RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 GAGE10A6NGK3 116 aa17.13■□□□□ 0.33
TRADD-201ENST00000345057 CXCL5P42830 114 aa17.13■□□□□ 0.33
TRADD-201ENST00000345057 PGPEP1Q9NXJ5 209 aa17.13■□□□□ 0.33
TRADD-201ENST00000345057 UBE2WQ96B02 151 aa17.12■□□□□ 0.33
TRADD-201ENST00000345057 NAA38Q9BRA0 125 aaKnown RBP17.12■□□□□ 0.33
TRADD-201ENST00000345057 GAGE12HA6NDE8 117 aa17.11■□□□□ 0.33
TRADD-201ENST00000345057 IBA57-AS1B1ANH7 110 aa17.11■□□□□ 0.33
TRADD-201ENST00000345057 FBN3Q75N90 2809 aa17.1■□□□□ 0.33
TRADD-201ENST00000345057 NHLRC4P0CG21 123 aaPredicted RBP17.1■□□□□ 0.33
TRADD-201ENST00000345057 CFAP161Q6P656 301 aa17.1■□□□□ 0.33
TRADD-201ENST00000345057 LINC00308Q8TCZ7 52 aa17.1■□□□□ 0.33
TRADD-201ENST00000345057 K7EP34 96 aa17.09■□□□□ 0.33
TRADD-201ENST00000345057 CKS1BP61024 79 aa17.09■□□□□ 0.33
TRADD-201ENST00000345057 CCL18P55774 89 aa17.08■□□□□ 0.33
TRADD-201ENST00000345057 SPCS1Q9Y6A9 102 aa17.08■□□□□ 0.33
TRADD-201ENST00000345057 LYRM7Q5U5X0 104 aa17.07■□□□□ 0.32
TRADD-201ENST00000345057 DAND5Q8N907 189 aa17.07■□□□□ 0.32
TRADD-201ENST00000345057 KLK5Q9Y337 293 aaPredicted RBP17.07■□□□□ 0.32
TRADD-201ENST00000345057 A0A0U1RRA0 63 aa17.06■□□□□ 0.32
TRADD-201ENST00000345057 TSPAN13O95857 204 aa17.06■□□□□ 0.32
TRADD-201ENST00000345057 DNAH10OSP0CZ25 163 aa17.06■□□□□ 0.32
TRADD-201ENST00000345057 NPC2P61916 151 aa17.06■□□□□ 0.32
TRADD-201ENST00000345057 KIAA0087Q14695 138 aa17.04■□□□□ 0.32
TRADD-201ENST00000345057 ERG28Q9UKR5 140 aa17.04■□□□□ 0.32
TRADD-201ENST00000345057 LINC00158P58513 81 aa17.03■□□□□ 0.32
TRADD-201ENST00000345057 MIR7-3HGQ8N6C7 128 aa17.01■□□□□ 0.31
TRADD-201ENST00000345057 LINC00588Q9Y4M8 146 aa17.01■□□□□ 0.31
TRADD-201ENST00000345057 SPAG11BQ08648 103 aa17■□□□□ 0.31
TRADD-201ENST00000345057 COX17Q14061 63 aa17■□□□□ 0.31
TRADD-201ENST00000345057 UPK3BQ9BT76 320 aa16.99■□□□□ 0.31
TRADD-201ENST00000345057 C1orf43Q9BWL3 253 aa16.99■□□□□ 0.31
TRADD-201ENST00000345057 EIF4EBP3O60516 100 aaPredicted RBP16.99■□□□□ 0.31
TRADD-201ENST00000345057 MEGF8Q7Z7M0 2845 aa16.98■□□□□ 0.31
TRADD-201ENST00000345057 DNAH9Q9NYC9 4486 aa16.98■□□□□ 0.31
TRADD-201ENST00000345057 C2orf82Q6UX34 121 aa16.97■□□□□ 0.31
TRADD-201ENST00000345057 SOSTDC1Q6X4U4 206 aa16.97■□□□□ 0.31
TRADD-201ENST00000345057 LOC107984156A0A0G2JMH3 177 aa16.97■□□□□ 0.31
TRADD-201ENST00000345057 PFN2P35080 140 aa16.97■□□□□ 0.31
TRADD-201ENST00000345057 Q1RN00 199 aa16.97■□□□□ 0.31
TRADD-201ENST00000345057 ARL17AQ8IVW1 177 aa16.97■□□□□ 0.31
TRADD-201ENST00000345057 MUC7Q8TAX7 377 aa16.95■□□□□ 0.3
TRADD-201ENST00000345057 PSMB2P49721 201 aa16.94■□□□□ 0.3
TRADD-201ENST00000345057 KRTAP26-1Q6PEX3 210 aa16.93■□□□□ 0.3
TRADD-201ENST00000345057 TRBV20-1A0A075B6N2 111 aa16.93■□□□□ 0.3
TRADD-201ENST00000345057 H7C2G1 150 aa16.92■□□□□ 0.3
TRADD-201ENST00000345057 SCGB1C2P0DMR2 95 aa16.91■□□□□ 0.3
TRADD-201ENST00000345057 SND1-IT1Q9HBX3 110 aa16.91■□□□□ 0.3
TRADD-201ENST00000345057 IGKV2D-24A0A075B6R9 120 aa16.9■□□□□ 0.3
TRADD-201ENST00000345057 TRBV30A0A0K0K1B3 111 aa16.9■□□□□ 0.3
TRADD-201ENST00000345057 RPL13AP40429 203 aaKnown RBP16.9■□□□□ 0.3
TRADD-201ENST00000345057 ZNF561-AS1K7EIQ3 104 aa16.89■□□□□ 0.29
TRADD-201ENST00000345057 RMI2Q96E14 147 aa16.89■□□□□ 0.29
TRADD-201ENST00000345057 GVQW2A0A096LPI5 108 aaPredicted RBP16.88■□□□□ 0.29
TRADD-201ENST00000345057 TRAV13-2A0A0B4J235 113 aa16.88■□□□□ 0.29
TRADD-201ENST00000345057 NTN5Q8WTR8 489 aaPredicted RBP16.88■□□□□ 0.29
TRADD-201ENST00000345057 COX6CP09669 75 aa16.88■□□□□ 0.29
TRADD-201ENST00000345057 NUPR2A6NF83 97 aa16.87■□□□□ 0.29
TRADD-201ENST00000345057 F8WDY8 70 aa16.86■□□□□ 0.29
TRADD-201ENST00000345057 C6orf223Q8N319 242 aa16.85■□□□□ 0.29
TRADD-201ENST00000345057 APLNQ9ULZ1 77 aa16.85■□□□□ 0.29
TRADD-201ENST00000345057 STAB2Q8WWQ8 2551 aa16.85■□□□□ 0.29
TRADD-201ENST00000345057 H3BMG7 143 aa16.84■□□□□ 0.29
TRADD-201ENST00000345057 UNQ6190/PRO20217Q6UXQ8 127 aa16.84■□□□□ 0.29
TRADD-201ENST00000345057 C2orf48Q96LS8 159 aa16.84■□□□□ 0.29
TRADD-201ENST00000345057 Q9HAA7 133 aa16.84■□□□□ 0.29
TRADD-201ENST00000345057 PRKDCP78527 4128 aaKnown RBP16.83■□□□□ 0.28
TRADD-201ENST00000345057 F8W1H4 67 aa16.83■□□□□ 0.28
TRADD-201ENST00000345057 COL7A1Q02388 2944 aa16.82■□□□□ 0.28
TRADD-201ENST00000345057 TRIAP1O43715 76 aa16.81■□□□□ 0.28
TRADD-201ENST00000345057 C10orf25Q5T742 122 aa16.81■□□□□ 0.28
TRADD-201ENST00000345057 UBE2DNLQ8IWF7 75 aa16.81■□□□□ 0.28
TRADD-201ENST00000345057 C15orf56Q8N910 161 aa16.81■□□□□ 0.28
TRADD-201ENST00000345057 CAMK2N2Q96S95 79 aa16.81■□□□□ 0.28
TRADD-201ENST00000345057 TCL1BO95988 128 aa16.8■□□□□ 0.28
TRADD-201ENST00000345057 LINC00526Q96FQ7 95 aa16.8■□□□□ 0.28
TRADD-201ENST00000345057 NDUFC2O95298 119 aa16.79■□□□□ 0.28
TRADD-201ENST00000345057 HIGD2BQ4VC39 106 aa16.79■□□□□ 0.28
TRADD-201ENST00000345057 C9orf116Q5BN46 136 aaPredicted RBP16.79■□□□□ 0.28
TRADD-201ENST00000345057 ATXN8Q156A1 80 aa16.78■□□□□ 0.28
TRADD-201ENST00000345057 IGKV2-28A0A075B6P5 120 aa16.77■□□□□ 0.27
TRADD-201ENST00000345057 IGKV2D-28P01615 120 aa16.77■□□□□ 0.27
TRADD-201ENST00000345057 C6orf48Q9UBA6 75 aa16.76■□□□□ 0.27
TRADD-201ENST00000345057 LINC00337Q8N6G1 96 aa16.75■□□□□ 0.27
TRADD-201ENST00000345057 RPL28P46779 137 aaKnown RBP16.71■□□□□ 0.27
TRADD-201ENST00000345057 PRO0461Q9UI25 63 aa16.7■□□□□ 0.26
TRADD-201ENST00000345057 Q6ZRU5 148 aa16.69■□□□□ 0.26
TRADD-201ENST00000345057 DYNC2H1Q8NCM8 4307 aaKnown RBP16.69■□□□□ 0.26
TRADD-201ENST00000345057 SYCNQ0VAF6 134 aa16.68■□□□□ 0.26
TRADD-201ENST00000345057 OR13C6PQ8NH95 151 aa16.68■□□□□ 0.26
TRADD-201ENST00000345057 USP17L23D6RBM5 183 aa16.65■□□□□ 0.26
TRADD-201ENST00000345057 NDUFC2-KCTD14E9PQ53 114 aa16.65■□□□□ 0.26
TRADD-201ENST00000345057 LST1O00453 97 aa16.65■□□□□ 0.26
TRADD-201ENST00000345057 WFDC2Q14508 124 aa16.65■□□□□ 0.26
TRADD-201ENST00000345057 TTC32Q5I0X7 151 aa16.65■□□□□ 0.26
TRADD-201ENST00000345057 TMEM126AQ9H061 195 aa16.65■□□□□ 0.26
TRADD-201ENST00000345057 RNF151Q2KHN1 245 aa16.64■□□□□ 0.25
TRADD-201ENST00000345057 LINC01620Q4KN68 170 aa16.64■□□□□ 0.25
TRADD-201ENST00000345057 SMIM11BQ8TCY0 68 aa16.63■□□□□ 0.25
TRADD-201ENST00000345057 CARD19Q96LW7 228 aa16.62■□□□□ 0.25
TRADD-201ENST00000345057 C9JAW5 83 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms