RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 GAGE2AQ6NT46 116 aa12.65□□□□□ -0.38
SPNS3-201ENST00000355530 LINC01561Q8N1V8 128 aa12.65□□□□□ -0.38
SPNS3-201ENST00000355530 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
SPNS3-201ENST00000355530 PRO0255Q9UI72 69 aa12.65□□□□□ -0.38
SPNS3-201ENST00000355530 FAM236AA0A1B0GUQ0 79 aa12.64□□□□□ -0.39
SPNS3-201ENST00000355530 FAM236BA0A1B0GV22 79 aa12.64□□□□□ -0.39
SPNS3-201ENST00000355530 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
SPNS3-201ENST00000355530 PDZD2O15018 2839 aa12.64□□□□□ -0.39
SPNS3-201ENST00000355530 NBPF19A0A087WUL8 3843 aa12.64□□□□□ -0.39
SPNS3-201ENST00000355530 X6R8D5 127 aa12.64□□□□□ -0.39
SPNS3-201ENST00000355530 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
SPNS3-201ENST00000355530 LECT2O14960 151 aa12.62□□□□□ -0.39
SPNS3-201ENST00000355530 CXCL5P42830 114 aa12.62□□□□□ -0.39
SPNS3-201ENST00000355530 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
SPNS3-201ENST00000355530 OBSCN-AS1Q96MR7 158 aa12.62□□□□□ -0.39
SPNS3-201ENST00000355530 TENM4Q6N022 2769 aa12.61□□□□□ -0.39
SPNS3-201ENST00000355530 ATP5G1P05496 136 aa12.6□□□□□ -0.39
SPNS3-201ENST00000355530 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
SPNS3-201ENST00000355530 MTORP42345 2549 aa12.6□□□□□ -0.39
SPNS3-201ENST00000355530 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
SPNS3-201ENST00000355530 C14orf132Q9NPU4 83 aa12.58□□□□□ -0.4
SPNS3-201ENST00000355530 ACANP16112 2415 aa12.58□□□□□ -0.4
SPNS3-201ENST00000355530 KRTAP10-3P60369 221 aa12.58□□□□□ -0.4
SPNS3-201ENST00000355530 ANK3Q12955 4377 aaKnown RBP12.57□□□□□ -0.4
SPNS3-201ENST00000355530 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
SPNS3-201ENST00000355530 A0A096LPF7 62 aa12.56□□□□□ -0.4
SPNS3-201ENST00000355530 COX17Q14061 63 aa12.56□□□□□ -0.4
SPNS3-201ENST00000355530 CD164L2Q6UWJ8 174 aa12.56□□□□□ -0.4
SPNS3-201ENST00000355530 KLK5Q9Y337 293 aaPredicted RBP12.56□□□□□ -0.4
SPNS3-201ENST00000355530 ORMDL1Q9P0S3 153 aa12.56□□□□□ -0.4
SPNS3-201ENST00000355530 NDUFC2O95298 119 aa12.55□□□□□ -0.4
SPNS3-201ENST00000355530 LINC00269Q8N2A0 174 aa12.55□□□□□ -0.4
SPNS3-201ENST00000355530 KMT2BQ9UMN6 2715 aaPredicted RBP12.55□□□□□ -0.4
SPNS3-201ENST00000355530 CFAP161Q6P656 301 aa12.55□□□□□ -0.4
SPNS3-201ENST00000355530 KIAA0087Q14695 138 aa12.54□□□□□ -0.4
SPNS3-201ENST00000355530 A0A1B0GX51 115 aa12.53□□□□□ -0.4
SPNS3-201ENST00000355530 LINC00167Q96N53 147 aa12.53□□□□□ -0.4
SPNS3-201ENST00000355530 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
SPNS3-201ENST00000355530 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
SPNS3-201ENST00000355530 IGHV4-28A0A0C4DH34 117 aa12.52□□□□□ -0.41
SPNS3-201ENST00000355530 SLPIP03973 132 aa12.52□□□□□ -0.41
SPNS3-201ENST00000355530 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
SPNS3-201ENST00000355530 NCR3O14931 201 aa12.51□□□□□ -0.41
SPNS3-201ENST00000355530 REG3AQ06141 175 aa12.51□□□□□ -0.41
SPNS3-201ENST00000355530 ANGP03950 147 aaKnown RBP12.5□□□□□ -0.41
SPNS3-201ENST00000355530 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
SPNS3-201ENST00000355530 TMEM126AQ9H061 195 aa12.5□□□□□ -0.41
SPNS3-201ENST00000355530 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
SPNS3-201ENST00000355530 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
SPNS3-201ENST00000355530 Q6JHZ5 121 aa12.49□□□□□ -0.41
SPNS3-201ENST00000355530 HIST1H4AP62805 103 aaKnown RBP12.49□□□□□ -0.41
SPNS3-201ENST00000355530 IGLV10-54A0A075B6I4 117 aa12.48□□□□□ -0.41
SPNS3-201ENST00000355530 APOC4P55056 127 aa12.48□□□□□ -0.41
SPNS3-201ENST00000355530 PRR3P79522 188 aaKnown RBP12.48□□□□□ -0.41
SPNS3-201ENST00000355530 Q8N814 137 aa12.48□□□□□ -0.41
SPNS3-201ENST00000355530 LINC00846Q9NV44 126 aa12.48□□□□□ -0.41
SPNS3-201ENST00000355530 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
SPNS3-201ENST00000355530 UQCRQO14949 82 aa12.47□□□□□ -0.41
SPNS3-201ENST00000355530 DAD1P61803 113 aa12.47□□□□□ -0.41
SPNS3-201ENST00000355530 C3orf22Q8N5N4 141 aa12.47□□□□□ -0.41
SPNS3-201ENST00000355530 Q8N3U1 123 aa12.47□□□□□ -0.41
SPNS3-201ENST00000355530 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.41
SPNS3-201ENST00000355530 DEFB4AO15263 64 aa12.46□□□□□ -0.41
SPNS3-201ENST00000355530 SMR3AQ99954 134 aa12.46□□□□□ -0.42
SPNS3-201ENST00000355530 TMEM256-PLSCR3K7ERE1 68 aa12.44□□□□□ -0.42
SPNS3-201ENST00000355530 ATOX1O00244 68 aa12.44□□□□□ -0.42
SPNS3-201ENST00000355530 CCKP06307 115 aa12.44□□□□□ -0.42
SPNS3-201ENST00000355530 C9orf153Q5TBE3 101 aa12.44□□□□□ -0.42
SPNS3-201ENST00000355530 MUC7Q8TAX7 377 aa12.44□□□□□ -0.42
SPNS3-201ENST00000355530 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
SPNS3-201ENST00000355530 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
SPNS3-201ENST00000355530 LINC00526Q96FQ7 95 aa12.43□□□□□ -0.42
SPNS3-201ENST00000355530 NBEAL2Q6ZNJ1 2754 aa12.43□□□□□ -0.42
SPNS3-201ENST00000355530 HIVEP2P31629 2446 aa12.43□□□□□ -0.42
SPNS3-201ENST00000355530 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 MIFP14174 115 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 Q8NAQ8 132 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 IGKV3D-7A0A0C4DH55 119 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 J3QKU1 62 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 COX7CP15954 63 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 SPAG11BQ08648 103 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
SPNS3-201ENST00000355530 C6orf99Q4VX62 202 aa12.4□□□□□ -0.42
SPNS3-201ENST00000355530 S100A7L2Q5SY68 101 aa12.4□□□□□ -0.42
SPNS3-201ENST00000355530 LELP1Q5T871 98 aa12.4□□□□□ -0.42
SPNS3-201ENST00000355530 RPL18AQ02543 176 aaKnown RBP12.4□□□□□ -0.43
SPNS3-201ENST00000355530 Q8NDZ9 215 aa12.4□□□□□ -0.43
SPNS3-201ENST00000355530 C3orf56Q8N813 242 aa12.39□□□□□ -0.43
SPNS3-201ENST00000355530 VWFP04275 2813 aa12.38□□□□□ -0.43
SPNS3-201ENST00000355530 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
SPNS3-201ENST00000355530 SMIM20Q8N5G0 67 aa12.38□□□□□ -0.43
SPNS3-201ENST00000355530 C2orf48Q96LS8 159 aa12.38□□□□□ -0.43
SPNS3-201ENST00000355530 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
SPNS3-201ENST00000355530 IGHV4-30-4P0DP06 118 aa12.37□□□□□ -0.43
SPNS3-201ENST00000355530 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
SPNS3-201ENST00000355530 UNQ6190/PRO20217Q6UXQ8 127 aa12.37□□□□□ -0.43
SPNS3-201ENST00000355530 LINC00575Q6W349 94 aa12.37□□□□□ -0.43
SPNS3-201ENST00000355530 PRR34Q9NV39 138 aa12.37□□□□□ -0.43
SPNS3-201ENST00000355530 ATP5EP2Q5VTU8 51 aa12.36□□□□□ -0.43
SPNS3-201ENST00000355530 C6orf223Q8N319 242 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms