RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 Q8IZM0 81 aa10.24□□□□□ -0.77
GABPB1-202ENST00000359031 PRKDCP78527 4128 aaKnown RBP10.24□□□□□ -0.77
GABPB1-202ENST00000359031 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
GABPB1-202ENST00000359031 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
GABPB1-202ENST00000359031 C11orf68Q9H3H3 251 aaKnown RBP10.23□□□□□ -0.77
GABPB1-202ENST00000359031 NOTCH1P46531 2555 aa10.23□□□□□ -0.77
GABPB1-202ENST00000359031 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
GABPB1-202ENST00000359031 REG3AQ06141 175 aa10.22□□□□□ -0.77
GABPB1-202ENST00000359031 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
GABPB1-202ENST00000359031 H3BNG1 76 aa10.22□□□□□ -0.77
GABPB1-202ENST00000359031 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
GABPB1-202ENST00000359031 TEN1Q86WV5 123 aa10.22□□□□□ -0.77
GABPB1-202ENST00000359031 RETNQ9HD89 108 aa10.22□□□□□ -0.77
GABPB1-202ENST00000359031 C9JAW5 83 aa10.21□□□□□ -0.78
GABPB1-202ENST00000359031 SLC25A20O43772 301 aa10.21□□□□□ -0.78
GABPB1-202ENST00000359031 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.78
GABPB1-202ENST00000359031 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
GABPB1-202ENST00000359031 COX7A2LO14548 114 aa10.2□□□□□ -0.78
GABPB1-202ENST00000359031 LINC00158P58513 81 aa10.2□□□□□ -0.78
GABPB1-202ENST00000359031 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
GABPB1-202ENST00000359031 CXCL5P42830 114 aa10.19□□□□□ -0.78
GABPB1-202ENST00000359031 FOXI1Q12951 378 aa10.19□□□□□ -0.78
GABPB1-202ENST00000359031 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
GABPB1-202ENST00000359031 TRAV13-2A0A0B4J235 113 aa10.18□□□□□ -0.78
GABPB1-202ENST00000359031 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
GABPB1-202ENST00000359031 LST1O00453 97 aa10.18□□□□□ -0.78
GABPB1-202ENST00000359031 Q8N3U1 123 aa10.18□□□□□ -0.78
GABPB1-202ENST00000359031 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
GABPB1-202ENST00000359031 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
GABPB1-202ENST00000359031 CRPP02741 224 aa10.17□□□□□ -0.78
GABPB1-202ENST00000359031 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
GABPB1-202ENST00000359031 CFAP161Q6P656 301 aa10.16□□□□□ -0.78
GABPB1-202ENST00000359031 LYPD5Q6UWN5 251 aa10.16□□□□□ -0.78
GABPB1-202ENST00000359031 PRR34Q9NV39 138 aa10.16□□□□□ -0.78
GABPB1-202ENST00000359031 MALP21145 153 aa10.15□□□□□ -0.78
GABPB1-202ENST00000359031 CCL18P55774 89 aa10.15□□□□□ -0.78
GABPB1-202ENST00000359031 CKS1BP61024 79 aa10.15□□□□□ -0.78
GABPB1-202ENST00000359031 CMYA5Q8N3K9 4069 aa10.15□□□□□ -0.78
GABPB1-202ENST00000359031 IGLV10-54A0A075B6I4 117 aa10.15□□□□□ -0.79
GABPB1-202ENST00000359031 H3BT86 120 aa10.15□□□□□ -0.79
GABPB1-202ENST00000359031 PFN2P35080 140 aa10.15□□□□□ -0.79
GABPB1-202ENST00000359031 KIAA0087Q14695 138 aa10.15□□□□□ -0.79
GABPB1-202ENST00000359031 MRAPQ8TCY5 172 aa10.15□□□□□ -0.79
GABPB1-202ENST00000359031 CLEC2BQ92478 149 aa10.15□□□□□ -0.79
GABPB1-202ENST00000359031 KPRPQ5T749 579 aaPredicted RBP10.14□□□□□ -0.79
GABPB1-202ENST00000359031 Q6ZTC4 211 aa10.14□□□□□ -0.79
GABPB1-202ENST00000359031 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
GABPB1-202ENST00000359031 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
GABPB1-202ENST00000359031 COX17Q14061 63 aa10.13□□□□□ -0.79
GABPB1-202ENST00000359031 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
GABPB1-202ENST00000359031 LINC00337Q8N6G1 96 aa10.12□□□□□ -0.79
GABPB1-202ENST00000359031 CARD19Q96LW7 228 aa10.12□□□□□ -0.79
GABPB1-202ENST00000359031 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
GABPB1-202ENST00000359031 NBEAL2Q6ZNJ1 2754 aa10.12□□□□□ -0.79
GABPB1-202ENST00000359031 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
GABPB1-202ENST00000359031 C2orf82Q6UX34 121 aa10.11□□□□□ -0.79
GABPB1-202ENST00000359031 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
GABPB1-202ENST00000359031 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
GABPB1-202ENST00000359031 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
GABPB1-202ENST00000359031 TRAV8-4A0A0B4J246 113 aa10.1□□□□□ -0.79
GABPB1-202ENST00000359031 ENHOQ6UWT2 76 aa10.1□□□□□ -0.79
GABPB1-202ENST00000359031 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
GABPB1-202ENST00000359031 MUC7Q8TAX7 377 aa10.09□□□□□ -0.79
GABPB1-202ENST00000359031 TRACP01848 142 aa10.08□□□□□ -0.8
GABPB1-202ENST00000359031 PCP4P48539 62 aa10.08□□□□□ -0.8
GABPB1-202ENST00000359031 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
GABPB1-202ENST00000359031 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-202ENST00000359031 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
GABPB1-202ENST00000359031 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
GABPB1-202ENST00000359031 DEFB131BA0A096LNP1 70 aa10.07□□□□□ -0.8
GABPB1-202ENST00000359031 NDUFC2O95298 119 aa10.07□□□□□ -0.8
GABPB1-202ENST00000359031 NANOS2P60321 138 aaKnown RBP10.07□□□□□ -0.8
GABPB1-202ENST00000359031 DNAH3Q8TD57 4116 aa10.06□□□□□ -0.8
GABPB1-202ENST00000359031 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
GABPB1-202ENST00000359031 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
GABPB1-202ENST00000359031 ESRGQ1W209 222 aa10.04□□□□□ -0.8
GABPB1-202ENST00000359031 KMT2CQ8NEZ4 4911 aaKnown RBP10.03□□□□□ -0.8
GABPB1-202ENST00000359031 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-202ENST00000359031 H0YGX0 51 aa10.03□□□□□ -0.8
GABPB1-202ENST00000359031 TM2D3Q9BRN9 247 aa10.03□□□□□ -0.8
GABPB1-202ENST00000359031 LINC01556Q5JQF7 62 aa10.02□□□□□ -0.81
GABPB1-202ENST00000359031 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.81
GABPB1-202ENST00000359031 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.81
GABPB1-202ENST00000359031 CDIP1Q9H305 208 aa10.02□□□□□ -0.81
GABPB1-202ENST00000359031 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
GABPB1-202ENST00000359031 TRAV10A0A0B4J240 114 aa10□□□□□ -0.81
GABPB1-202ENST00000359031 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
GABPB1-202ENST00000359031 DEFB121Q5J5C9 76 aa10□□□□□ -0.81
GABPB1-202ENST00000359031 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
GABPB1-202ENST00000359031 C6orf223Q8N319 242 aa10□□□□□ -0.81
GABPB1-202ENST00000359031 C10orf25Q5T742 122 aa10□□□□□ -0.81
GABPB1-202ENST00000359031 C15orf53Q8NAA6 179 aa10□□□□□ -0.81
GABPB1-202ENST00000359031 K7EIL1 84 aa9.99□□□□□ -0.81
GABPB1-202ENST00000359031 SCGB1A1P11684 91 aa9.99□□□□□ -0.81
GABPB1-202ENST00000359031 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
GABPB1-202ENST00000359031 RYR3Q15413 4870 aa9.97□□□□□ -0.81
GABPB1-202ENST00000359031 DNAL4O96015 105 aa9.97□□□□□ -0.81
GABPB1-202ENST00000359031 TMEM126AQ9H061 195 aa9.97□□□□□ -0.81
GABPB1-202ENST00000359031 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.81
GABPB1-202ENST00000359031 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms