RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 PAX4O43316 350 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 IL17DQ8TAD2 202 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
PRKN-205ENST00000366897 KRTAP1-1Q07627 177 aa9.54□□□□□ -0.88
PRKN-205ENST00000366897 LINC00846Q9NV44 126 aa9.54□□□□□ -0.88
PRKN-205ENST00000366897 J3QLI3 93 aa9.54□□□□□ -0.88
PRKN-205ENST00000366897 FAM222AQ5U5X8 452 aa9.54□□□□□ -0.88
PRKN-205ENST00000366897 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
PRKN-205ENST00000366897 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
PRKN-205ENST00000366897 UQCRQO14949 82 aa9.53□□□□□ -0.88
PRKN-205ENST00000366897 hADV29S1A0JD25 119 aa9.53□□□□□ -0.88
PRKN-205ENST00000366897 FSHBP01225 129 aa9.53□□□□□ -0.88
PRKN-205ENST00000366897 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
PRKN-205ENST00000366897 TRGV4A0A0C4DH28 118 aa9.52□□□□□ -0.89
PRKN-205ENST00000366897 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
PRKN-205ENST00000366897 INAFM1C9JVW0 142 aa9.51□□□□□ -0.89
PRKN-205ENST00000366897 LINC00526Q96FQ7 95 aa9.51□□□□□ -0.89
PRKN-205ENST00000366897 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
PRKN-205ENST00000366897 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
PRKN-205ENST00000366897 C2orf48Q96LS8 159 aa9.5□□□□□ -0.89
PRKN-205ENST00000366897 XCL1P47992 114 aa9.5□□□□□ -0.89
PRKN-205ENST00000366897 COX7CP15954 63 aa9.49□□□□□ -0.89
PRKN-205ENST00000366897 A0A096LPF7 62 aa9.49□□□□□ -0.89
PRKN-205ENST00000366897 A0A1B0GX51 115 aa9.49□□□□□ -0.89
PRKN-205ENST00000366897 PF4P02776 101 aa9.49□□□□□ -0.89
PRKN-205ENST00000366897 CCL24O00175 119 aa9.49□□□□□ -0.89
PRKN-205ENST00000366897 WFDC9Q8NEX5 89 aa9.49□□□□□ -0.89
PRKN-205ENST00000366897 CXCL5P42830 114 aa9.48□□□□□ -0.89
PRKN-205ENST00000366897 DEFB130BP0DP73 79 aa9.48□□□□□ -0.89
PRKN-205ENST00000366897 DEFB130AP0DP74 79 aa9.48□□□□□ -0.89
PRKN-205ENST00000366897 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
PRKN-205ENST00000366897 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
PRKN-205ENST00000366897 TRBV6-8A0A0A6YYG3 113 aa9.47□□□□□ -0.89
PRKN-205ENST00000366897 RNASE1P07998 156 aaKnown RBP9.47□□□□□ -0.89
PRKN-205ENST00000366897 HILS1P60008 231 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 HIST1H4AP62805 103 aaKnown RBP9.45□□□□□ -0.9
PRKN-205ENST00000366897 SS18Q15532 418 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 IBA57-AS1B1ANH7 110 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 LINC01561Q8N1V8 128 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 A0A087WZ39 114 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 H0YGX0 51 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 ATOX1O00244 68 aa9.45□□□□□ -0.9
PRKN-205ENST00000366897 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
PRKN-205ENST00000366897 LINC00959A0A1B0GUT2 108 aa9.44□□□□□ -0.9
PRKN-205ENST00000366897 FHL2Q14192 279 aa9.44□□□□□ -0.9
PRKN-205ENST00000366897 KIR2DL5BQ8NHK3 375 aa9.44□□□□□ -0.9
PRKN-205ENST00000366897 TRBV6-4A0A1B0GX49 114 aa9.44□□□□□ -0.9
PRKN-205ENST00000366897 ATRQ13535 2644 aa9.44□□□□□ -0.9
PRKN-205ENST00000366897 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
PRKN-205ENST00000366897 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
PRKN-205ENST00000366897 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
PRKN-205ENST00000366897 Q8N3U1 123 aa9.42□□□□□ -0.9
PRKN-205ENST00000366897 FBN1P35555 2871 aaKnown RBP9.42□□□□□ -0.9
PRKN-205ENST00000366897 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
PRKN-205ENST00000366897 ORMDL1Q9P0S3 153 aa9.42□□□□□ -0.9
PRKN-205ENST00000366897 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
PRKN-205ENST00000366897 USP17L23D6RBM5 183 aa9.42□□□□□ -0.9
PRKN-205ENST00000366897 ESM1Q9NQ30 184 aa9.42□□□□□ -0.9
PRKN-205ENST00000366897 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
PRKN-205ENST00000366897 TRAV25A0A0B4J276 109 aa9.41□□□□□ -0.9
PRKN-205ENST00000366897 Q6JHZ5 121 aa9.41□□□□□ -0.9
PRKN-205ENST00000366897 CRYGAP11844 174 aa9.41□□□□□ -0.9
PRKN-205ENST00000366897 GYPEP15421 78 aa9.4□□□□□ -0.9
PRKN-205ENST00000366897 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
PRKN-205ENST00000366897 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.91
PRKN-205ENST00000366897 FAM19A1Q7Z5A9 133 aa9.39□□□□□ -0.91
PRKN-205ENST00000366897 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
PRKN-205ENST00000366897 CSNK1G2-AS1Q8NCQ2 148 aa9.39□□□□□ -0.91
PRKN-205ENST00000366897 TRAV23DV6A0A075B6W5 121 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 VWFP04275 2813 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 J3KT08 172 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
PRKN-205ENST00000366897 Q8NDZ9 215 aa9.37□□□□□ -0.91
PRKN-205ENST00000366897 TMEM86BQ8N661 226 aa9.37□□□□□ -0.91
PRKN-205ENST00000366897 CCKP06307 115 aa9.36□□□□□ -0.91
PRKN-205ENST00000366897 DEFB4AO15263 64 aa9.36□□□□□ -0.91
PRKN-205ENST00000366897 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
PRKN-205ENST00000366897 Q8N814 137 aa9.35□□□□□ -0.91
PRKN-205ENST00000366897 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
PRKN-205ENST00000366897 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
PRKN-205ENST00000366897 LINC00269Q8N2A0 174 aa9.35□□□□□ -0.91
PRKN-205ENST00000366897 OXTP01178 125 aa9.34□□□□□ -0.91
PRKN-205ENST00000366897 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
PRKN-205ENST00000366897 GHRHP01286 108 aa9.33□□□□□ -0.92
PRKN-205ENST00000366897 M0R2N4 97 aa9.33□□□□□ -0.92
PRKN-205ENST00000366897 Q8IZM0 81 aa9.32□□□□□ -0.92
PRKN-205ENST00000366897 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
PRKN-205ENST00000366897 MDFIQ99750 246 aa9.32□□□□□ -0.92
PRKN-205ENST00000366897 IGLV1-51P01701 117 aa9.32□□□□□ -0.92
PRKN-205ENST00000366897 DNHD1Q96M86 4753 aa9.31□□□□□ -0.92
PRKN-205ENST00000366897 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
PRKN-205ENST00000366897 C6orf223Q8N319 242 aa9.31□□□□□ -0.92
PRKN-205ENST00000366897 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms