RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 F5H768 121 aa7.41□□□□□ -1.22
PRPF38B-201ENST00000370021 SS18Q15532 418 aa7.41□□□□□ -1.22
PRPF38B-201ENST00000370021 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
PRPF38B-201ENST00000370021 CFAP46Q8IYW2 2715 aa7.41□□□□□ -1.22
PRPF38B-201ENST00000370021 ANGP03950 147 aaKnown RBP7.4□□□□□ -1.22
PRPF38B-201ENST00000370021 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
PRPF38B-201ENST00000370021 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
PRPF38B-201ENST00000370021 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
PRPF38B-201ENST00000370021 TMEM89A2RUT3 159 aa7.4□□□□□ -1.22
PRPF38B-201ENST00000370021 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.22
PRPF38B-201ENST00000370021 LINC01356Q8N9X3 169 aa7.4□□□□□ -1.23
PRPF38B-201ENST00000370021 MRAPQ8TCY5 172 aa7.4□□□□□ -1.23
PRPF38B-201ENST00000370021 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 DEFB121Q5J5C9 76 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 GYPEP15421 78 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 TMEM258P61165 79 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 MPLKIPQ8TAP9 179 aa7.39□□□□□ -1.23
PRPF38B-201ENST00000370021 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
PRPF38B-201ENST00000370021 PF4P02776 101 aa7.38□□□□□ -1.23
PRPF38B-201ENST00000370021 LINC01561Q8N1V8 128 aa7.38□□□□□ -1.23
PRPF38B-201ENST00000370021 C1orf158Q8N1D5 194 aa7.38□□□□□ -1.23
PRPF38B-201ENST00000370021 TRAV25A0A0B4J276 109 aa7.37□□□□□ -1.23
PRPF38B-201ENST00000370021 CRYGAP11844 174 aa7.37□□□□□ -1.23
PRPF38B-201ENST00000370021 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
PRPF38B-201ENST00000370021 FHL2Q14192 279 aa7.37□□□□□ -1.23
PRPF38B-201ENST00000370021 Q6JHZ5 121 aa7.37□□□□□ -1.23
PRPF38B-201ENST00000370021 NIPBLQ6KC79 2804 aaeCLIP7.37□□□□□ -1.23
PRPF38B-201ENST00000370021 FAM236DA0A1B0GTK5 79 aa7.36□□□□□ -1.23
PRPF38B-201ENST00000370021 FAM236CP0DP71 79 aa7.36□□□□□ -1.23
PRPF38B-201ENST00000370021 ODF3L2Q3SX64 289 aa7.36□□□□□ -1.23
PRPF38B-201ENST00000370021 BRK1Q8WUW1 75 aa7.36□□□□□ -1.23
PRPF38B-201ENST00000370021 IGHV4-28A0A0C4DH34 117 aa7.36□□□□□ -1.23
PRPF38B-201ENST00000370021 FAM222AQ5U5X8 452 aa7.36□□□□□ -1.23
PRPF38B-201ENST00000370021 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
PRPF38B-201ENST00000370021 TRBV10-1A0A0K0K1A3 114 aa7.35□□□□□ -1.23
PRPF38B-201ENST00000370021 TMEM256-PLSCR3K7ERE1 68 aa7.35□□□□□ -1.23
PRPF38B-201ENST00000370021 CCL24O00175 119 aa7.35□□□□□ -1.23
PRPF38B-201ENST00000370021 DEFB105AQ8NG35 78 aa7.35□□□□□ -1.23
PRPF38B-201ENST00000370021 C2orf48Q96LS8 159 aa7.35□□□□□ -1.23
PRPF38B-201ENST00000370021 JMJD7-PLA2G4BH0Y9G9 81 aa7.34□□□□□ -1.23
PRPF38B-201ENST00000370021 RMI2Q96E14 147 aa7.34□□□□□ -1.23
PRPF38B-201ENST00000370021 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
PRPF38B-201ENST00000370021 IBA57-AS1B1ANH7 110 aa7.34□□□□□ -1.23
PRPF38B-201ENST00000370021 MXRA5Q9NR99 2828 aa7.34□□□□□ -1.24
PRPF38B-201ENST00000370021 CCKP06307 115 aa7.34□□□□□ -1.24
PRPF38B-201ENST00000370021 ZNF702PQ9H963 129 aa7.34□□□□□ -1.24
PRPF38B-201ENST00000370021 IGLV5-45A0A087WSX0 123 aa7.33□□□□□ -1.24
PRPF38B-201ENST00000370021 IGSF10Q6WRI0 2623 aa7.33□□□□□ -1.24
PRPF38B-201ENST00000370021 LRCOL1A6NCL2 159 aa7.33□□□□□ -1.24
PRPF38B-201ENST00000370021 Q6ZQY7 126 aa7.33□□□□□ -1.24
PRPF38B-201ENST00000370021 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 KLK9Q2XQG4 91 aa7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 F8WEM9 126 aa7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 BEAN1Q3B7T3 259 aa7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 FLNAP21333 2647 aaKnown RBP7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 TRBV6-4A0A1B0GX49 114 aa7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 APCP25054 2843 aa7.32□□□□□ -1.24
PRPF38B-201ENST00000370021 Q8N814 137 aa7.31□□□□□ -1.24
PRPF38B-201ENST00000370021 Q8N9L7 120 aa7.31□□□□□ -1.24
PRPF38B-201ENST00000370021 Q8N3U1 123 aa7.3□□□□□ -1.24
PRPF38B-201ENST00000370021 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
PRPF38B-201ENST00000370021 ZNF843Q8N446 348 aa7.3□□□□□ -1.24
PRPF38B-201ENST00000370021 CR1P17927 2039 aa7.29□□□□□ -1.24
PRPF38B-201ENST00000370021 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
PRPF38B-201ENST00000370021 TRAV10A0A0B4J240 114 aa7.29□□□□□ -1.24
PRPF38B-201ENST00000370021 C6orf223Q8N319 242 aa7.29□□□□□ -1.24
PRPF38B-201ENST00000370021 BBC3Q96PG8 261 aaPredicted RBP7.28□□□□□ -1.24
PRPF38B-201ENST00000370021 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
PRPF38B-201ENST00000370021 C16orf74Q96GX8 76 aa7.28□□□□□ -1.24
PRPF38B-201ENST00000370021 PRORYQ9H606 182 aa7.28□□□□□ -1.24
PRPF38B-201ENST00000370021 OXTP01178 125 aa7.28□□□□□ -1.24
PRPF38B-201ENST00000370021 KLK12Q9UKR0 248 aa7.28□□□□□ -1.24
PRPF38B-201ENST00000370021 A0A087WZ39 114 aa7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 UNQ6190/PRO20217Q6UXQ8 127 aa7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 CHCHD10Q8WYQ3 142 aaPredicted RBP7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 PRR4Q16378 134 aa7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 NDUFC2O95298 119 aa7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 Q6YL49 198 aa7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 ITPR3Q14573 2671 aa7.27□□□□□ -1.25
PRPF38B-201ENST00000370021 C3orf84H3BNL1 204 aa7.26□□□□□ -1.25
PRPF38B-201ENST00000370021 M0R2N4 97 aa7.26□□□□□ -1.25
PRPF38B-201ENST00000370021 C4orf3Q8WVX3 66 aa7.26□□□□□ -1.25
PRPF38B-201ENST00000370021 SPAG11BQ08648 103 aa7.26□□□□□ -1.25
PRPF38B-201ENST00000370021 HIGD2BQ4VC39 106 aa7.26□□□□□ -1.25
PRPF38B-201ENST00000370021 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
PRPF38B-201ENST00000370021 USP24Q9UPU5 2620 aa7.25□□□□□ -1.25
PRPF38B-201ENST00000370021 RPS28P62857 69 aaKnown RBP7.25□□□□□ -1.25
PRPF38B-201ENST00000370021 LINC01006Q8NI28 216 aa7.25□□□□□ -1.25
PRPF38B-201ENST00000370021 LINC00482Q8N8I6 264 aa7.25□□□□□ -1.25
PRPF38B-201ENST00000370021 LINC00474Q9P2X8 69 aa7.25□□□□□ -1.25
PRPF38B-201ENST00000370021 REG3AQ06141 175 aa7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 LINC01547P58512 204 aaPredicted RBP7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 CELA1Q9UNI1 258 aa7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 LINC00336Q6ZUF6 198 aa7.24□□□□□ -1.25
PRPF38B-201ENST00000370021 Q6ZVQ6 151 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms