RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CEND1Q8N111 149 aa15.84■□□□□ 0.13
SNX3-203ENST00000368979 SRSF9Q13242 221 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNX3-203ENST00000368979 C2orf82Q6UX34 121 aa15.84■□□□□ 0.13
SNX3-203ENST00000368979 TM2D2Q9BX73 214 aa15.84■□□□□ 0.13
SNX3-203ENST00000368979 COX11Q9Y6N1 276 aa15.84■□□□□ 0.13
SNX3-203ENST00000368979 GCSHP23434 173 aa15.83■□□□□ 0.12
SNX3-203ENST00000368979 CKS1BP61024 79 aa15.83■□□□□ 0.12
SNX3-203ENST00000368979 ADAMTSL4-AS1Q5T5F5 129 aa15.83■□□□□ 0.12
SNX3-203ENST00000368979 SPANXDQ9BXN6 97 aa15.83■□□□□ 0.12
SNX3-203ENST00000368979 SPANXCQ9NY87 97 aa15.83■□□□□ 0.12
SNX3-203ENST00000368979 C3orf84H3BNL1 204 aa15.82■□□□□ 0.12
SNX3-203ENST00000368979 MEIG1Q5JSS6 88 aa15.82■□□□□ 0.12
SNX3-203ENST00000368979 CIRBPQ14011 172 aaKnown RBP15.81■□□□□ 0.12
SNX3-203ENST00000368979 NTN5Q8WTR8 489 aaPredicted RBP15.81■□□□□ 0.12
SNX3-203ENST00000368979 VPS13DQ5THJ4 4388 aa15.81■□□□□ 0.12
SNX3-203ENST00000368979 FXYD2P54710 66 aa15.8■□□□□ 0.12
SNX3-203ENST00000368979 C6orf223Q8N319 242 aa15.8■□□□□ 0.12
SNX3-203ENST00000368979 GVQW2A0A096LPI5 108 aaPredicted RBP15.79■□□□□ 0.12
SNX3-203ENST00000368979 HIGD2BQ4VC39 106 aa15.79■□□□□ 0.12
SNX3-203ENST00000368979 LINC00526Q96FQ7 95 aa15.79■□□□□ 0.12
SNX3-203ENST00000368979 TENM2Q9NT68 2774 aa15.79■□□□□ 0.12
SNX3-203ENST00000368979 SMIM13P0DJ93 91 aa15.78■□□□□ 0.12
SNX3-203ENST00000368979 Q6ZVH6 145 aa15.78■□□□□ 0.12
SNX3-203ENST00000368979 ZNF561-AS1K7EIQ3 104 aa15.77■□□□□ 0.11
SNX3-203ENST00000368979 ERG28Q9UKR5 140 aa15.77■□□□□ 0.11
SNX3-203ENST00000368979 A0A0U1RRA0 63 aa15.75■□□□□ 0.11
SNX3-203ENST00000368979 C10orf25Q5T742 122 aa15.75■□□□□ 0.11
SNX3-203ENST00000368979 UNQ6190/PRO20217Q6UXQ8 127 aa15.75■□□□□ 0.11
SNX3-203ENST00000368979 DAND5Q8N907 189 aa15.75■□□□□ 0.11
SNX3-203ENST00000368979 C2orf48Q96LS8 159 aa15.75■□□□□ 0.11
SNX3-203ENST00000368979 USP17L23D6RBM5 183 aa15.74■□□□□ 0.11
SNX3-203ENST00000368979 MUSTN1Q8IVN3 82 aa15.74■□□□□ 0.11
SNX3-203ENST00000368979 PTTG1IPP53801 180 aa15.73■□□□□ 0.11
SNX3-203ENST00000368979 LBHQ53QV2 105 aaPredicted RBP15.73■□□□□ 0.11
SNX3-203ENST00000368979 LINC00476Q8WZB0 136 aa15.73■□□□□ 0.11
SNX3-203ENST00000368979 F8WDY8 70 aa15.72■□□□□ 0.11
SNX3-203ENST00000368979 IFITM1P13164 125 aa15.72■□□□□ 0.11
SNX3-203ENST00000368979 PFN2P35080 140 aa15.71■□□□□ 0.11
SNX3-203ENST00000368979 LINC00158P58513 81 aa15.71■□□□□ 0.11
SNX3-203ENST00000368979 COL5A1-AS1Q5SY13 56 aa15.71■□□□□ 0.11
SNX3-203ENST00000368979 Q6ZR54 194 aa15.71■□□□□ 0.11
SNX3-203ENST00000368979 CAMK2N2Q96S95 79 aa15.71■□□□□ 0.11
SNX3-203ENST00000368979 A6NDN8 102 aa15.7■□□□□ 0.1
SNX3-203ENST00000368979 LY6G6CO95867 125 aa15.7■□□□□ 0.1
SNX3-203ENST00000368979 COX17Q14061 63 aa15.7■□□□□ 0.1
SNX3-203ENST00000368979 MIR7-3HGQ8N6C7 128 aa15.7■□□□□ 0.1
SNX3-203ENST00000368979 LINC00308Q8TCZ7 52 aa15.7■□□□□ 0.1
SNX3-203ENST00000368979 C6orf48Q9UBA6 75 aa15.7■□□□□ 0.1
SNX3-203ENST00000368979 TMEM238LA0A1B0GVL6 79 aa15.69■□□□□ 0.1
SNX3-203ENST00000368979 A6NJY4 79 aa15.69■□□□□ 0.1
SNX3-203ENST00000368979 M0R2N4 97 aa15.69■□□□□ 0.1
SNX3-203ENST00000368979 NPC2P61916 151 aa15.69■□□□□ 0.1
SNX3-203ENST00000368979 RPL24P83731 157 aaKnown RBP15.69■□□□□ 0.1
SNX3-203ENST00000368979 C9orf116Q5BN46 136 aaPredicted RBP15.69■□□□□ 0.1
SNX3-203ENST00000368979 Q6ZRN7 208 aaPredicted RBP15.69■□□□□ 0.1
SNX3-203ENST00000368979 TRBV30A0A0K0K1B3 111 aa15.68■□□□□ 0.1
SNX3-203ENST00000368979 PSCAO43653 123 aa15.68■□□□□ 0.1
SNX3-203ENST00000368979 EIF4EBP3O60516 100 aaPredicted RBP15.68■□□□□ 0.1
SNX3-203ENST00000368979 PPDPFQ9H3Y8 114 aa15.68■□□□□ 0.1
SNX3-203ENST00000368979 SOSTDC1Q6X4U4 206 aa15.68■□□□□ 0.1
SNX3-203ENST00000368979 Q6ZRU5 148 aa15.68■□□□□ 0.1
SNX3-203ENST00000368979 NHP2Q9NX24 153 aaKnown RBP15.68■□□□□ 0.1
SNX3-203ENST00000368979 A4D1N5 150 aa15.67■□□□□ 0.1
SNX3-203ENST00000368979 A0A1B0GWB2 263 aa15.66■□□□□ 0.1
SNX3-203ENST00000368979 LECT2O14960 151 aa15.66■□□□□ 0.1
SNX3-203ENST00000368979 WFDC2Q14508 124 aa15.66■□□□□ 0.1
SNX3-203ENST00000368979 COPS9Q8WXC6 57 aa15.66■□□□□ 0.1
SNX3-203ENST00000368979 SYCNQ0VAF6 134 aa15.64■□□□□ 0.09
SNX3-203ENST00000368979 K7ERJ3 54 aa15.63■□□□□ 0.09
SNX3-203ENST00000368979 SLPIP03973 132 aa15.62■□□□□ 0.09
SNX3-203ENST00000368979 TAX1BP3O14907 124 aa15.61■□□□□ 0.09
SNX3-203ENST00000368979 ALMS1Q8TCU4 4167 aa15.61■□□□□ 0.09
SNX3-203ENST00000368979 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.6■□□□□ 0.09
SNX3-203ENST00000368979 CFC1BP0CG36 223 aa15.6■□□□□ 0.09
SNX3-203ENST00000368979 CFC1P0CG37 223 aa15.6■□□□□ 0.09
SNX3-203ENST00000368979 CARD19Q96LW7 228 aa15.6■□□□□ 0.09
SNX3-203ENST00000368979 LOC107984156A0A0G2JMH3 177 aa15.59■□□□□ 0.09
SNX3-203ENST00000368979 LRCOL1A6NCL2 159 aa15.59■□□□□ 0.09
SNX3-203ENST00000368979 ARL17AQ8IVW1 177 aa15.59■□□□□ 0.09
SNX3-203ENST00000368979 DNAH10Q8IVF4 4471 aa15.59■□□□□ 0.09
SNX3-203ENST00000368979 KMT2CQ8NEZ4 4911 aaKnown RBP15.59■□□□□ 0.09
SNX3-203ENST00000368979 RNF151Q2KHN1 245 aa15.58■□□□□ 0.09
SNX3-203ENST00000368979 A0A0B4J2C4 111 aa15.58■□□□□ 0.08
SNX3-203ENST00000368979 C14orf177Q52M58 125 aa15.58■□□□□ 0.08
SNX3-203ENST00000368979 SND1-IT1Q9HBX3 110 aa15.58■□□□□ 0.08
SNX3-203ENST00000368979 RAB37Q96AX2 223 aa15.56■□□□□ 0.08
SNX3-203ENST00000368979 NDUFC2-KCTD14E9PQ53 114 aa15.54■□□□□ 0.08
SNX3-203ENST00000368979 CNBPP62633 177 aaKnown RBP15.53■□□□□ 0.08
SNX3-203ENST00000368979 C1orf134Q5TEV5 83 aa15.53■□□□□ 0.08
SNX3-203ENST00000368979 TLX1NBP0CAT3 122 aa15.52■□□□□ 0.07
SNX3-203ENST00000368979 DNAH6Q9C0G6 4158 aa15.51■□□□□ 0.07
SNX3-203ENST00000368979 PRO1854Q9UHT4 67 aa15.51■□□□□ 0.07
SNX3-203ENST00000368979 C9orf118A6NHY6 69 aa15.49■□□□□ 0.07
SNX3-203ENST00000368979 Q6ZRP5 223 aa15.49■□□□□ 0.07
SNX3-203ENST00000368979 KMT2AQ03164 3969 aa15.48■□□□□ 0.07
SNX3-203ENST00000368979 IGKV2-28A0A075B6P5 120 aa15.48■□□□□ 0.07
SNX3-203ENST00000368979 NDUFC2O95298 119 aa15.48■□□□□ 0.07
SNX3-203ENST00000368979 IGKV2D-28P01615 120 aa15.48■□□□□ 0.07
SNX3-203ENST00000368979 PGPEP1Q9NXJ5 209 aa15.48■□□□□ 0.07
SNX3-203ENST00000368979 A0A087WTM6 91 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms