RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 APOC4P55056 127 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 FBN1P35555 2871 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-202ENST00000343765 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
VIPAS39-202ENST00000343765 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
VIPAS39-202ENST00000343765 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
VIPAS39-202ENST00000343765 TRAV8-4A0A0B4J246 113 aa10.3□□□□□ -0.76
VIPAS39-202ENST00000343765 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
VIPAS39-202ENST00000343765 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
VIPAS39-202ENST00000343765 CCL18P55774 89 aa10.29□□□□□ -0.76
VIPAS39-202ENST00000343765 FAM218AQ96MZ4 157 aa10.29□□□□□ -0.76
VIPAS39-202ENST00000343765 A0A1B0GUV1 79 aa10.28□□□□□ -0.76
VIPAS39-202ENST00000343765 LINC01600Q96MT4 127 aa10.28□□□□□ -0.76
VIPAS39-202ENST00000343765 ANK2Q01484 3957 aa10.28□□□□□ -0.76
VIPAS39-202ENST00000343765 TRAV13-2A0A0B4J235 113 aa10.28□□□□□ -0.76
VIPAS39-202ENST00000343765 CITED1Q99966 193 aa10.28□□□□□ -0.76
VIPAS39-202ENST00000343765 IBA57-AS1B1ANH7 110 aa10.27□□□□□ -0.76
VIPAS39-202ENST00000343765 ANGP03950 147 aaKnown RBP10.27□□□□□ -0.76
VIPAS39-202ENST00000343765 MAST4O15021 2626 aa10.27□□□□□ -0.77
VIPAS39-202ENST00000343765 NOTCH1P46531 2555 aa10.26□□□□□ -0.77
VIPAS39-202ENST00000343765 Q8NAQ8 132 aa10.26□□□□□ -0.77
VIPAS39-202ENST00000343765 Q9HAA7 133 aa10.25□□□□□ -0.77
VIPAS39-202ENST00000343765 ATP5G1P05496 136 aa10.25□□□□□ -0.77
VIPAS39-202ENST00000343765 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
VIPAS39-202ENST00000343765 OR13C6PQ8NH95 151 aa10.25□□□□□ -0.77
VIPAS39-202ENST00000343765 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
VIPAS39-202ENST00000343765 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
VIPAS39-202ENST00000343765 TENM3Q9P273 2699 aa10.23□□□□□ -0.77
VIPAS39-202ENST00000343765 CKS1BP61024 79 aa10.23□□□□□ -0.77
VIPAS39-202ENST00000343765 RPL28P46779 137 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-202ENST00000343765 REG3AQ06141 175 aa10.23□□□□□ -0.77
VIPAS39-202ENST00000343765 SNCGO76070 127 aa10.22□□□□□ -0.77
VIPAS39-202ENST00000343765 Q8IZM0 81 aa10.22□□□□□ -0.77
VIPAS39-202ENST00000343765 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
VIPAS39-202ENST00000343765 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
VIPAS39-202ENST00000343765 MIFP14174 115 aa10.22□□□□□ -0.77
VIPAS39-202ENST00000343765 MALP21145 153 aa10.22□□□□□ -0.77
VIPAS39-202ENST00000343765 TRACP01848 142 aa10.21□□□□□ -0.77
VIPAS39-202ENST00000343765 SPART-AS1P0CW21 52 aa10.21□□□□□ -0.77
VIPAS39-202ENST00000343765 A0A1B0GV72 72 aa10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 TTC32Q5I0X7 151 aa10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 CD164L2Q6UWJ8 174 aa10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 A0A087WYN8 130 aa10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 PRR3P79522 188 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 C9orf116Q5BN46 136 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-202ENST00000343765 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
VIPAS39-202ENST00000343765 MRPL23Q16540 153 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-202ENST00000343765 RETNQ9HD89 108 aa10.18□□□□□ -0.78
VIPAS39-202ENST00000343765 LINC00526Q96FQ7 95 aa10.18□□□□□ -0.78
VIPAS39-202ENST00000343765 KIAA0087Q14695 138 aa10.17□□□□□ -0.78
VIPAS39-202ENST00000343765 DEFB121Q5J5C9 76 aa10.17□□□□□ -0.78
VIPAS39-202ENST00000343765 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
VIPAS39-202ENST00000343765 COL6A5A8TX70 2615 aa10.17□□□□□ -0.78
VIPAS39-202ENST00000343765 DNAL4O96015 105 aa10.17□□□□□ -0.78
VIPAS39-202ENST00000343765 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
VIPAS39-202ENST00000343765 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
VIPAS39-202ENST00000343765 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
VIPAS39-202ENST00000343765 KLK12Q9UKR0 248 aa10.16□□□□□ -0.78
VIPAS39-202ENST00000343765 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
VIPAS39-202ENST00000343765 LECT2O14960 151 aa10.15□□□□□ -0.78
VIPAS39-202ENST00000343765 C6orf223Q8N319 242 aa10.15□□□□□ -0.78
VIPAS39-202ENST00000343765 LELP1Q5T871 98 aa10.14□□□□□ -0.79
VIPAS39-202ENST00000343765 LINC01561Q8N1V8 128 aa10.14□□□□□ -0.79
VIPAS39-202ENST00000343765 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
VIPAS39-202ENST00000343765 SLPIP03973 132 aa10.13□□□□□ -0.79
VIPAS39-202ENST00000343765 C10orf25Q5T742 122 aa10.12□□□□□ -0.79
VIPAS39-202ENST00000343765 H0YGX0 51 aa10.12□□□□□ -0.79
VIPAS39-202ENST00000343765 SPAG11BQ08648 103 aa10.12□□□□□ -0.79
VIPAS39-202ENST00000343765 UNQ6190/PRO20217Q6UXQ8 127 aa10.12□□□□□ -0.79
VIPAS39-202ENST00000343765 ANAPC13Q9BS18 74 aa10.12□□□□□ -0.79
VIPAS39-202ENST00000343765 NCR3O14931 201 aa10.11□□□□□ -0.79
VIPAS39-202ENST00000343765 CXCL5P42830 114 aa10.11□□□□□ -0.79
VIPAS39-202ENST00000343765 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
VIPAS39-202ENST00000343765 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
VIPAS39-202ENST00000343765 NBEAL1Q6ZS30 2694 aa10.11□□□□□ -0.79
VIPAS39-202ENST00000343765 WIPF1O43516 503 aa10.1□□□□□ -0.79
VIPAS39-202ENST00000343765 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
VIPAS39-202ENST00000343765 Q8NDZ9 215 aa10.1□□□□□ -0.79
VIPAS39-202ENST00000343765 CMYA5Q8N3K9 4069 aa10.09□□□□□ -0.79
VIPAS39-202ENST00000343765 LYPD5Q6UWN5 251 aa10.09□□□□□ -0.79
VIPAS39-202ENST00000343765 ENHOQ6UWT2 76 aa10.09□□□□□ -0.79
VIPAS39-202ENST00000343765 COX17Q14061 63 aa10.09□□□□□ -0.79
VIPAS39-202ENST00000343765 NANOS2P60321 138 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-202ENST00000343765 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
VIPAS39-202ENST00000343765 CYSRT1A8MQ03 144 aa10.08□□□□□ -0.8
VIPAS39-202ENST00000343765 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
VIPAS39-202ENST00000343765 Q6ZTC4 211 aa10.07□□□□□ -0.8
VIPAS39-202ENST00000343765 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
VIPAS39-202ENST00000343765 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
VIPAS39-202ENST00000343765 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
VIPAS39-202ENST00000343765 INAFM2P0DMQ5 153 aa10.06□□□□□ -0.8
VIPAS39-202ENST00000343765 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
VIPAS39-202ENST00000343765 KLK5Q9Y337 293 aaPredicted RBP10.06□□□□□ -0.8
VIPAS39-202ENST00000343765 ACYP1P07311 99 aa10.05□□□□□ -0.8
VIPAS39-202ENST00000343765 NDUFC2O95298 119 aa10.04□□□□□ -0.8
VIPAS39-202ENST00000343765 KRTAP24-1Q3LI83 254 aa10.04□□□□□ -0.8
VIPAS39-202ENST00000343765 S100A7L2Q5SY68 101 aa10.04□□□□□ -0.8
VIPAS39-202ENST00000343765 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms