RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TINCRA0A1B0GVN0 87 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 VSIG2Q96IQ7 327 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 LITAFQ99732 161 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 MDFIQ99750 246 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
TPM3-212ENST00000368533 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
TPM3-212ENST00000368533 C16orf74Q96GX8 76 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 A0A087WVE0 104 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 TRGV4A0A0C4DH28 118 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 X6R8D5 127 aa7.52□□□□□ -1.21
TPM3-212ENST00000368533 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
TPM3-212ENST00000368533 DAZ2Q13117 558 aaKnown RBP7.51□□□□□ -1.21
TPM3-212ENST00000368533 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
TPM3-212ENST00000368533 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
TPM3-212ENST00000368533 FAM222AQ5U5X8 452 aa7.51□□□□□ -1.21
TPM3-212ENST00000368533 MRAPQ8TCY5 172 aa7.51□□□□□ -1.21
TPM3-212ENST00000368533 DPH3Q96FX2 82 aa7.5□□□□□ -1.21
TPM3-212ENST00000368533 CELA1Q9UNI1 258 aa7.5□□□□□ -1.21
TPM3-212ENST00000368533 COX6A2Q02221 97 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 CIRBPQ14011 172 aaKnown RBP7.49□□□□□ -1.21
TPM3-212ENST00000368533 DEFB121Q5J5C9 76 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 LINC00643Q86TS7 51 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 IL17DQ8TAD2 202 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 IGHV4-28A0A0C4DH34 117 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 UBE2L6O14933 153 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 TRACP01848 142 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 Q9H8V8 135 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 A0A1B0GX51 115 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 MIAQ16674 131 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 Q9HAA7 133 aa7.49□□□□□ -1.21
TPM3-212ENST00000368533 LINC01600Q96MT4 127 aa7.48□□□□□ -1.21
TPM3-212ENST00000368533 K7EQD1 137 aa7.48□□□□□ -1.21
TPM3-212ENST00000368533 TIRAPP58753 221 aa7.48□□□□□ -1.21
TPM3-212ENST00000368533 IMUPQ9GZP8 106 aa7.48□□□□□ -1.21
TPM3-212ENST00000368533 APOC4P55056 127 aa7.47□□□□□ -1.21
TPM3-212ENST00000368533 CRYGAP11844 174 aa7.47□□□□□ -1.21
TPM3-212ENST00000368533 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.21
TPM3-212ENST00000368533 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.21
TPM3-212ENST00000368533 TOMM7Q9P0U1 55 aa7.46□□□□□ -1.21
TPM3-212ENST00000368533 WIPF1O43516 503 aa7.46□□□□□ -1.22
TPM3-212ENST00000368533 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
TPM3-212ENST00000368533 Q5XG85 94 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 SPANXCQ9NY87 97 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 DNHD1Q96M86 4753 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 FAM218AQ96MZ4 157 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 FHL2Q14192 279 aa7.45□□□□□ -1.22
TPM3-212ENST00000368533 TMEM243Q9BU79 118 aa7.44□□□□□ -1.22
TPM3-212ENST00000368533 ACYP1P07311 99 aa7.44□□□□□ -1.22
TPM3-212ENST00000368533 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
TPM3-212ENST00000368533 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
TPM3-212ENST00000368533 NDUFA1O15239 70 aa7.43□□□□□ -1.22
TPM3-212ENST00000368533 GYPEP15421 78 aa7.43□□□□□ -1.22
TPM3-212ENST00000368533 DAD1P61803 113 aa7.43□□□□□ -1.22
TPM3-212ENST00000368533 OVOL2Q9BRP0 275 aa7.43□□□□□ -1.22
TPM3-212ENST00000368533 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
TPM3-212ENST00000368533 Q8NAQ8 132 aa7.43□□□□□ -1.22
TPM3-212ENST00000368533 ATOX1O00244 68 aa7.42□□□□□ -1.22
TPM3-212ENST00000368533 LINC00308Q8TCZ7 52 aa7.42□□□□□ -1.22
TPM3-212ENST00000368533 C14orf132Q9NPU4 83 aa7.42□□□□□ -1.22
TPM3-212ENST00000368533 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
TPM3-212ENST00000368533 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
TPM3-212ENST00000368533 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
TPM3-212ENST00000368533 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
TPM3-212ENST00000368533 CLPSL2Q6UWE3 100 aa7.41□□□□□ -1.22
TPM3-212ENST00000368533 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
TPM3-212ENST00000368533 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
TPM3-212ENST00000368533 Q8N3U1 123 aa7.41□□□□□ -1.22
TPM3-212ENST00000368533 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
TPM3-212ENST00000368533 COX7A2LO14548 114 aa7.4□□□□□ -1.22
TPM3-212ENST00000368533 TIMM17BO60830 172 aa7.4□□□□□ -1.23
TPM3-212ENST00000368533 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.23
TPM3-212ENST00000368533 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 PAX4O43316 350 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 LINC01561Q8N1V8 128 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 UPK3BQ9BT76 320 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 C1orf43Q9BWL3 253 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
TPM3-212ENST00000368533 TMEM258P61165 79 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 LINC00336Q6ZUF6 198 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 LINC00846Q9NV44 126 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
TPM3-212ENST00000368533 A0A0J9YWU9 116 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 ATP5G1P05496 136 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 CXCL5P42830 114 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 EGFEM1PQ0D2K5 195 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 USP17L23D6RBM5 183 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 LINC00158P58513 81 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 TRBV6-4A0A1B0GX49 114 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
TPM3-212ENST00000368533 DNAL4O96015 105 aa7.37□□□□□ -1.23
TPM3-212ENST00000368533 IGLV4-60A0A075B6I1 120 aa7.37□□□□□ -1.23
TPM3-212ENST00000368533 SPART-AS1P0CW21 52 aa7.37□□□□□ -1.23
TPM3-212ENST00000368533 MIFP14174 115 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms