RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 H0Y9P7 68 aa8.61□□□□□ -1.03
COL12A1-202ENST00000345356 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
COL12A1-202ENST00000345356 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
COL12A1-202ENST00000345356 C11orf45Q8TAV5 145 aa8.6□□□□□ -1.03
COL12A1-202ENST00000345356 DSCAMO60469 2012 aa8.6□□□□□ -1.03
COL12A1-202ENST00000345356 C19orf84I3L1E1 186 aa8.59□□□□□ -1.03
COL12A1-202ENST00000345356 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
COL12A1-202ENST00000345356 OTOGLQ3ZCN5 2332 aa8.59□□□□□ -1.03
COL12A1-202ENST00000345356 SMIM29Q86T20 159 aa8.59□□□□□ -1.03
COL12A1-202ENST00000345356 Q9UF83 564 aa8.59□□□□□ -1.03
COL12A1-202ENST00000345356 BDP1A6H8Y1 2624 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 EGFEM1PQ0D2K5 195 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 CEP192Q8TEP8 1941 aa8.58□□□□□ -1.04
COL12A1-202ENST00000345356 C10orf142B7Z368 130 aa8.57□□□□□ -1.04
COL12A1-202ENST00000345356 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
COL12A1-202ENST00000345356 LRP4O75096 1905 aa8.57□□□□□ -1.04
COL12A1-202ENST00000345356 DEFB131BA0A096LNP1 70 aa8.57□□□□□ -1.04
COL12A1-202ENST00000345356 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
COL12A1-202ENST00000345356 DEFB116Q30KQ4 102 aa8.57□□□□□ -1.04
COL12A1-202ENST00000345356 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
COL12A1-202ENST00000345356 TM2D3Q9BRN9 247 aa8.55□□□□□ -1.04
COL12A1-202ENST00000345356 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-202ENST00000345356 A0A087WSZ3 146 aa8.54□□□□□ -1.04
COL12A1-202ENST00000345356 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
COL12A1-202ENST00000345356 KPRPQ5T749 579 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-202ENST00000345356 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
COL12A1-202ENST00000345356 WDR87Q6ZQQ6 2873 aa8.53□□□□□ -1.04
COL12A1-202ENST00000345356 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-202ENST00000345356 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
COL12A1-202ENST00000345356 CACNA1AO00555 2505 aa8.53□□□□□ -1.04
COL12A1-202ENST00000345356 LITAFQ99732 161 aa8.52□□□□□ -1.04
COL12A1-202ENST00000345356 Q6ZQT0 140 aa8.52□□□□□ -1.05
COL12A1-202ENST00000345356 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
COL12A1-202ENST00000345356 ADAMTS20P59510 1910 aa8.52□□□□□ -1.05
COL12A1-202ENST00000345356 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
COL12A1-202ENST00000345356 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
COL12A1-202ENST00000345356 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
COL12A1-202ENST00000345356 TTC28Q96AY4 2481 aa8.51□□□□□ -1.05
COL12A1-202ENST00000345356 SONP18583 2426 aaKnown RBP8.51□□□□□ -1.05
COL12A1-202ENST00000345356 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
COL12A1-202ENST00000345356 HIVEP2P31629 2446 aa8.5□□□□□ -1.05
COL12A1-202ENST00000345356 MYO9AB2RTY4 2548 aa8.5□□□□□ -1.05
COL12A1-202ENST00000345356 IGHV3OR16-9A0A0B4J2B5 98 aa8.5□□□□□ -1.05
COL12A1-202ENST00000345356 BRI3O95415 125 aa8.49□□□□□ -1.05
COL12A1-202ENST00000345356 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
COL12A1-202ENST00000345356 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
COL12A1-202ENST00000345356 LOC110117498A0A087WWA1 95 aa8.48□□□□□ -1.05
COL12A1-202ENST00000345356 AVPP01185 164 aa8.47□□□□□ -1.05
COL12A1-202ENST00000345356 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-202ENST00000345356 ZNF706Q9Y5V0 76 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-202ENST00000345356 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
COL12A1-202ENST00000345356 C11orf72Q8NBR9 251 aa8.46□□□□□ -1.06
COL12A1-202ENST00000345356 Q9BRP9 147 aa8.46□□□□□ -1.06
COL12A1-202ENST00000345356 MYO18BQ8IUG5 2567 aa8.45□□□□□ -1.06
COL12A1-202ENST00000345356 PTPRBP23467 1997 aa8.45□□□□□ -1.06
COL12A1-202ENST00000345356 NOTCH2Q04721 2471 aa8.45□□□□□ -1.06
COL12A1-202ENST00000345356 PIEZO2Q9H5I5 2752 aa8.44□□□□□ -1.06
COL12A1-202ENST00000345356 CDSNQ15517 529 aa8.44□□□□□ -1.06
COL12A1-202ENST00000345356 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
COL12A1-202ENST00000345356 F8WDY8 70 aa8.44□□□□□ -1.06
COL12A1-202ENST00000345356 CUL9Q8IWT3 2517 aa8.43□□□□□ -1.06
COL12A1-202ENST00000345356 HIVEP3Q5T1R4 2406 aa8.42□□□□□ -1.06
COL12A1-202ENST00000345356 A8MUN3 132 aa8.42□□□□□ -1.06
COL12A1-202ENST00000345356 PLA2G2AP14555 144 aa8.42□□□□□ -1.06
COL12A1-202ENST00000345356 Q6ZRU5 148 aa8.41□□□□□ -1.06
COL12A1-202ENST00000345356 FSHBP01225 129 aa8.41□□□□□ -1.06
COL12A1-202ENST00000345356 KLKP1Q107X0 134 aa8.41□□□□□ -1.06
COL12A1-202ENST00000345356 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.06
COL12A1-202ENST00000345356 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
COL12A1-202ENST00000345356 C2orf48Q96LS8 159 aa8.4□□□□□ -1.06
COL12A1-202ENST00000345356 H7BZZ5 65 aa8.39□□□□□ -1.07
COL12A1-202ENST00000345356 CD164Q04900 197 aa8.39□□□□□ -1.07
COL12A1-202ENST00000345356 ERC2-IT1O76042 136 aa8.39□□□□□ -1.07
COL12A1-202ENST00000345356 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
COL12A1-202ENST00000345356 SPINK1P00995 79 aa8.38□□□□□ -1.07
COL12A1-202ENST00000345356 ELOF1P60002 83 aaKnown RBP8.38□□□□□ -1.07
COL12A1-202ENST00000345356 MUC6Q6W4X9 2439 aa8.38□□□□□ -1.07
COL12A1-202ENST00000345356 IGLV1-51P01701 117 aa8.38□□□□□ -1.07
COL12A1-202ENST00000345356 A0A1B0GU69 56 aa8.37□□□□□ -1.07
COL12A1-202ENST00000345356 WIPF1O43516 503 aa8.37□□□□□ -1.07
COL12A1-202ENST00000345356 CCDC168Q8NDH2 2452 aa8.36□□□□□ -1.07
COL12A1-202ENST00000345356 ABCA2Q9BZC7 2435 aa8.36□□□□□ -1.07
COL12A1-202ENST00000345356 A0A1B0GW54 56 aa8.35□□□□□ -1.07
COL12A1-202ENST00000345356 PRLHP81277 87 aa8.35□□□□□ -1.07
COL12A1-202ENST00000345356 VPREB1P12018 145 aa8.35□□□□□ -1.07
COL12A1-202ENST00000345356 C8orf87E5RJ46 101 aa8.34□□□□□ -1.07
COL12A1-202ENST00000345356 H3BPC8 53 aa8.34□□□□□ -1.07
COL12A1-202ENST00000345356 Q6ZTC4 211 aa8.34□□□□□ -1.07
COL12A1-202ENST00000345356 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
COL12A1-202ENST00000345356 C6orf48Q9UBA6 75 aa8.34□□□□□ -1.08
COL12A1-202ENST00000345356 Q8NBF4 154 aa8.33□□□□□ -1.08
COL12A1-202ENST00000345356 A0A1W2PPR1 153 aa8.33□□□□□ -1.08
COL12A1-202ENST00000345356 LYPD5Q6UWN5 251 aa8.33□□□□□ -1.08
COL12A1-202ENST00000345356 ZNF462Q96JM2 2506 aa8.32□□□□□ -1.08
COL12A1-202ENST00000345356 FN1P02751 2386 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms