RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
NLE1-201ENST00000360831 PRO0255Q9UI72 69 aa12.59□□□□□ -0.39
NLE1-201ENST00000360831 IGKV3OR2-268A0A0C4DH90 116 aa12.58□□□□□ -0.4
NLE1-201ENST00000360831 LINC00959A0A1B0GUT2 108 aa12.58□□□□□ -0.4
NLE1-201ENST00000360831 A0A1B0GUV1 79 aa12.58□□□□□ -0.4
NLE1-201ENST00000360831 COX7A2LO14548 114 aa12.58□□□□□ -0.4
NLE1-201ENST00000360831 UBE2WQ96B02 151 aa12.58□□□□□ -0.4
NLE1-201ENST00000360831 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
NLE1-201ENST00000360831 XGP55808 180 aa12.57□□□□□ -0.4
NLE1-201ENST00000360831 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
NLE1-201ENST00000360831 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
NLE1-201ENST00000360831 TOMM7Q9P0U1 55 aa12.55□□□□□ -0.4
NLE1-201ENST00000360831 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 MIR7-3HGQ8N6C7 128 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 TEX49A0A1B0GTD5 131 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 PAX4O43316 350 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 C5orf38Q86SI9 138 aa12.54□□□□□ -0.4
NLE1-201ENST00000360831 APOC4P55056 127 aa12.53□□□□□ -0.4
NLE1-201ENST00000360831 SS18Q15532 418 aa12.53□□□□□ -0.4
NLE1-201ENST00000360831 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
NLE1-201ENST00000360831 TRACP01848 142 aa12.51□□□□□ -0.41
NLE1-201ENST00000360831 LINC00158P58513 81 aa12.51□□□□□ -0.41
NLE1-201ENST00000360831 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
NLE1-201ENST00000360831 SND1-IT1Q9HBX3 110 aa12.51□□□□□ -0.41
NLE1-201ENST00000360831 IGKV2-28A0A075B6P5 120 aa12.49□□□□□ -0.41
NLE1-201ENST00000360831 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
NLE1-201ENST00000360831 IGKV2D-28P01615 120 aa12.49□□□□□ -0.41
NLE1-201ENST00000360831 CRPP02741 224 aa12.49□□□□□ -0.41
NLE1-201ENST00000360831 CCL18P55774 89 aa12.49□□□□□ -0.41
NLE1-201ENST00000360831 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
NLE1-201ENST00000360831 DEFB135Q30KP9 77 aa12.48□□□□□ -0.41
NLE1-201ENST00000360831 LINC00337Q8N6G1 96 aa12.48□□□□□ -0.41
NLE1-201ENST00000360831 Q8IZM0 81 aa12.47□□□□□ -0.41
NLE1-201ENST00000360831 TRAV26-1A0A087WT03 109 aa12.46□□□□□ -0.41
NLE1-201ENST00000360831 XCL1P47992 114 aa12.46□□□□□ -0.41
NLE1-201ENST00000360831 DAD1P61803 113 aa12.46□□□□□ -0.41
NLE1-201ENST00000360831 C6orf226Q5I0X4 101 aa12.46□□□□□ -0.41
NLE1-201ENST00000360831 NHLRC4P0CG21 123 aaPredicted RBP12.45□□□□□ -0.42
NLE1-201ENST00000360831 MIFP14174 115 aa12.45□□□□□ -0.42
NLE1-201ENST00000360831 A0A096LPF7 62 aa12.45□□□□□ -0.42
NLE1-201ENST00000360831 FAM240AA0A1B0GVK7 77 aa12.45□□□□□ -0.42
NLE1-201ENST00000360831 Q8NAQ8 132 aa12.45□□□□□ -0.42
NLE1-201ENST00000360831 TM2D3Q9BRN9 247 aa12.45□□□□□ -0.42
NLE1-201ENST00000360831 MRPL23Q16540 153 aaKnown RBP12.44□□□□□ -0.42
NLE1-201ENST00000360831 A0A1B0GV72 72 aa12.43□□□□□ -0.42
NLE1-201ENST00000360831 DEFB4AO15263 64 aa12.43□□□□□ -0.42
NLE1-201ENST00000360831 FAM218AQ96MZ4 157 aa12.43□□□□□ -0.42
NLE1-201ENST00000360831 ATP5G1P05496 136 aa12.42□□□□□ -0.42
NLE1-201ENST00000360831 PFN2P35080 140 aa12.42□□□□□ -0.42
NLE1-201ENST00000360831 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
NLE1-201ENST00000360831 BAALC-AS2P0C853 105 aa12.42□□□□□ -0.42
NLE1-201ENST00000360831 CKS1BP61024 79 aa12.42□□□□□ -0.42
NLE1-201ENST00000360831 RETNQ9HD89 108 aa12.42□□□□□ -0.42
NLE1-201ENST00000360831 SMIM11BQ8TCY0 68 aa12.41□□□□□ -0.42
NLE1-201ENST00000360831 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
NLE1-201ENST00000360831 LINC00269Q8N2A0 174 aa12.4□□□□□ -0.42
NLE1-201ENST00000360831 CELA1Q9UNI1 258 aa12.4□□□□□ -0.42
NLE1-201ENST00000360831 H0YGX0 51 aa12.4□□□□□ -0.43
NLE1-201ENST00000360831 SPART-AS1P0CW21 52 aa12.4□□□□□ -0.43
NLE1-201ENST00000360831 KIAA0087Q14695 138 aa12.4□□□□□ -0.43
NLE1-201ENST00000360831 CHCHD10Q8WYQ3 142 aaPredicted RBP12.4□□□□□ -0.43
NLE1-201ENST00000360831 SNCGO76070 127 aa12.39□□□□□ -0.43
NLE1-201ENST00000360831 C15orf53Q8NAA6 179 aa12.39□□□□□ -0.43
NLE1-201ENST00000360831 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
NLE1-201ENST00000360831 C22orf24Q9Y442 160 aa12.39□□□□□ -0.43
NLE1-201ENST00000360831 CXCL5P42830 114 aa12.38□□□□□ -0.43
NLE1-201ENST00000360831 Q6Q795 121 aa12.38□□□□□ -0.43
NLE1-201ENST00000360831 ACYP1P07311 99 aa12.37□□□□□ -0.43
NLE1-201ENST00000360831 REG3AQ06141 175 aa12.37□□□□□ -0.43
NLE1-201ENST00000360831 ANGP03950 147 aaKnown RBP12.36□□□□□ -0.43
NLE1-201ENST00000360831 LELP1Q5T871 98 aa12.36□□□□□ -0.43
NLE1-201ENST00000360831 DNAH9Q9NYC9 4486 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 COX17Q14061 63 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 GAGE2EQ4V326 116 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 CFAP161Q6P656 301 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 GAGE2DQ9UEU5 116 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
NLE1-201ENST00000360831 Q8N3U1 123 aa12.34□□□□□ -0.43
NLE1-201ENST00000360831 COL7A1Q02388 2944 aa12.34□□□□□ -0.43
NLE1-201ENST00000360831 MALP21145 153 aa12.34□□□□□ -0.43
NLE1-201ENST00000360831 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
NLE1-201ENST00000360831 A0A087WYN8 130 aa12.32□□□□□ -0.44
NLE1-201ENST00000360831 NDUFC2O95298 119 aa12.32□□□□□ -0.44
NLE1-201ENST00000360831 OR13C6PQ8NH95 151 aa12.32□□□□□ -0.44
NLE1-201ENST00000360831 Q9HAA7 133 aa12.32□□□□□ -0.44
NLE1-201ENST00000360831 TGP01266 2768 aa12.31□□□□□ -0.44
NLE1-201ENST00000360831 IGLV10-54A0A075B6I4 117 aa12.3□□□□□ -0.44
NLE1-201ENST00000360831 INAFM2P0DMQ5 153 aa12.3□□□□□ -0.44
NLE1-201ENST00000360831 HTN3P15516 51 aa12.3□□□□□ -0.44
NLE1-201ENST00000360831 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
NLE1-201ENST00000360831 DNAL4O96015 105 aa12.28□□□□□ -0.44
NLE1-201ENST00000360831 TTC32Q5I0X7 151 aa12.28□□□□□ -0.44
NLE1-201ENST00000360831 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
NLE1-201ENST00000360831 TENM3Q9P273 2699 aa12.28□□□□□ -0.44
NLE1-201ENST00000360831 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
NLE1-201ENST00000360831 NANOS2P60321 138 aaKnown RBP12.27□□□□□ -0.45
NLE1-201ENST00000360831 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms