RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
SYNE1-204ENST00000367248 ZNF73O43830 326 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-204ENST00000367248 DHRS4-AS1Q9P1J3 65 aa8.2□□□□□ -1.1
SYNE1-204ENST00000367248 CCKP06307 115 aa8.2□□□□□ -1.1
SYNE1-204ENST00000367248 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
SYNE1-204ENST00000367248 C2orf91Q6ZV80 131 aa8.2□□□□□ -1.1
SYNE1-204ENST00000367248 C11orf72Q8NBR9 251 aa8.2□□□□□ -1.1
SYNE1-204ENST00000367248 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
SYNE1-204ENST00000367248 AMELXQ99217 191 aa8.19□□□□□ -1.1
SYNE1-204ENST00000367248 ATOX1O00244 68 aa8.19□□□□□ -1.1
SYNE1-204ENST00000367248 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
SYNE1-204ENST00000367248 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
SYNE1-204ENST00000367248 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
SYNE1-204ENST00000367248 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
SYNE1-204ENST00000367248 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
SYNE1-204ENST00000367248 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
SYNE1-204ENST00000367248 UPK3BQ9BT76 320 aa8.18□□□□□ -1.1
SYNE1-204ENST00000367248 CPAMD8Q8IZJ3 1885 aa8.18□□□□□ -1.1
SYNE1-204ENST00000367248 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
SYNE1-204ENST00000367248 A0A096LNJ9 63 aa8.17□□□□□ -1.1
SYNE1-204ENST00000367248 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
SYNE1-204ENST00000367248 WFDC13Q8IUB5 93 aa8.17□□□□□ -1.1
SYNE1-204ENST00000367248 SEC61GP60059 68 aa8.15□□□□□ -1.1
SYNE1-204ENST00000367248 SMIM11BQ8TCY0 68 aa8.15□□□□□ -1.1
SYNE1-204ENST00000367248 LST1O00453 97 aa8.15□□□□□ -1.1
SYNE1-204ENST00000367248 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.11
SYNE1-204ENST00000367248 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
SYNE1-204ENST00000367248 REG3GQ6UW15 175 aa8.14□□□□□ -1.11
SYNE1-204ENST00000367248 PTPRBP23467 1997 aa8.13□□□□□ -1.11
SYNE1-204ENST00000367248 ESRGQ1W209 222 aa8.13□□□□□ -1.11
SYNE1-204ENST00000367248 TSPEAR-AS2P59090 65 aa8.13□□□□□ -1.11
SYNE1-204ENST00000367248 KLK9Q2XQG4 91 aa8.13□□□□□ -1.11
SYNE1-204ENST00000367248 C5orf42Q9H799 3197 aa8.13□□□□□ -1.11
SYNE1-204ENST00000367248 FAM19A4Q96LR4 140 aa8.13□□□□□ -1.11
SYNE1-204ENST00000367248 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-204ENST00000367248 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 SS18L2Q9UHA2 77 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 X6R8D5 127 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 ATRQ13535 2644 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 LINC00315P59091 139 aa8.12□□□□□ -1.11
SYNE1-204ENST00000367248 FAM236DA0A1B0GTK5 79 aa8.11□□□□□ -1.11
SYNE1-204ENST00000367248 FAM236CP0DP71 79 aa8.11□□□□□ -1.11
SYNE1-204ENST00000367248 ATP5EP2Q5VTU8 51 aa8.11□□□□□ -1.11
SYNE1-204ENST00000367248 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
SYNE1-204ENST00000367248 F8WDY8 70 aa8.1□□□□□ -1.11
SYNE1-204ENST00000367248 PRLHP81277 87 aa8.1□□□□□ -1.11
SYNE1-204ENST00000367248 B5MCH6 92 aa8.1□□□□□ -1.11
SYNE1-204ENST00000367248 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
SYNE1-204ENST00000367248 MAST4O15021 2626 aa8.1□□□□□ -1.11
SYNE1-204ENST00000367248 A0A096LNT2 108 aa8.09□□□□□ -1.11
SYNE1-204ENST00000367248 Q6ZRU5 148 aa8.09□□□□□ -1.11
SYNE1-204ENST00000367248 J3QL48 77 aa8.09□□□□□ -1.11
SYNE1-204ENST00000367248 SDIM1Q6ZPB5 146 aa8.09□□□□□ -1.11
SYNE1-204ENST00000367248 PCSK5Q92824 1860 aa8.08□□□□□ -1.12
SYNE1-204ENST00000367248 TMEM258P61165 79 aa8.08□□□□□ -1.12
SYNE1-204ENST00000367248 LINC01561Q8N1V8 128 aa8.08□□□□□ -1.12
SYNE1-204ENST00000367248 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
SYNE1-204ENST00000367248 ENHOQ6UWT2 76 aa8.08□□□□□ -1.12
SYNE1-204ENST00000367248 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
SYNE1-204ENST00000367248 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
SYNE1-204ENST00000367248 NTM-AS1Q6ZSK4 140 aa8.07□□□□□ -1.12
SYNE1-204ENST00000367248 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
SYNE1-204ENST00000367248 NDUFV3P56181 108 aaKnown RBP8.06□□□□□ -1.12
SYNE1-204ENST00000367248 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
SYNE1-204ENST00000367248 RANBP2P49792 3224 aaKnown RBP8.05□□□□□ -1.12
SYNE1-204ENST00000367248 A8MTW9 85 aa8.05□□□□□ -1.12
SYNE1-204ENST00000367248 Q8N3U1 123 aa8.05□□□□□ -1.12
SYNE1-204ENST00000367248 DEFB116Q30KQ4 102 aa8.05□□□□□ -1.12
SYNE1-204ENST00000367248 NDUFC2O95298 119 aa8.05□□□□□ -1.12
SYNE1-204ENST00000367248 H3BNG1 76 aa8.04□□□□□ -1.12
SYNE1-204ENST00000367248 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
SYNE1-204ENST00000367248 Q6Q795 121 aa8.04□□□□□ -1.12
SYNE1-204ENST00000367248 A0A0C4DFX4 3053 aa8.04□□□□□ -1.12
SYNE1-204ENST00000367248 Q9BRP9 147 aa8.04□□□□□ -1.12
SYNE1-204ENST00000367248 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
SYNE1-204ENST00000367248 BPTFQ12830 3046 aa8.03□□□□□ -1.12
SYNE1-204ENST00000367248 MT-ATP8P03928 68 aa8.03□□□□□ -1.12
SYNE1-204ENST00000367248 HELZ2Q9BYK8 2649 aaKnown RBP8.03□□□□□ -1.12
SYNE1-204ENST00000367248 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.12
SYNE1-204ENST00000367248 PRR4Q16378 134 aa8.02□□□□□ -1.12
SYNE1-204ENST00000367248 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.12
SYNE1-204ENST00000367248 SPACA4Q8TDM5 124 aa8.02□□□□□ -1.12
SYNE1-204ENST00000367248 MKI67P46013 3256 aaKnown RBP8.02□□□□□ -1.12
SYNE1-204ENST00000367248 K7EIL1 84 aa8.02□□□□□ -1.13
SYNE1-204ENST00000367248 RTL8CO15255 209 aa8.02□□□□□ -1.13
SYNE1-204ENST00000367248 NBDYA0A0U1RRE5 68 aa8.02□□□□□ -1.13
SYNE1-204ENST00000367248 KRTAP10-11P60412 298 aa8.01□□□□□ -1.13
SYNE1-204ENST00000367248 Q8NAQ8 132 aa8.01□□□□□ -1.13
SYNE1-204ENST00000367248 Q8N814 137 aa8.01□□□□□ -1.13
SYNE1-204ENST00000367248 LAMA3Q16787 3333 aa8.01□□□□□ -1.13
SYNE1-204ENST00000367248 Q6ZVQ6 151 aa8.01□□□□□ -1.13
SYNE1-204ENST00000367248 FAM19A3Q7Z5A8 133 aa8.01□□□□□ -1.13
SYNE1-204ENST00000367248 C20orf197Q8N268 126 aa8□□□□□ -1.13
SYNE1-204ENST00000367248 C22orf24Q9Y442 160 aa8□□□□□ -1.13
SYNE1-204ENST00000367248 Q9UF83 564 aa8□□□□□ -1.13
SYNE1-204ENST00000367248 LINC00588Q9Y4M8 146 aa7.99□□□□□ -1.13
SYNE1-204ENST00000367248 BRCA2P51587 3418 aa7.99□□□□□ -1.13
SYNE1-204ENST00000367248 COL27A1Q8IZC6 1860 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms