RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PRR34Q9NV39 138 aa7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 A0A1B0GV90 55 aa7.34□□□□□ -1.23
TRAPPC4-201ENST00000359005 CKS1BP61024 79 aa7.34□□□□□ -1.23
TRAPPC4-201ENST00000359005 LINC01556Q5JQF7 62 aa7.34□□□□□ -1.23
TRAPPC4-201ENST00000359005 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
TRAPPC4-201ENST00000359005 KLK12Q9UKR0 248 aa7.34□□□□□ -1.23
TRAPPC4-201ENST00000359005 KLK5Q9Y337 293 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC4-201ENST00000359005 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.24
TRAPPC4-201ENST00000359005 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 IGHV3-30P01768 117 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 IGHV3-30-5P0DP03 117 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 FXYD2P54710 66 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 ESRGQ1W209 222 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 RAB37Q96AX2 223 aa7.33□□□□□ -1.24
TRAPPC4-201ENST00000359005 NUPR2A6NF83 97 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 IBA57-AS1B1ANH7 110 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 IGLL5B9A064 214 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 TAX1BP3O14907 124 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 IGHV3-33P01772 117 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 CLPSL2Q6UWE3 100 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 GTF2H5Q6ZYL4 71 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 FAT2Q9NYQ8 4349 aa7.32□□□□□ -1.24
TRAPPC4-201ENST00000359005 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 F8WDY8 70 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 FABP2P12104 132 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 COX17Q14061 63 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 VAMP3Q15836 100 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
TRAPPC4-201ENST00000359005 GAGE12HA6NDE8 117 aa7.3□□□□□ -1.24
TRAPPC4-201ENST00000359005 WFDC10BQ8IUB3 73 aa7.3□□□□□ -1.24
TRAPPC4-201ENST00000359005 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
TRAPPC4-201ENST00000359005 UPK3BQ9BT76 320 aa7.3□□□□□ -1.24
TRAPPC4-201ENST00000359005 IGLV10-54A0A075B6I4 117 aa7.29□□□□□ -1.24
TRAPPC4-201ENST00000359005 A0A0B4J2C4 111 aa7.29□□□□□ -1.24
TRAPPC4-201ENST00000359005 FOXI1Q12951 378 aa7.29□□□□□ -1.24
TRAPPC4-201ENST00000359005 PRO1854Q9UHT4 67 aa7.29□□□□□ -1.24
TRAPPC4-201ENST00000359005 LINC00158P58513 81 aa7.28□□□□□ -1.24
TRAPPC4-201ENST00000359005 ENHOQ6UWT2 76 aa7.28□□□□□ -1.24
TRAPPC4-201ENST00000359005 UBE2DNLQ8IWF7 75 aa7.28□□□□□ -1.24
TRAPPC4-201ENST00000359005 DNAH17Q9UFH2 4485 aa7.28□□□□□ -1.24
TRAPPC4-201ENST00000359005 A4D1N5 150 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 GAGE10A6NGK3 116 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 H3BUT2 72 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 ZNF561-AS1K7EIQ3 104 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 LINC00476Q8WZB0 136 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 LITAFQ99732 161 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 ERG28Q9UKR5 140 aa7.27□□□□□ -1.25
TRAPPC4-201ENST00000359005 A0A1W2PPM0 123 aa7.26□□□□□ -1.25
TRAPPC4-201ENST00000359005 COX6CP09669 75 aa7.26□□□□□ -1.25
TRAPPC4-201ENST00000359005 SPAG11BQ08648 103 aa7.26□□□□□ -1.25
TRAPPC4-201ENST00000359005 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
TRAPPC4-201ENST00000359005 LINC00588Q9Y4M8 146 aa7.26□□□□□ -1.25
TRAPPC4-201ENST00000359005 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
TRAPPC4-201ENST00000359005 LY6G6CO95867 125 aa7.25□□□□□ -1.25
TRAPPC4-201ENST00000359005 UBE2V1Q13404 147 aa7.25□□□□□ -1.25
TRAPPC4-201ENST00000359005 Q1RN00 199 aa7.25□□□□□ -1.25
TRAPPC4-201ENST00000359005 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
TRAPPC4-201ENST00000359005 IGKV2D-24A0A075B6R9 120 aa7.24□□□□□ -1.25
TRAPPC4-201ENST00000359005 TRAV13-2A0A0B4J235 113 aa7.24□□□□□ -1.25
TRAPPC4-201ENST00000359005 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
TRAPPC4-201ENST00000359005 CFC1P0CG37 223 aa7.24□□□□□ -1.25
TRAPPC4-201ENST00000359005 ADAMTSL4-AS1Q5T5F5 129 aa7.24□□□□□ -1.25
TRAPPC4-201ENST00000359005 C2orf48Q96LS8 159 aa7.24□□□□□ -1.25
TRAPPC4-201ENST00000359005 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 TRBV30A0A0K0K1B3 111 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 K7ERJ3 54 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 SCGB1C2P0DMR2 95 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 PSMB2P49721 201 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 TTC32Q5I0X7 151 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 Q8N3U1 123 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 MIR7-3HGQ8N6C7 128 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 SPCS1Q9Y6A9 102 aa7.23□□□□□ -1.25
TRAPPC4-201ENST00000359005 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC4-201ENST00000359005 K7EP34 96 aa7.22□□□□□ -1.25
TRAPPC4-201ENST00000359005 PFN2P35080 140 aa7.22□□□□□ -1.25
TRAPPC4-201ENST00000359005 KIAA0087Q14695 138 aa7.22□□□□□ -1.25
TRAPPC4-201ENST00000359005 LOC107984156A0A0G2JMH3 177 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 ARL17AQ8IVW1 177 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 SND1-IT1Q9HBX3 110 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 HERC2O95714 4834 aa7.21□□□□□ -1.26
TRAPPC4-201ENST00000359005 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
TRAPPC4-201ENST00000359005 TSPAN13O95857 204 aa7.2□□□□□ -1.26
TRAPPC4-201ENST00000359005 NPC2P61916 151 aa7.2□□□□□ -1.26
TRAPPC4-201ENST00000359005 DAND5Q8N907 189 aa7.2□□□□□ -1.26
TRAPPC4-201ENST00000359005 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC4-201ENST00000359005 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
TRAPPC4-201ENST00000359005 NDUFC2O95298 119 aa7.19□□□□□ -1.26
TRAPPC4-201ENST00000359005 Q9HAA7 133 aa7.19□□□□□ -1.26
TRAPPC4-201ENST00000359005 RNF151Q2KHN1 245 aa7.18□□□□□ -1.26
TRAPPC4-201ENST00000359005 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms