RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 LINC00269Q8N2A0 174 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 TIMM17BO60830 172 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 CLPSL2Q6UWE3 100 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 Q8N1X5 172 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
HERPUD1-202ENST00000344114 HERV-K104P63124 156 aa9.11□□□□□ -0.95
HERPUD1-202ENST00000344114 TNP2Q05952 138 aa9.11□□□□□ -0.95
HERPUD1-202ENST00000344114 COX11Q9Y6N1 276 aa9.11□□□□□ -0.95
HERPUD1-202ENST00000344114 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 Q6ZVH6 145 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 Q8N3U1 123 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 SPANXCQ9NY87 97 aa9.1□□□□□ -0.95
HERPUD1-202ENST00000344114 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 IGHV3-30P01768 117 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 IGHV3-30-5P0DP03 117 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 XCL1P47992 114 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 ESRGQ1W209 222 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 SFTA2Q6UW10 78 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 CHCHD10Q8WYQ3 142 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 Q9H8V8 135 aa9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 NHP2Q9NX24 153 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-202ENST00000344114 CRPP02741 224 aa9.08□□□□□ -0.96
HERPUD1-202ENST00000344114 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
HERPUD1-202ENST00000344114 WFDC10BQ8IUB3 73 aa9.08□□□□□ -0.96
HERPUD1-202ENST00000344114 LITAFQ99732 161 aa9.08□□□□□ -0.96
HERPUD1-202ENST00000344114 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
HERPUD1-202ENST00000344114 HERC1Q15751 4861 aa9.07□□□□□ -0.96
HERPUD1-202ENST00000344114 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
HERPUD1-202ENST00000344114 A0A1B0GWB2 263 aa9.07□□□□□ -0.96
HERPUD1-202ENST00000344114 K7EP13 123 aa9.07□□□□□ -0.96
HERPUD1-202ENST00000344114 CIRBPQ14011 172 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-202ENST00000344114 TRAV8-4A0A0B4J246 113 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 COX7A2LO14548 114 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 IGHV3-33P01772 117 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 RPL24P83731 157 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 MIAQ16674 131 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 Q8IZM0 81 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
HERPUD1-202ENST00000344114 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
HERPUD1-202ENST00000344114 IFITM1P13164 125 aa9.05□□□□□ -0.96
HERPUD1-202ENST00000344114 IGLV10-54A0A075B6I4 117 aa9.04□□□□□ -0.96
HERPUD1-202ENST00000344114 FOXI1Q12951 378 aa9.04□□□□□ -0.96
HERPUD1-202ENST00000344114 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
HERPUD1-202ENST00000344114 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
HERPUD1-202ENST00000344114 COPS9Q8WXC6 57 aa9.04□□□□□ -0.96
HERPUD1-202ENST00000344114 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
HERPUD1-202ENST00000344114 PRSS2P07478 247 aa9.03□□□□□ -0.96
HERPUD1-202ENST00000344114 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
HERPUD1-202ENST00000344114 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 GAGE12HA6NDE8 117 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 K7ERJ3 54 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 APOMO95445 188 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 DNAH10OSP0CZ25 163 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 MALP21145 153 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 CXCL5P42830 114 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 CCL18P55774 89 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 RAB37Q96AX2 223 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 UBE2WQ96B02 151 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 PPDPFQ9H3Y8 114 aa9.02□□□□□ -0.97
HERPUD1-202ENST00000344114 ADAMTSL4-AS1Q5T5F5 129 aa9.01□□□□□ -0.97
HERPUD1-202ENST00000344114 A0A0B4J2C4 111 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 A4D1N5 150 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 H3BUT2 72 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 C6orf226Q5I0X4 101 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 CFAP161Q6P656 301 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 UPK3BQ9BT76 320 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
HERPUD1-202ENST00000344114 IBA57-AS1B1ANH7 110 aa8.99□□□□□ -0.97
HERPUD1-202ENST00000344114 CFC1BP0CG36 223 aa8.99□□□□□ -0.97
HERPUD1-202ENST00000344114 CFC1P0CG37 223 aa8.99□□□□□ -0.97
HERPUD1-202ENST00000344114 VAMP3Q15836 100 aa8.99□□□□□ -0.97
HERPUD1-202ENST00000344114 A0A1W2PPM0 123 aa8.98□□□□□ -0.97
HERPUD1-202ENST00000344114 CKS1BP61024 79 aa8.98□□□□□ -0.97
HERPUD1-202ENST00000344114 KIAA0087Q14695 138 aa8.98□□□□□ -0.97
HERPUD1-202ENST00000344114 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
HERPUD1-202ENST00000344114 FABP2P12104 132 aa8.97□□□□□ -0.97
HERPUD1-202ENST00000344114 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
HERPUD1-202ENST00000344114 DAND5Q8N907 189 aa8.97□□□□□ -0.97
HERPUD1-202ENST00000344114 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
HERPUD1-202ENST00000344114 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
HERPUD1-202ENST00000344114 KRTAP10-2P60368 255 aa8.96□□□□□ -0.98
HERPUD1-202ENST00000344114 NPC2P61916 151 aa8.96□□□□□ -0.98
HERPUD1-202ENST00000344114 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
HERPUD1-202ENST00000344114 NAA38Q9BRA0 125 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-202ENST00000344114 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.98
HERPUD1-202ENST00000344114 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
HERPUD1-202ENST00000344114 A0A0U1RRA0 63 aa8.95□□□□□ -0.98
HERPUD1-202ENST00000344114 LINC00158P58513 81 aa8.95□□□□□ -0.98
HERPUD1-202ENST00000344114 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
HERPUD1-202ENST00000344114 EPM2AB3EWF7 344 aa8.94□□□□□ -0.98
HERPUD1-202ENST00000344114 TSPAN13O95857 204 aa8.94□□□□□ -0.98
HERPUD1-202ENST00000344114 COX17Q14061 63 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms