-204ENST00000373166 IGLV1-50A0A075B6I6 118 aa11.54□□□□□ -0.56
TRAPPC3-204ENST00000373166 IGLV5-37A0A075B6J1 123 aa11.54□□□□□ -0.56
TRAPPC3-204ENST00000373166 PRR4Q16378 134 aa11.54□□□□□ -0.56
TRAPPC3-204ENST00000373166 SCO1O75880 301 aa11.53□□□□□ -0.56
TRAPPC3-204ENST00000373166 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
TRAPPC3-204ENST00000373166 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
TRAPPC3-204ENST00000373166 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
TRAPPC3-204ENST00000373166 FABP4P15090 132 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms