RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 PTPN13Q12923 2485 aa6.52□□□□□ -1.37
SYNE1-209ENST00000367257 NANOS2P60321 138 aaKnown RBP6.52□□□□□ -1.37
SYNE1-209ENST00000367257 ADAMTS9Q9P2N4 1935 aa6.52□□□□□ -1.37
SYNE1-209ENST00000367257 A0A1W2PNU3 283 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-209ENST00000367257 Q6ZSV7 163 aa6.51□□□□□ -1.37
SYNE1-209ENST00000367257 ZNF702PQ9H963 129 aa6.51□□□□□ -1.37
SYNE1-209ENST00000367257 WFDC10AQ9H1F0 79 aa6.51□□□□□ -1.37
SYNE1-209ENST00000367257 ESM1Q9NQ30 184 aa6.51□□□□□ -1.37
SYNE1-209ENST00000367257 C1orf229Q6ZS94 237 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-209ENST00000367257 NUP210LQ5VU65 1888 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 DEFB1P60022 68 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 SBSPONQ8IVN8 264 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 DCANP1Q8TF63 244 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 LIMD2Q9BT23 127 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 IGKV2-24A0A0C4DH68 120 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 COL5A1P20908 1838 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-209ENST00000367257 C1orf158Q8N1D5 194 aa6.5□□□□□ -1.37
SYNE1-209ENST00000367257 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.49□□□□□ -1.37
SYNE1-209ENST00000367257 AMELXQ99217 191 aa6.49□□□□□ -1.37
SYNE1-209ENST00000367257 ZNF462Q96JM2 2506 aa6.49□□□□□ -1.37
SYNE1-209ENST00000367257 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
SYNE1-209ENST00000367257 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
SYNE1-209ENST00000367257 Q8N814 137 aa6.49□□□□□ -1.37
SYNE1-209ENST00000367257 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
SYNE1-209ENST00000367257 Q8N3U1 123 aa6.48□□□□□ -1.37
SYNE1-209ENST00000367257 FAM30AQ9NZY2 134 aa6.48□□□□□ -1.37
SYNE1-209ENST00000367257 C2CD3Q4AC94 2353 aa6.48□□□□□ -1.37
SYNE1-209ENST00000367257 CELA1Q9UNI1 258 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 A0A096LNJ9 63 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 C22orf34Q6ZV56 151 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 NCOR2Q9Y618 2525 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 FREM1Q5H8C1 2179 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
SYNE1-209ENST00000367257 A0A1B0GUV1 79 aa6.46□□□□□ -1.37
SYNE1-209ENST00000367257 SMIM1B2RUZ4 78 aa6.46□□□□□ -1.37
SYNE1-209ENST00000367257 DEFB4AO15263 64 aa6.46□□□□□ -1.37
SYNE1-209ENST00000367257 BEAN1Q3B7T3 259 aa6.46□□□□□ -1.37
SYNE1-209ENST00000367257 C11orf21Q9P2W6 132 aa6.46□□□□□ -1.37
SYNE1-209ENST00000367257 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
SYNE1-209ENST00000367257 KPRPQ5T749 579 aaPredicted RBP6.46□□□□□ -1.38
SYNE1-209ENST00000367257 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.38
SYNE1-209ENST00000367257 ZNF292O60281 2723 aa6.46□□□□□ -1.38
SYNE1-209ENST00000367257 XAGE1AQ9HD64 81 aa6.46□□□□□ -1.38
SYNE1-209ENST00000367257 ABCA2Q9BZC7 2435 aa6.45□□□□□ -1.38
SYNE1-209ENST00000367257 C3orf84H3BNL1 204 aa6.45□□□□□ -1.38
SYNE1-209ENST00000367257 PRR9Q5T870 116 aa6.44□□□□□ -1.38
SYNE1-209ENST00000367257 POM121L12Q8N7R1 296 aa6.44□□□□□ -1.38
SYNE1-209ENST00000367257 HIVEP2P31629 2446 aa6.44□□□□□ -1.38
SYNE1-209ENST00000367257 TANC2Q9HCD6 1990 aa6.44□□□□□ -1.38
SYNE1-209ENST00000367257 RPL37AP8A6NKH3 93 aa6.43□□□□□ -1.38
SYNE1-209ENST00000367257 MED13Q9UHV7 2174 aa6.43□□□□□ -1.38
SYNE1-209ENST00000367257 HCFC1P51610 2035 aa6.43□□□□□ -1.38
SYNE1-209ENST00000367257 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
SYNE1-209ENST00000367257 WFDC13Q8IUB5 93 aa6.43□□□□□ -1.38
SYNE1-209ENST00000367257 CYSRT1A8MQ03 144 aa6.43□□□□□ -1.38
SYNE1-209ENST00000367257 FN1P02751 2386 aaKnown RBP6.43□□□□□ -1.38
SYNE1-209ENST00000367257 C16orf95Q9H693 158 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 H3BPC8 53 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 NUPR2A6NF83 97 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 FHL2Q14192 279 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 LINC01006Q8NI28 216 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 HIVEP3Q5T1R4 2406 aa6.42□□□□□ -1.38
SYNE1-209ENST00000367257 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
SYNE1-209ENST00000367257 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
SYNE1-209ENST00000367257 FHL3Q13643 280 aa6.41□□□□□ -1.38
SYNE1-209ENST00000367257 IGLV2-18A0A075B6J9 118 aa6.4□□□□□ -1.38
SYNE1-209ENST00000367257 PROK1P58294 105 aa6.4□□□□□ -1.38
SYNE1-209ENST00000367257 ATMQ13315 3056 aa6.4□□□□□ -1.38
SYNE1-209ENST00000367257 ZZEF1O43149 2961 aa6.4□□□□□ -1.38
SYNE1-209ENST00000367257 NBEAQ8NFP9 2946 aa6.4□□□□□ -1.38
SYNE1-209ENST00000367257 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.39
SYNE1-209ENST00000367257 IGKV2D-28P01615 120 aa6.4□□□□□ -1.39
SYNE1-209ENST00000367257 IGLV1-51P01701 117 aa6.4□□□□□ -1.39
SYNE1-209ENST00000367257 Q8N2B8 174 aa6.4□□□□□ -1.39
SYNE1-209ENST00000367257 ANKHD1Q8IWZ3 2542 aaKnown RBP6.4□□□□□ -1.39
SYNE1-209ENST00000367257 C19orf84I3L1E1 186 aa6.39□□□□□ -1.39
SYNE1-209ENST00000367257 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
SYNE1-209ENST00000367257 MDFIQ99750 246 aa6.39□□□□□ -1.39
SYNE1-209ENST00000367257 PRR14LQ5THK1 2151 aa6.39□□□□□ -1.39
SYNE1-209ENST00000367257 A0A087WYN8 130 aa6.39□□□□□ -1.39
SYNE1-209ENST00000367257 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
SYNE1-209ENST00000367257 TP53AIP1Q9HCN2 124 aa6.39□□□□□ -1.39
SYNE1-209ENST00000367257 HCG22E2RYF7 251 aa6.38□□□□□ -1.39
SYNE1-209ENST00000367257 PCSK5Q92824 1860 aa6.38□□□□□ -1.39
SYNE1-209ENST00000367257 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
SYNE1-209ENST00000367257 Q6ZVQ6 151 aa6.38□□□□□ -1.39
SYNE1-209ENST00000367257 TLN2Q9Y4G6 2542 aa6.38□□□□□ -1.39
SYNE1-209ENST00000367257 EXPH5Q8NEV8 1989 aa6.37□□□□□ -1.39
SYNE1-209ENST00000367257 A0A0J9YWU9 116 aa6.37□□□□□ -1.39
SYNE1-209ENST00000367257 ODF3L2Q3SX64 289 aa6.37□□□□□ -1.39
SYNE1-209ENST00000367257 SMG1Q96Q15 3661 aaKnown RBP6.37□□□□□ -1.39
SYNE1-209ENST00000367257 LCA10Q71F78 164 aa6.37□□□□□ -1.39
SYNE1-209ENST00000367257 C8orf87E5RJ46 101 aa6.36□□□□□ -1.39
SYNE1-209ENST00000367257 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
SYNE1-209ENST00000367257 IGLV5-39A0A0G2JS06 123 aa6.36□□□□□ -1.39
SYNE1-209ENST00000367257 IGF2RP11717 2491 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms