RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RPL28P46779 137 aaKnown RBP4.64□□□□□ -1.67
CSDE1-203ENST00000358528 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
CSDE1-203ENST00000358528 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
CSDE1-203ENST00000358528 IMUPQ9GZP8 106 aa4.64□□□□□ -1.67
CSDE1-203ENST00000358528 LINC00959A0A1B0GUT2 108 aa4.64□□□□□ -1.67
CSDE1-203ENST00000358528 IBA57-AS1B1ANH7 110 aa4.64□□□□□ -1.67
CSDE1-203ENST00000358528 C9orf129Q5T035 196 aaKnown RBP4.64□□□□□ -1.67
CSDE1-203ENST00000358528 IGKV2-28A0A075B6P5 120 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 IGKV2D-28P01615 120 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 COX7CP15954 63 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 ENHOQ6UWT2 76 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 TRAV25A0A0B4J276 109 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 TRBV6-4A0A1B0GX49 114 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 A8MTW9 85 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 CMC4P56277 68 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-203ENST00000358528 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 LINC00482Q8N8I6 264 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 BBC3Q96PG8 261 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-203ENST00000358528 GHRHP01286 108 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 DEFB135Q30KP9 77 aa4.63□□□□□ -1.67
CSDE1-203ENST00000358528 HILS1P60008 231 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 RPL18AQ02543 176 aaKnown RBP4.62□□□□□ -1.67
CSDE1-203ENST00000358528 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
CSDE1-203ENST00000358528 J3KT08 172 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 DAD1P61803 113 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 FAM222AQ5U5X8 452 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 FAM110AQ9BQ89 295 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 DSCR8Q96T75 97 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
CSDE1-203ENST00000358528 CSMD2Q7Z408 3487 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 FHL2Q14192 279 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 DEFB121Q5J5C9 76 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 IGHV3OR16-9A0A0B4J2B5 98 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 LINC01006Q8NI28 216 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-203ENST00000358528 XAGE1AQ9HD64 81 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 KLK12Q9UKR0 248 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 A0A087WZ39 114 aa4.61□□□□□ -1.67
CSDE1-203ENST00000358528 FAM19A1Q7Z5A9 133 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 Q8N3U1 123 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 SPAG11BQ08648 103 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 PRO0255Q9UI72 69 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 NIPBLQ6KC79 2804 aaeCLIP4.6□□□□□ -1.679e-7■■□□□ 11.9
CSDE1-203ENST00000358528 TMEM256-PLSCR3K7ERE1 68 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 REG3AQ06141 175 aa4.6□□□□□ -1.67
CSDE1-203ENST00000358528 FASNP49327 2511 aaKnown RBP4.6□□□□□ -1.67
CSDE1-203ENST00000358528 JMJD7-PLA2G4BH0Y9G9 81 aa4.59□□□□□ -1.67
CSDE1-203ENST00000358528 RBM3P98179 157 aaKnown RBP4.59□□□□□ -1.67
CSDE1-203ENST00000358528 SERP2Q8N6R1 65 aa4.59□□□□□ -1.67
CSDE1-203ENST00000358528 UPK3BQ9BT76 320 aa4.59□□□□□ -1.67
CSDE1-203ENST00000358528 F8P00451 2351 aa4.59□□□□□ -1.67
CSDE1-203ENST00000358528 KIR2DL5BQ8NHK3 375 aa4.59□□□□□ -1.67
CSDE1-203ENST00000358528 C6orf223Q8N319 242 aa4.59□□□□□ -1.68
CSDE1-203ENST00000358528 UNQ6190/PRO20217Q6UXQ8 127 aa4.58□□□□□ -1.68
CSDE1-203ENST00000358528 SETXQ7Z333 2677 aaKnown RBP4.58□□□□□ -1.68
CSDE1-203ENST00000358528 Q6JHZ5 121 aa4.58□□□□□ -1.68
CSDE1-203ENST00000358528 Q6ZQY7 126 aa4.58□□□□□ -1.68
CSDE1-203ENST00000358528 FAM19A5Q7Z5A7 132 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-203ENST00000358528 HIGD2BQ4VC39 106 aa4.58□□□□□ -1.68
CSDE1-203ENST00000358528 Q8N814 137 aa4.58□□□□□ -1.68
CSDE1-203ENST00000358528 DEFB105AQ8NG35 78 aa4.58□□□□□ -1.68
CSDE1-203ENST00000358528 CCKP06307 115 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 CR1P17927 2039 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 HECTD1Q9ULT8 2610 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 ZNF561-AS1K7EIQ3 104 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 SNURFQ9Y675 71 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 A0A096LNT2 108 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 ATRQ13535 2644 aa4.57□□□□□ -1.68
CSDE1-203ENST00000358528 IGLV1-51P01701 117 aa4.56□□□□□ -1.68
CSDE1-203ENST00000358528 GIG44P09565 113 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-203ENST00000358528 Q8IZM0 81 aa4.56□□□□□ -1.68
CSDE1-203ENST00000358528 SMR3AQ99954 134 aa4.56□□□□□ -1.68
CSDE1-203ENST00000358528 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
CSDE1-203ENST00000358528 IGHV4-28A0A0C4DH34 117 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 FSHBP01225 129 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 LINC01600Q96MT4 127 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 APCP25054 2843 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 CAMK2N2Q96S95 79 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 USP24Q9UPU5 2620 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 PLAC8L1A1L4L8 177 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 CYSRT1A8MQ03 144 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 LINC01561Q8N1V8 128 aa4.55□□□□□ -1.68
CSDE1-203ENST00000358528 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 ZNF843Q8N446 348 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 C22orf24Q9Y442 160 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 DIRC1Q969H9 104 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 UNC79Q9P2D8 2635 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 TMEM258P61165 79 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 IL17DQ8TAD2 202 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 CYSTM1Q9H1C7 97 aa4.54□□□□□ -1.68
CSDE1-203ENST00000358528 SMIM9A6NGZ8 99 aa4.53□□□□□ -1.68
CSDE1-203ENST00000358528 CRYGAP11844 174 aa4.53□□□□□ -1.68
CSDE1-203ENST00000358528 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
CSDE1-203ENST00000358528 TRBV10-3A0A0K0K1G6 114 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms