RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 KPRPQ5T749 579 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP1-202ENST00000346416 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP1-202ENST00000346416 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
CDK5RAP1-202ENST00000346416 CD164L2Q6UWJ8 174 aa9.65□□□□□ -0.86
CDK5RAP1-202ENST00000346416 COPS9Q8WXC6 57 aa9.65□□□□□ -0.86
CDK5RAP1-202ENST00000346416 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
CDK5RAP1-202ENST00000346416 C6orf226Q5I0X4 101 aa9.64□□□□□ -0.87
CDK5RAP1-202ENST00000346416 NANOS2P60321 138 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP1-202ENST00000346416 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP1-202ENST00000346416 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
CDK5RAP1-202ENST00000346416 COX7A2LO14548 114 aa9.62□□□□□ -0.87
CDK5RAP1-202ENST00000346416 Q8IZM0 81 aa9.62□□□□□ -0.87
CDK5RAP1-202ENST00000346416 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
CDK5RAP1-202ENST00000346416 C11orf45Q8TAV5 145 aa9.62□□□□□ -0.87
CDK5RAP1-202ENST00000346416 TRBV30A0A0K0K1B3 111 aa9.62□□□□□ -0.87
CDK5RAP1-202ENST00000346416 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
CDK5RAP1-202ENST00000346416 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
CDK5RAP1-202ENST00000346416 TRIAP1O43715 76 aa9.61□□□□□ -0.87
CDK5RAP1-202ENST00000346416 RPL13AP40429 203 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP1-202ENST00000346416 LINC00158P58513 81 aa9.61□□□□□ -0.87
CDK5RAP1-202ENST00000346416 FOXI1Q12951 378 aa9.61□□□□□ -0.87
CDK5RAP1-202ENST00000346416 PRR34Q9NV39 138 aa9.61□□□□□ -0.87
CDK5RAP1-202ENST00000346416 DEFB131BA0A096LNP1 70 aa9.6□□□□□ -0.87
CDK5RAP1-202ENST00000346416 PFN2P35080 140 aa9.6□□□□□ -0.87
CDK5RAP1-202ENST00000346416 ATXN8Q156A1 80 aa9.6□□□□□ -0.87
CDK5RAP1-202ENST00000346416 TEN1Q86WV5 123 aa9.6□□□□□ -0.87
CDK5RAP1-202ENST00000346416 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
CDK5RAP1-202ENST00000346416 K7EIL1 84 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 M0QXV9 152 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 MALP21145 153 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 C2orf82Q6UX34 121 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 COX6CP09669 75 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 WFDC10BQ8IUB3 73 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 SPATA25Q9BR10 227 aa9.59□□□□□ -0.87
CDK5RAP1-202ENST00000346416 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 KIAA0087Q14695 138 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 DEFB121Q5J5C9 76 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 ENHOQ6UWT2 76 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 CKS1BP61024 79 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
CDK5RAP1-202ENST00000346416 SLC25A20O43772 301 aa9.57□□□□□ -0.88
CDK5RAP1-202ENST00000346416 ESRGQ1W209 222 aa9.57□□□□□ -0.88
CDK5RAP1-202ENST00000346416 C9JAW5 83 aa9.56□□□□□ -0.88
CDK5RAP1-202ENST00000346416 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
CDK5RAP1-202ENST00000346416 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
CDK5RAP1-202ENST00000346416 CCL18P55774 89 aa9.56□□□□□ -0.88
CDK5RAP1-202ENST00000346416 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
CDK5RAP1-202ENST00000346416 CRPP02741 224 aa9.55□□□□□ -0.88
CDK5RAP1-202ENST00000346416 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
CDK5RAP1-202ENST00000346416 CXCL5P42830 114 aa9.55□□□□□ -0.88
CDK5RAP1-202ENST00000346416 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
CDK5RAP1-202ENST00000346416 ANKRD29Q8N6D5 301 aa9.55□□□□□ -0.88
CDK5RAP1-202ENST00000346416 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
CDK5RAP1-202ENST00000346416 MDFIQ99750 246 aa9.54□□□□□ -0.88
CDK5RAP1-202ENST00000346416 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP1-202ENST00000346416 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
CDK5RAP1-202ENST00000346416 TRAV8-4A0A0B4J246 113 aa9.53□□□□□ -0.88
CDK5RAP1-202ENST00000346416 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
CDK5RAP1-202ENST00000346416 TRAV13-2A0A0B4J235 113 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 CLEC2BQ92478 149 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 LINC01600Q96MT4 127 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 HUWE1Q7Z6Z7 4374 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 TRBV10-2A0A0K0K1G8 114 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 SPAG11BQ08648 103 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
CDK5RAP1-202ENST00000346416 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
CDK5RAP1-202ENST00000346416 SCGB1A1P11684 91 aa9.5□□□□□ -0.89
CDK5RAP1-202ENST00000346416 COX17Q14061 63 aa9.5□□□□□ -0.89
CDK5RAP1-202ENST00000346416 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
CDK5RAP1-202ENST00000346416 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP1-202ENST00000346416 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
CDK5RAP1-202ENST00000346416 LST1O00453 97 aa9.49□□□□□ -0.89
CDK5RAP1-202ENST00000346416 LINC01556Q5JQF7 62 aa9.49□□□□□ -0.89
CDK5RAP1-202ENST00000346416 C10orf25Q5T742 122 aa9.49□□□□□ -0.89
CDK5RAP1-202ENST00000346416 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
CDK5RAP1-202ENST00000346416 H3BT86 120 aa9.48□□□□□ -0.89
CDK5RAP1-202ENST00000346416 KRTAP26-1Q6PEX3 210 aa9.47□□□□□ -0.89
CDK5RAP1-202ENST00000346416 C15orf53Q8NAA6 179 aa9.47□□□□□ -0.89
CDK5RAP1-202ENST00000346416 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
CDK5RAP1-202ENST00000346416 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.89
CDK5RAP1-202ENST00000346416 RPL28P46779 137 aaKnown RBP9.46□□□□□ -0.89
CDK5RAP1-202ENST00000346416 CDIP1Q9H305 208 aa9.46□□□□□ -0.89
CDK5RAP1-202ENST00000346416 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP1-202ENST00000346416 SMIM11BQ8TCY0 68 aa9.44□□□□□ -0.9
CDK5RAP1-202ENST00000346416 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
CDK5RAP1-202ENST00000346416 DNAH10OSP0CZ25 163 aa9.43□□□□□ -0.9
CDK5RAP1-202ENST00000346416 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
CDK5RAP1-202ENST00000346416 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
CDK5RAP1-202ENST00000346416 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP1-202ENST00000346416 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
CDK5RAP1-202ENST00000346416 NDUFC2O95298 119 aa9.42□□□□□ -0.9
CDK5RAP1-202ENST00000346416 HIGD2BQ4VC39 106 aa9.42□□□□□ -0.9
CDK5RAP1-202ENST00000346416 IGKV2D-24A0A075B6R9 120 aa9.41□□□□□ -0.9
CDK5RAP1-202ENST00000346416 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP1-202ENST00000346416 TEX49A0A1B0GTD5 131 aa9.41□□□□□ -0.9
CDK5RAP1-202ENST00000346416 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
CDK5RAP1-202ENST00000346416 MUC7Q8TAX7 377 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms