RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
CHTOP-204ENST00000368694 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
CHTOP-204ENST00000368694 TSPAN13O95857 204 aa13.14□□□□□ -0.31
CHTOP-204ENST00000368694 NDUFA12Q9UI09 145 aa13.14□□□□□ -0.31
CHTOP-204ENST00000368694 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
CHTOP-204ENST00000368694 PSMB2P49721 201 aa13.13□□□□□ -0.31
CHTOP-204ENST00000368694 ZFAND6Q6FIF0 208 aa13.13□□□□□ -0.31
CHTOP-204ENST00000368694 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 COX7A2LO14548 114 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 SMCPP49901 116 aaPredicted RBP13.12□□□□□ -0.31
CHTOP-204ENST00000368694 MIAQ16674 131 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 UBE2DNLQ8IWF7 75 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 UPK3BQ9BT76 320 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 FBN3Q75N90 2809 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 TRAV8-4A0A0B4J246 113 aa13.12□□□□□ -0.31
CHTOP-204ENST00000368694 CKS1BP61024 79 aa13.11□□□□□ -0.31
CHTOP-204ENST00000368694 MALP21145 153 aa13.11□□□□□ -0.31
CHTOP-204ENST00000368694 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
CHTOP-204ENST00000368694 COX7B2Q8TF08 81 aa13.1□□□□□ -0.31
CHTOP-204ENST00000368694 Q9H8V8 135 aa13.09□□□□□ -0.31
CHTOP-204ENST00000368694 LYSTQ99698 3801 aa13.09□□□□□ -0.31
CHTOP-204ENST00000368694 NDUFA1O15239 70 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 CDIP1Q9H305 208 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 DNAH7Q8WXX0 4024 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 TRBV20-1A0A075B6N2 111 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 A0A0J9YXY3 114 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 LINC01561Q8N1V8 128 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 PPDPFLQ8WWR9 84 aa13.08□□□□□ -0.32
CHTOP-204ENST00000368694 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
CHTOP-204ENST00000368694 C1orf43Q9BWL3 253 aa13.07□□□□□ -0.32
CHTOP-204ENST00000368694 Q9HAA7 133 aa13.07□□□□□ -0.32
CHTOP-204ENST00000368694 DYNC2H1Q8NCM8 4307 aaKnown RBP13.06□□□□□ -0.32
CHTOP-204ENST00000368694 TEN1Q86WV5 123 aa13.06□□□□□ -0.32
CHTOP-204ENST00000368694 PRSS2P07478 247 aa13.06□□□□□ -0.32
CHTOP-204ENST00000368694 IGKV2D-24A0A075B6R9 120 aa13.05□□□□□ -0.32
CHTOP-204ENST00000368694 ZNF625Q96I27 306 aaPredicted RBP13.05□□□□□ -0.32
CHTOP-204ENST00000368694 TCL1BO95988 128 aa13.04□□□□□ -0.32
CHTOP-204ENST00000368694 C6orf226Q5I0X4 101 aa13.04□□□□□ -0.32
CHTOP-204ENST00000368694 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
CHTOP-204ENST00000368694 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
CHTOP-204ENST00000368694 CFC1P0CG37 223 aa13.03□□□□□ -0.32
CHTOP-204ENST00000368694 Q8IZM0 81 aa13.03□□□□□ -0.32
CHTOP-204ENST00000368694 CARD19Q96LW7 228 aa13.02□□□□□ -0.33
CHTOP-204ENST00000368694 HERV-K104P63124 156 aa13.01□□□□□ -0.33
CHTOP-204ENST00000368694 PRO1854Q9UHT4 67 aa13.01□□□□□ -0.33
CHTOP-204ENST00000368694 MT-ATP8P03928 68 aa13.01□□□□□ -0.33
CHTOP-204ENST00000368694 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
CHTOP-204ENST00000368694 MUC7Q8TAX7 377 aa13.01□□□□□ -0.33
CHTOP-204ENST00000368694 STARD9Q9P2P6 4700 aa13.01□□□□□ -0.33
CHTOP-204ENST00000368694 MEIG1Q5JSS6 88 aa13□□□□□ -0.33
CHTOP-204ENST00000368694 KRTAP26-1Q6PEX3 210 aa13□□□□□ -0.33
CHTOP-204ENST00000368694 SCGB1C2P0DMR2 95 aa13□□□□□ -0.33
CHTOP-204ENST00000368694 XGP55808 180 aa13□□□□□ -0.33
CHTOP-204ENST00000368694 CIRBPQ14011 172 aaKnown RBP12.99□□□□□ -0.33
CHTOP-204ENST00000368694 PLECQ15149 4684 aaKnown RBP12.99□□□□□ -0.33
CHTOP-204ENST00000368694 TENM2Q9NT68 2774 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 SPAG11BQ08648 103 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 LITAFQ99732 161 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 TGP01266 2768 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 A0A0U1RRA0 63 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 C2orf82Q6UX34 121 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
CHTOP-204ENST00000368694 KIAA0087Q14695 138 aa12.97□□□□□ -0.33
CHTOP-204ENST00000368694 M0QXV9 152 aa12.97□□□□□ -0.33
CHTOP-204ENST00000368694 TIMM17BO60830 172 aa12.97□□□□□ -0.33
CHTOP-204ENST00000368694 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
CHTOP-204ENST00000368694 RMI2Q96E14 147 aa12.97□□□□□ -0.33
CHTOP-204ENST00000368694 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
CHTOP-204ENST00000368694 CXCL5P42830 114 aa12.95□□□□□ -0.34
CHTOP-204ENST00000368694 DAND5Q8N907 189 aa12.95□□□□□ -0.34
CHTOP-204ENST00000368694 LINC00526Q96FQ7 95 aa12.95□□□□□ -0.34
CHTOP-204ENST00000368694 SPANXDQ9BXN6 97 aa12.95□□□□□ -0.34
CHTOP-204ENST00000368694 KRTAP1-5Q9BYS1 174 aa12.95□□□□□ -0.34
CHTOP-204ENST00000368694 SPANXCQ9NY87 97 aa12.95□□□□□ -0.34
CHTOP-204ENST00000368694 A0A0B4J2C4 111 aa12.94□□□□□ -0.34
CHTOP-204ENST00000368694 A4D1N5 150 aa12.94□□□□□ -0.34
CHTOP-204ENST00000368694 SLC25A20O43772 301 aa12.93□□□□□ -0.34
CHTOP-204ENST00000368694 NPC2P61916 151 aa12.93□□□□□ -0.34
CHTOP-204ENST00000368694 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
CHTOP-204ENST00000368694 C6orf223Q8N319 242 aa12.93□□□□□ -0.34
CHTOP-204ENST00000368694 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
CHTOP-204ENST00000368694 ZNF561-AS1K7EIQ3 104 aa12.92□□□□□ -0.34
CHTOP-204ENST00000368694 MUSTN1Q8IVN3 82 aa12.92□□□□□ -0.34
CHTOP-204ENST00000368694 C15orf56Q8N910 161 aa12.92□□□□□ -0.34
CHTOP-204ENST00000368694 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.91□□□□□ -0.34
CHTOP-204ENST00000368694 C9JAW5 83 aa12.91□□□□□ -0.34
CHTOP-204ENST00000368694 PFN2P35080 140 aa12.91□□□□□ -0.34
CHTOP-204ENST00000368694 LINC00158P58513 81 aa12.91□□□□□ -0.34
CHTOP-204ENST00000368694 EIF4EBP3O60516 100 aaPredicted RBP12.9□□□□□ -0.34
CHTOP-204ENST00000368694 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
CHTOP-204ENST00000368694 DNAH1Q9P2D7 4330 aa12.89□□□□□ -0.35
CHTOP-204ENST00000368694 UNQ6190/PRO20217Q6UXQ8 127 aa12.89□□□□□ -0.35
CHTOP-204ENST00000368694 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
CHTOP-204ENST00000368694 ATXN8Q156A1 80 aa12.88□□□□□ -0.35
CHTOP-204ENST00000368694 CASC10Q5T4H9 136 aa12.88□□□□□ -0.35
CHTOP-204ENST00000368694 NTN5Q8WTR8 489 aaPredicted RBP12.88□□□□□ -0.35
CHTOP-204ENST00000368694 Q1RN00 199 aa12.87□□□□□ -0.35
CHTOP-204ENST00000368694 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms