RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 DEFB114Q30KQ6 69 aa4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 C10orf99Q6UWK7 81 aa4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 DAZ4Q86SG3 579 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 ARL17AQ8IVW1 177 aa4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 PRR26Q8N8Z3 221 aa4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 KLHL30-AS1Q8NEE0 82 aa4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 DAZ3Q9NR90 486 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-202ENST00000368289 TRAV4A0A0B4J268 109 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 IGHV4-28A0A0C4DH34 117 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 PRSS2P07478 247 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 IGHV3-30-3P0DP02 117 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 PSMB2P49721 201 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 ATXN8Q156A1 80 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 SFTA2Q6UW10 78 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 TMEM263Q8WUH6 116 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 VSIG2Q96IQ7 327 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 LINC01587Q99440 93 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 GEMIN7Q9H840 131 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
ECHDC1-202ENST00000368289 NACAE9PAV3 2078 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 A0A1B0GV72 72 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 HERV-K104P63124 156 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 RPL36AP83881 106 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 C18orf65Q6ZTR6 163 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 C11orf72Q8NBR9 251 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 CHCHD7Q9BUK0 85 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 GTSF1LQ9H1H1 148 aa4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 TSSC4Q9Y5U2 329 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-202ENST00000368289 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 H3BT86 120 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 NDUFA1O15239 70 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 TCL1BO95988 128 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 IGKV3-20P01619 116 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 RPL13AP40429 203 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 MIAQ16674 131 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 MUSTN1Q8IVN3 82 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 STHQ8IWL8 128 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 TMEM61Q8N0U2 210 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 NDUFA12Q9UI09 145 aa4.57□□□□□ -1.68
ECHDC1-202ENST00000368289 TRAV26-1A0A087WT03 109 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 TRBV10-2A0A0K0K1G8 114 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 KNCNA6PVL3 124 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 SLC25A20O43772 301 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 AZU1P20160 251 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 EDN2P20800 178 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 TSPEAR-AS2P59090 65 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 SH2D6Q7Z4S9 175 aa4.56□□□□□ -1.68
ECHDC1-202ENST00000368289 FAM240AA0A1B0GVK7 77 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 RBMY1A1P0DJD3 496 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 RBMY1CP0DJD4 496 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 EMP1P54849 157 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 Q1RN00 199 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 ANKRD29Q8N6D5 301 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 C16orf74Q96GX8 76 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 LITAFQ99732 161 aa4.55□□□□□ -1.68
ECHDC1-202ENST00000368289 TRBV6-4A0A1B0GX49 114 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 K7EQD1 137 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 GAGE7O76087 117 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 ACYP1P07311 99 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 GAGE12FP0CL80 117 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 GAGE12GP0CL81 117 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 GAGE12IP0CL82 117 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 VPREB1P12018 145 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 GAGE4Q13068 117 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 LINC01620Q4KN68 170 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 Q6Q795 121 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 TMEM101Q96IK0 257 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 OVOL2Q9BRP0 275 aa4.54□□□□□ -1.68
ECHDC1-202ENST00000368289 CCL24O00175 119 aa4.53□□□□□ -1.68
ECHDC1-202ENST00000368289 FAM222AQ5U5X8 452 aa4.53□□□□□ -1.68
ECHDC1-202ENST00000368289 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-202ENST00000368289 ICOSQ9Y6W8 199 aa4.53□□□□□ -1.68
ECHDC1-202ENST00000368289 C9JAW5 83 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 HTN1P15515 57 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 LINC00242Q5T6M2 205 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 RETNQ9HD89 108 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 TNXBP22105 4242 aa4.52□□□□□ -1.69
ECHDC1-202ENST00000368289 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 IGHV3-73A0A0B4J1V6 119 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 A0A0U1RRA0 63 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 LST1O00453 97 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 UBE2L6O14933 153 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 TRACP01848 142 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 SPINK8P0C7L1 97 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 Q6ZUT4 128 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 TMEM243Q9BU79 118 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
ECHDC1-202ENST00000368289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms