RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
CEACAM3-201ENST00000344550 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
CEACAM3-201ENST00000344550 GAGE2EQ4V326 116 aa12.34□□□□□ -0.43
CEACAM3-201ENST00000344550 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
CEACAM3-201ENST00000344550 GAGE2DQ9UEU5 116 aa12.34□□□□□ -0.43
CEACAM3-201ENST00000344550 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
CEACAM3-201ENST00000344550 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
CEACAM3-201ENST00000344550 IGLV5-45A0A087WSX0 123 aa12.32□□□□□ -0.44
CEACAM3-201ENST00000344550 F8VRH5 84 aa12.32□□□□□ -0.44
CEACAM3-201ENST00000344550 PDZD11Q5EBL8 140 aa12.32□□□□□ -0.44
CEACAM3-201ENST00000344550 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
CEACAM3-201ENST00000344550 CST9LQ9H4G1 147 aa12.31□□□□□ -0.44
CEACAM3-201ENST00000344550 KRTAP10-8P60410 259 aa12.3□□□□□ -0.44
CEACAM3-201ENST00000344550 PMVKQ15126 192 aa12.3□□□□□ -0.44
CEACAM3-201ENST00000344550 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
CEACAM3-201ENST00000344550 C1orf137Q5JT78 98 aa12.3□□□□□ -0.44
CEACAM3-201ENST00000344550 LINC00469Q8N7U9 141 aa12.3□□□□□ -0.44
CEACAM3-201ENST00000344550 FAM168BA1KXE4 195 aa12.29□□□□□ -0.44
CEACAM3-201ENST00000344550 SNAPINO95295 136 aa12.29□□□□□ -0.44
CEACAM3-201ENST00000344550 SVBPQ8N300 66 aa12.29□□□□□ -0.44
CEACAM3-201ENST00000344550 HMCN2Q8NDA2 5059 aa12.28□□□□□ -0.44
CEACAM3-201ENST00000344550 FAM19A5Q7Z5A7 132 aaPredicted RBP12.28□□□□□ -0.44
CEACAM3-201ENST00000344550 SMIM1B2RUZ4 78 aa12.27□□□□□ -0.45
CEACAM3-201ENST00000344550 M0QXV9 152 aa12.27□□□□□ -0.45
CEACAM3-201ENST00000344550 IGLV7-43P04211 117 aa12.27□□□□□ -0.45
CEACAM3-201ENST00000344550 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.45
CEACAM3-201ENST00000344550 DIRC1Q969H9 104 aa12.27□□□□□ -0.45
CEACAM3-201ENST00000344550 TRAPPC1Q9Y5R8 145 aa12.27□□□□□ -0.45
CEACAM3-201ENST00000344550 KRTAP7-1Q8IUC3 87 aa12.26□□□□□ -0.45
CEACAM3-201ENST00000344550 H3BRM9 83 aa12.25□□□□□ -0.45
CEACAM3-201ENST00000344550 APOC3P02656 99 aa12.25□□□□□ -0.45
CEACAM3-201ENST00000344550 LINC00614P0C842 121 aa12.25□□□□□ -0.45
CEACAM3-201ENST00000344550 RAB5BP61020 215 aa12.25□□□□□ -0.45
CEACAM3-201ENST00000344550 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
CEACAM3-201ENST00000344550 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
CEACAM3-201ENST00000344550 COX7B2Q8TF08 81 aa12.24□□□□□ -0.45
CEACAM3-201ENST00000344550 TNXBP22105 4242 aa12.23□□□□□ -0.45
CEACAM3-201ENST00000344550 UBE2BP63146 152 aa12.23□□□□□ -0.45
CEACAM3-201ENST00000344550 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
CEACAM3-201ENST00000344550 HBDP02042 147 aa12.22□□□□□ -0.45
CEACAM3-201ENST00000344550 IGLC3P0DOY3 106 aa12.21□□□□□ -0.45
CEACAM3-201ENST00000344550 A0A096LNJ9 63 aa12.2□□□□□ -0.46
CEACAM3-201ENST00000344550 ATP5LO75964 103 aa12.2□□□□□ -0.46
CEACAM3-201ENST00000344550 KRTAP11-1Q8IUC1 163 aa12.2□□□□□ -0.46
CEACAM3-201ENST00000344550 H0Y9J4 135 aa12.19□□□□□ -0.46
CEACAM3-201ENST00000344550 NUPR1O60356 82 aa12.19□□□□□ -0.46
CEACAM3-201ENST00000344550 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
CEACAM3-201ENST00000344550 C22orf24Q9Y442 160 aa12.19□□□□□ -0.46
CEACAM3-201ENST00000344550 XAGE1AQ9HD64 81 aa12.18□□□□□ -0.46
CEACAM3-201ENST00000344550 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
CEACAM3-201ENST00000344550 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
CEACAM3-201ENST00000344550 SPINK8P0C7L1 97 aa12.16□□□□□ -0.46
CEACAM3-201ENST00000344550 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
CEACAM3-201ENST00000344550 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
CEACAM3-201ENST00000344550 YPEL4Q96NS1 127 aa12.14□□□□□ -0.47
CEACAM3-201ENST00000344550 IGLV1-50A0A075B6I6 118 aa12.13□□□□□ -0.47
CEACAM3-201ENST00000344550 NDUFA6P56556 154 aa12.13□□□□□ -0.47
CEACAM3-201ENST00000344550 IGLV5-37A0A075B6J1 123 aa12.12□□□□□ -0.47
CEACAM3-201ENST00000344550 ZNF861PO60384 105 aa12.12□□□□□ -0.47
CEACAM3-201ENST00000344550 ZNF22P17026 224 aaPredicted RBP12.12□□□□□ -0.47
CEACAM3-201ENST00000344550 COX17Q14061 63 aa12.12□□□□□ -0.47
CEACAM3-201ENST00000344550 BAGE3Q86Y29 109 aa12.11□□□□□ -0.47
CEACAM3-201ENST00000344550 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.48
CEACAM3-201ENST00000344550 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
CEACAM3-201ENST00000344550 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
CEACAM3-201ENST00000344550 BCE1O60756 84 aa12.07□□□□□ -0.48
CEACAM3-201ENST00000344550 KRTAP1-4P0C5Y4 121 aa12.07□□□□□ -0.48
CEACAM3-201ENST00000344550 RPL28P46779 137 aaKnown RBP12.07□□□□□ -0.48
CEACAM3-201ENST00000344550 C11orf86A6NJI1 115 aa12.06□□□□□ -0.48
CEACAM3-201ENST00000344550 NKAPP1Q8N9T2 125 aa12.06□□□□□ -0.48
CEACAM3-201ENST00000344550 LINC00167Q96N53 147 aa12.06□□□□□ -0.48
CEACAM3-201ENST00000344550 TMEM170BQ5T4T1 132 aa12.05□□□□□ -0.48
CEACAM3-201ENST00000344550 PRR26Q8N8Z3 221 aa12.05□□□□□ -0.48
CEACAM3-201ENST00000344550 ERG28Q9UKR5 140 aa12.05□□□□□ -0.48
CEACAM3-201ENST00000344550 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
CEACAM3-201ENST00000344550 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
CEACAM3-201ENST00000344550 RPL24P83731 157 aaKnown RBP12.03□□□□□ -0.48
CEACAM3-201ENST00000344550 PFN2P35080 140 aa12.02□□□□□ -0.49
CEACAM3-201ENST00000344550 HSBP1O75506 76 aa12.01□□□□□ -0.49
CEACAM3-201ENST00000344550 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
CEACAM3-201ENST00000344550 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
CEACAM3-201ENST00000344550 UBR4Q5T4S7 5183 aa11.99□□□□□ -0.49
CEACAM3-201ENST00000344550 TMEM223A0PJW6 202 aa11.99□□□□□ -0.49
CEACAM3-201ENST00000344550 RPL37AP8A6NKH3 93 aa11.99□□□□□ -0.49
CEACAM3-201ENST00000344550 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
CEACAM3-201ENST00000344550 VPREB1P12018 145 aa11.97□□□□□ -0.49
CEACAM3-201ENST00000344550 GAGE10A6NGK3 116 aa11.96□□□□□ -0.49
CEACAM3-201ENST00000344550 LINC00587B1AMM8 73 aa11.96□□□□□ -0.49
CEACAM3-201ENST00000344550 TRGC2P03986 189 aa11.95□□□□□ -0.5
CEACAM3-201ENST00000344550 KRTAP13-1Q8IUC0 172 aa11.95□□□□□ -0.5
CEACAM3-201ENST00000344550 LRP2P98164 4655 aa11.95□□□□□ -0.5
CEACAM3-201ENST00000344550 HERV-K104P63124 156 aa11.94□□□□□ -0.5
CEACAM3-201ENST00000344550 UBE2AP49459 152 aa11.93□□□□□ -0.5
CEACAM3-201ENST00000344550 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
CEACAM3-201ENST00000344550 LINC00158P58513 81 aa11.92□□□□□ -0.5
CEACAM3-201ENST00000344550 FAM19A2Q8N3H0 131 aa11.92□□□□□ -0.5
CEACAM3-201ENST00000344550 CRYGAP11844 174 aa11.91□□□□□ -0.5
CEACAM3-201ENST00000344550 IGKV2-28A0A075B6P5 120 aa11.9□□□□□ -0.5
CEACAM3-201ENST00000344550 IGKV2D-28P01615 120 aa11.9□□□□□ -0.5
CEACAM3-201ENST00000344550 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms