RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 C2orf91Q6ZV80 131 aa10.68□□□□□ -0.7
UBE3B-202ENST00000342494 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
UBE3B-202ENST00000342494 YPEL4Q96NS1 127 aa10.68□□□□□ -0.7
UBE3B-202ENST00000342494 F8WDY8 70 aa10.68□□□□□ -0.7
UBE3B-202ENST00000342494 FAM30AQ9NZY2 134 aa10.68□□□□□ -0.7
UBE3B-202ENST00000342494 BEAN1Q3B7T3 259 aa10.67□□□□□ -0.7
UBE3B-202ENST00000342494 CSDC2Q9Y534 153 aaKnown RBP10.67□□□□□ -0.7
UBE3B-202ENST00000342494 NDUFC1O43677 76 aa10.67□□□□□ -0.7
UBE3B-202ENST00000342494 IGHV6-1A0A0B4J1U7 121 aa10.66□□□□□ -0.7
UBE3B-202ENST00000342494 Q6JHZ5 121 aa10.66□□□□□ -0.7
UBE3B-202ENST00000342494 C2orf48Q96LS8 159 aa10.66□□□□□ -0.7
UBE3B-202ENST00000342494 V9GYY9 64 aa10.66□□□□□ -0.7
UBE3B-202ENST00000342494 Q9BRP9 147 aa10.66□□□□□ -0.7
UBE3B-202ENST00000342494 Q8N814 137 aa10.66□□□□□ -0.7
UBE3B-202ENST00000342494 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
UBE3B-202ENST00000342494 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
UBE3B-202ENST00000342494 RAI1Q7Z5J4 1906 aaPredicted RBP10.65□□□□□ -0.7
UBE3B-202ENST00000342494 CELA1Q9UNI1 258 aa10.64□□□□□ -0.71
UBE3B-202ENST00000342494 FAM240AA0A1B0GVK7 77 aa10.64□□□□□ -0.71
UBE3B-202ENST00000342494 Q6ZSN1 163 aa10.64□□□□□ -0.71
UBE3B-202ENST00000342494 ATP5EP56381 51 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-202ENST00000342494 CEP295Q9C0D2 2601 aa10.63□□□□□ -0.71
UBE3B-202ENST00000342494 IMUPQ9GZP8 106 aa10.63□□□□□ -0.71
UBE3B-202ENST00000342494 EXPH5Q8NEV8 1989 aa10.62□□□□□ -0.71
UBE3B-202ENST00000342494 COL5A1P20908 1838 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-202ENST00000342494 PRYO14603 147 aa10.61□□□□□ -0.71
UBE3B-202ENST00000342494 AMELXQ99217 191 aa10.61□□□□□ -0.71
UBE3B-202ENST00000342494 MDFIQ99750 246 aa10.61□□□□□ -0.71
UBE3B-202ENST00000342494 ANKRD11Q6UB99 2663 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-202ENST00000342494 SETD2Q9BYW2 2564 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-202ENST00000342494 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
UBE3B-202ENST00000342494 Q6ZRU5 148 aa10.6□□□□□ -0.71
UBE3B-202ENST00000342494 A6NED7 52 aa10.59□□□□□ -0.71
UBE3B-202ENST00000342494 X6R8D5 127 aa10.59□□□□□ -0.71
UBE3B-202ENST00000342494 A0A087WSZ3 146 aa10.58□□□□□ -0.72
UBE3B-202ENST00000342494 COX8CQ7Z4L0 72 aa10.58□□□□□ -0.72
UBE3B-202ENST00000342494 LINC00208Q96KT6 92 aa10.58□□□□□ -0.72
UBE3B-202ENST00000342494 Q8N2B8 174 aa10.58□□□□□ -0.72
UBE3B-202ENST00000342494 A0A087WYN8 130 aa10.58□□□□□ -0.72
UBE3B-202ENST00000342494 TSPEAR-AS2P59090 65 aa10.58□□□□□ -0.72
UBE3B-202ENST00000342494 LIMD2Q9BT23 127 aa10.57□□□□□ -0.72
UBE3B-202ENST00000342494 USP9YO00507 2555 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-202ENST00000342494 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-202ENST00000342494 PRLHP81277 87 aa10.56□□□□□ -0.72
UBE3B-202ENST00000342494 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
UBE3B-202ENST00000342494 ATG2AQ2TAZ0 1938 aa10.56□□□□□ -0.72
UBE3B-202ENST00000342494 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
UBE3B-202ENST00000342494 LINC01561Q8N1V8 128 aa10.55□□□□□ -0.72
UBE3B-202ENST00000342494 PTPRSQ13332 1948 aa10.54□□□□□ -0.72
UBE3B-202ENST00000342494 LINC00337Q8N6G1 96 aa10.53□□□□□ -0.72
UBE3B-202ENST00000342494 C22orf24Q9Y442 160 aa10.53□□□□□ -0.72
UBE3B-202ENST00000342494 FASNP49327 2511 aaKnown RBP10.53□□□□□ -0.72
UBE3B-202ENST00000342494 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
UBE3B-202ENST00000342494 COX7CP15954 63 aa10.53□□□□□ -0.72
UBE3B-202ENST00000342494 WDR87Q6ZQQ6 2873 aa10.52□□□□□ -0.72
UBE3B-202ENST00000342494 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.72
UBE3B-202ENST00000342494 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
UBE3B-202ENST00000342494 ADAMTS20P59510 1910 aa10.51□□□□□ -0.73
UBE3B-202ENST00000342494 DEFB116Q30KQ4 102 aa10.51□□□□□ -0.73
UBE3B-202ENST00000342494 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
UBE3B-202ENST00000342494 PKD1L2Q7Z442 2459 aa10.5□□□□□ -0.73
UBE3B-202ENST00000342494 A0A0U1RQV1 116 aa10.5□□□□□ -0.73
UBE3B-202ENST00000342494 SPINK1P00995 79 aa10.5□□□□□ -0.73
UBE3B-202ENST00000342494 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
UBE3B-202ENST00000342494 LINC00310P59036 64 aa10.49□□□□□ -0.73
UBE3B-202ENST00000342494 AGRNO00468 2067 aa10.49□□□□□ -0.73
UBE3B-202ENST00000342494 A8MTW9 85 aa10.49□□□□□ -0.73
UBE3B-202ENST00000342494 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
UBE3B-202ENST00000342494 Q6Q795 121 aa10.48□□□□□ -0.73
UBE3B-202ENST00000342494 XGP55808 180 aa10.48□□□□□ -0.73
UBE3B-202ENST00000342494 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
UBE3B-202ENST00000342494 TRAV7A0A075B6U4 112 aa10.48□□□□□ -0.73
UBE3B-202ENST00000342494 SPTBN4Q9H254 2564 aa10.47□□□□□ -0.73
UBE3B-202ENST00000342494 A0A087WVE0 104 aa10.45□□□□□ -0.74
UBE3B-202ENST00000342494 MUC4Q99102 2169 aa10.45□□□□□ -0.74
UBE3B-202ENST00000342494 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
UBE3B-202ENST00000342494 Q8N3U1 123 aa10.45□□□□□ -0.74
UBE3B-202ENST00000342494 EML5Q05BV3 1969 aa10.45□□□□□ -0.74
UBE3B-202ENST00000342494 MTORP42345 2549 aa10.44□□□□□ -0.74
UBE3B-202ENST00000342494 TET2Q6N021 2002 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-202ENST00000342494 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
UBE3B-202ENST00000342494 A0A096LNJ9 63 aa10.43□□□□□ -0.74
UBE3B-202ENST00000342494 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
UBE3B-202ENST00000342494 H0Y9P7 68 aa10.42□□□□□ -0.74
UBE3B-202ENST00000342494 HCG22E2RYF7 251 aa10.42□□□□□ -0.74
UBE3B-202ENST00000342494 CCDC179H3BU77 68 aa10.41□□□□□ -0.74
UBE3B-202ENST00000342494 CPAMD8Q8IZJ3 1885 aa10.41□□□□□ -0.74
UBE3B-202ENST00000342494 H3BNG1 76 aa10.4□□□□□ -0.74
UBE3B-202ENST00000342494 LINC00315P59091 139 aa10.4□□□□□ -0.74
UBE3B-202ENST00000342494 LINC00167Q96N53 147 aa10.4□□□□□ -0.74
UBE3B-202ENST00000342494 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
UBE3B-202ENST00000342494 IGKV2D-30A0A075B6S6 120 aa10.39□□□□□ -0.75
UBE3B-202ENST00000342494 C16orf90A8MZG2 172 aa10.39□□□□□ -0.75
UBE3B-202ENST00000342494 IGKV2-30P06310 120 aa10.39□□□□□ -0.75
UBE3B-202ENST00000342494 MOBPQ13875 183 aa10.39□□□□□ -0.75
UBE3B-202ENST00000342494 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
UBE3B-202ENST00000342494 POLQO75417 2590 aa10.38□□□□□ -0.75
UBE3B-202ENST00000342494 TRBV7-7A0A0K0K1E9 115 aa10.37□□□□□ -0.75
UBE3B-202ENST00000342494 RTL8CO15255 209 aa10.37□□□□□ -0.75
UBE3B-202ENST00000342494 KIAA0087Q14695 138 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms