RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 GAGE2EQ4V326 116 aa12.67□□□□□ -0.38
PPP1CA-202ENST00000358239 SVBPQ8N300 66 aa12.67□□□□□ -0.38
PPP1CA-202ENST00000358239 GAGE2DQ9UEU5 116 aa12.67□□□□□ -0.38
PPP1CA-202ENST00000358239 SRSF9Q13242 221 aaKnown RBP eCLIP12.66□□□□□ -0.38
PPP1CA-202ENST00000358239 REG3GQ6UW15 175 aa12.66□□□□□ -0.38
PPP1CA-202ENST00000358239 PHF5AQ7RTV0 110 aaKnown RBP12.66□□□□□ -0.38
PPP1CA-202ENST00000358239 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
PPP1CA-202ENST00000358239 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
PPP1CA-202ENST00000358239 LINC01600Q96MT4 127 aa12.65□□□□□ -0.38
PPP1CA-202ENST00000358239 TRAPPC1Q9Y5R8 145 aa12.65□□□□□ -0.38
PPP1CA-202ENST00000358239 HMCN2Q8NDA2 5059 aa12.64□□□□□ -0.39
PPP1CA-202ENST00000358239 FAM168BA1KXE4 195 aa12.64□□□□□ -0.39
PPP1CA-202ENST00000358239 CXCL5P42830 114 aa12.64□□□□□ -0.39
PPP1CA-202ENST00000358239 LINC00469Q8N7U9 141 aa12.64□□□□□ -0.39
PPP1CA-202ENST00000358239 CST9LQ9H4G1 147 aa12.64□□□□□ -0.39
PPP1CA-202ENST00000358239 IGLV5-45A0A087WSX0 123 aa12.63□□□□□ -0.39
PPP1CA-202ENST00000358239 PMVKQ15126 192 aa12.63□□□□□ -0.39
PPP1CA-202ENST00000358239 FAM19A5Q7Z5A7 132 aaPredicted RBP12.63□□□□□ -0.39
PPP1CA-202ENST00000358239 F8VRH5 84 aa12.62□□□□□ -0.39
PPP1CA-202ENST00000358239 PDZD11Q5EBL8 140 aa12.62□□□□□ -0.39
PPP1CA-202ENST00000358239 C1orf137Q5JT78 98 aa12.61□□□□□ -0.39
PPP1CA-202ENST00000358239 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
PPP1CA-202ENST00000358239 SMIM1B2RUZ4 78 aa12.6□□□□□ -0.39
PPP1CA-202ENST00000358239 PLA2G2DQ9UNK4 145 aa12.6□□□□□ -0.39
PPP1CA-202ENST00000358239 TNXBP22105 4242 aa12.6□□□□□ -0.39
PPP1CA-202ENST00000358239 M0QXV9 152 aa12.59□□□□□ -0.39
PPP1CA-202ENST00000358239 LINC00614P0C842 121 aa12.59□□□□□ -0.39
PPP1CA-202ENST00000358239 C9orf129Q5T035 196 aaKnown RBP12.59□□□□□ -0.39
PPP1CA-202ENST00000358239 RAB5BP61020 215 aa12.58□□□□□ -0.4
PPP1CA-202ENST00000358239 COX7B2Q8TF08 81 aa12.58□□□□□ -0.4
PPP1CA-202ENST00000358239 H3BRM9 83 aa12.57□□□□□ -0.4
PPP1CA-202ENST00000358239 HBDP02042 147 aa12.57□□□□□ -0.4
PPP1CA-202ENST00000358239 KRTAP7-1Q8IUC3 87 aa12.57□□□□□ -0.4
PPP1CA-202ENST00000358239 A0A096LNJ9 63 aa12.56□□□□□ -0.4
PPP1CA-202ENST00000358239 ODF1Q14990 250 aa12.56□□□□□ -0.4
PPP1CA-202ENST00000358239 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
PPP1CA-202ENST00000358239 IGLV7-43P04211 117 aa12.55□□□□□ -0.4
PPP1CA-202ENST00000358239 UBE2BP63146 152 aa12.55□□□□□ -0.4
PPP1CA-202ENST00000358239 IGLC3P0DOY3 106 aa12.54□□□□□ -0.4
PPP1CA-202ENST00000358239 SPINK8P0C7L1 97 aa12.53□□□□□ -0.4
PPP1CA-202ENST00000358239 ATP5LO75964 103 aa12.52□□□□□ -0.41
PPP1CA-202ENST00000358239 NDUFA6P56556 154 aa12.52□□□□□ -0.41
PPP1CA-202ENST00000358239 KRTAP11-1Q8IUC1 163 aa12.52□□□□□ -0.41
PPP1CA-202ENST00000358239 DIRC1Q969H9 104 aa12.52□□□□□ -0.41
PPP1CA-202ENST00000358239 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
PPP1CA-202ENST00000358239 YPEL4Q96NS1 127 aa12.51□□□□□ -0.41
PPP1CA-202ENST00000358239 XAGE1AQ9HD64 81 aa12.51□□□□□ -0.41
PPP1CA-202ENST00000358239 LBHQ53QV2 105 aaPredicted RBP12.5□□□□□ -0.41
PPP1CA-202ENST00000358239 PMCHL1Q16048 86 aa12.49□□□□□ -0.41
PPP1CA-202ENST00000358239 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
PPP1CA-202ENST00000358239 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
PPP1CA-202ENST00000358239 C22orf24Q9Y442 160 aa12.48□□□□□ -0.41
PPP1CA-202ENST00000358239 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
PPP1CA-202ENST00000358239 H0Y9J4 135 aa12.47□□□□□ -0.41
PPP1CA-202ENST00000358239 ZNF22P17026 224 aaPredicted RBP12.46□□□□□ -0.41
PPP1CA-202ENST00000358239 NUPR1O60356 82 aa12.45□□□□□ -0.42
PPP1CA-202ENST00000358239 BAGE3Q86Y29 109 aa12.45□□□□□ -0.42
PPP1CA-202ENST00000358239 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
PPP1CA-202ENST00000358239 MRPL55Q7Z7F7 128 aaKnown RBP12.44□□□□□ -0.42
PPP1CA-202ENST00000358239 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
PPP1CA-202ENST00000358239 CBLN2Q8IUK8 224 aa12.41□□□□□ -0.42
PPP1CA-202ENST00000358239 TRAV12-1A0A0B4J245 112 aa12.4□□□□□ -0.42
PPP1CA-202ENST00000358239 COX17Q14061 63 aa12.4□□□□□ -0.42
PPP1CA-202ENST00000358239 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
PPP1CA-202ENST00000358239 CHTOPQ9Y3Y2 248 aaKnown RBP12.4□□□□□ -0.42
PPP1CA-202ENST00000358239 UBR4Q5T4S7 5183 aa12.4□□□□□ -0.42
PPP1CA-202ENST00000358239 IGLV5-37A0A075B6J1 123 aa12.39□□□□□ -0.43
PPP1CA-202ENST00000358239 ZNF861PO60384 105 aa12.38□□□□□ -0.43
PPP1CA-202ENST00000358239 IFI27L1Q96BM0 104 aa12.38□□□□□ -0.43
PPP1CA-202ENST00000358239 ERG28Q9UKR5 140 aa12.38□□□□□ -0.43
PPP1CA-202ENST00000358239 HSBP1O75506 76 aa12.37□□□□□ -0.43
PPP1CA-202ENST00000358239 PFN2P35080 140 aa12.37□□□□□ -0.43
PPP1CA-202ENST00000358239 NKAPP1Q8N9T2 125 aa12.37□□□□□ -0.43
PPP1CA-202ENST00000358239 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
PPP1CA-202ENST00000358239 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
PPP1CA-202ENST00000358239 BCE1O60756 84 aa12.34□□□□□ -0.43
PPP1CA-202ENST00000358239 TRGC2P03986 189 aa12.34□□□□□ -0.43
PPP1CA-202ENST00000358239 KRTAP1-4P0C5Y4 121 aa12.34□□□□□ -0.43
PPP1CA-202ENST00000358239 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
PPP1CA-202ENST00000358239 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.44
PPP1CA-202ENST00000358239 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
PPP1CA-202ENST00000358239 RPL37AP8A6NKH3 93 aa12.32□□□□□ -0.44
PPP1CA-202ENST00000358239 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
PPP1CA-202ENST00000358239 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
PPP1CA-202ENST00000358239 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
PPP1CA-202ENST00000358239 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
PPP1CA-202ENST00000358239 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
PPP1CA-202ENST00000358239 FAM19A2Q8N3H0 131 aa12.31□□□□□ -0.44
PPP1CA-202ENST00000358239 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
PPP1CA-202ENST00000358239 LRP2P98164 4655 aa12.28□□□□□ -0.44
PPP1CA-202ENST00000358239 LEPROTL1O95214 131 aa12.27□□□□□ -0.45
PPP1CA-202ENST00000358239 VPREB1P12018 145 aa12.27□□□□□ -0.45
PPP1CA-202ENST00000358239 SERF1AO75920 110 aa12.26□□□□□ -0.45
PPP1CA-202ENST00000358239 LINC00158P58513 81 aa12.25□□□□□ -0.45
PPP1CA-202ENST00000358239 IGKV2-28A0A075B6P5 120 aa12.24□□□□□ -0.45
PPP1CA-202ENST00000358239 COLCA2A8K830 154 aa12.24□□□□□ -0.45
PPP1CA-202ENST00000358239 IGKV2D-28P01615 120 aa12.24□□□□□ -0.45
PPP1CA-202ENST00000358239 LINC00310P59036 64 aa12.24□□□□□ -0.45
PPP1CA-202ENST00000358239 HSPB8Q9UJY1 196 aa12.24□□□□□ -0.45
PPP1CA-202ENST00000358239 UBE2AP49459 152 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms