RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 Q8IZM0 81 aa-0.15□□□□□ -2.43
RNU4-48P-201ENST00000365559 DEFB104AQ8WTQ1 72 aa-0.15□□□□□ -2.43
RNU4-48P-201ENST00000365559 AQP10Q96PS8 301 aa-0.15□□□□□ -2.43
RNU4-48P-201ENST00000365559 TMEM191AQ9H0A3 160 aa-0.15□□□□□ -2.43
RNU4-48P-201ENST00000365559 R4GMQ9 66 aa-0.15□□□□□ -2.43
RNU4-48P-201ENST00000365559 GRIN2AQ12879 1464 aa-0.16□□□□□ -2.43
RNU4-48P-201ENST00000365559 SLIT1O75093 1534 aa-0.16□□□□□ -2.43
RNU4-48P-201ENST00000365559 ASXL1Q8IXJ9 1541 aa-0.16□□□□□ -2.43
RNU4-48P-201ENST00000365559 ACACAQ13085 2346 aa-0.16□□□□□ -2.43
RNU4-48P-201ENST00000365559 KNL1Q8NG31 2342 aa-0.16□□□□□ -2.43
RNU4-48P-201ENST00000365559 TET3O43151 1660 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 FXYD6-FXYD2A0A087WZ82 144 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 TRAV13-2A0A0B4J235 113 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 PIGBOS1A0A0B4J2F0 54 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 K7EP34 96 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 SIX6O95475 246 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 MT1EP04732 61 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB1P60022 68 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 SPAG11BQ08648 103 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 ALX1Q15699 326 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 COX6B2Q6YFQ2 88 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 SMIM4Q8WVI0 70 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 PFDN5Q99471 154 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 PDCD10Q9BUL8 212 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 V9GYH0 126 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 C10orf71Q711Q0 1435 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 SMARCA2P51531 1590 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 BICRAQ9NZM4 1560 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 MAGI2Q86UL8 1455 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 BCL9LQ86UU0 1499 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 SHROOM2Q13796 1616 aa-0.16□□□□□ -2.44
RNU4-48P-201ENST00000365559 CUL7Q14999 1698 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 RIMS1Q86UR5 1692 aaKnown RBP-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 HCG22E2RYF7 251 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 K7EQZ3 153 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 M0R135 149 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 BCE1O60756 84 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 SPRR1AP35321 89 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 C10orf128Q5T292 105 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 SPAG11AQ6PDA7 123 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 COPS9Q8WXC6 57 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 MT1LQ93083 61 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 SDF2Q99470 211 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 AGPAT4-IT1Q9H0P7 198 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 DPH3P1Q9H4G8 78 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 TP53AIP1Q9HCN2 124 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 CCDC167Q9P0B6 97 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 LENEPQ9Y5L5 61 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 CFTRP13569 1480 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 MBD5Q9P267 1494 aa-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 URB1O60287 2271 aaKnown RBP-0.17□□□□□ -2.44
RNU4-48P-201ENST00000365559 ROBO1Q9Y6N7 1651 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 ANKRD36A6QL64 1941 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 PPIP5K1Q6PFW1 1433 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB4AO15263 64 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 PRM1P04553 51 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 HIST1H1DP16402 221 aaKnown RBP-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 ARPC4P59998 168 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 DCDP81605 110 aaKnown RBP-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 COX17Q14061 63 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 KRTAP19-2Q3LHN2 52 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 KRTAP19-5Q3LI72 72 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 TMEM170BQ5T4T1 132 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 C12orf73Q69YU5 71 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 TTC9CQ8N5M4 171 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 FDCSPQ8NFU4 85 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 TTTY10Q9BZA0 68 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 RAPGEF6Q8TEU7 1601 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 MED14O60244 1454 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 SCN7AQ01118 1682 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 DNAJC13O75165 2243 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 GOLGA4Q13439 2230 aaKnown RBP-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 NUP188Q5SRE5 1749 aa-0.18□□□□□ -2.44
RNU4-48P-201ENST00000365559 CDC42BPGQ6DT37 1551 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 TRBV6-1A0A0K0K1D8 114 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 LOC105371267A0A1B0GV96 52 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 C20orf202A1L168 122 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 FAM25AB3EWG3 89 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 FAM25CB3EWG5 89 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 FAM25GB3EWG6 89 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 LOC730098B7Z3J9 87 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 I3L2K1 104 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 APOC3P02656 99 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 PIGYQ3MUY2 71 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB121Q5J5C9 76 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 DEFB123Q8N688 67 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 Q8N8P6 123 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 ADGRL2O95490 1459 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 IQSEC2Q5JU85 1478 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 C1orf167Q5SNV9 1468 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 MYOM1P52179 1685 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 COL4A6Q14031 1691 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 PDCD11Q14690 1871 aaKnown RBP-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 ARHGEF12Q9NZN5 1544 aa-0.19□□□□□ -2.44
RNU4-48P-201ENST00000365559 QRICH2Q9H0J4 1663 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 ATP10BO94823 1461 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 NKTRP30414 1462 aaKnown RBP-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 WDR7Q9Y4E6 1490 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 LINC00959A0A1B0GUT2 108 aa-0.2□□□□□ -2.44
RNU4-48P-201ENST00000365559 H3BNG1 76 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms