RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TRIAP1O43715 76 aa7.03□□□□□ -1.28
RBFOX1-202ENST00000340209 LITAFQ99732 161 aa7.03□□□□□ -1.28
RBFOX1-202ENST00000340209 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
RBFOX1-202ENST00000340209 GAGE12HA6NDE8 117 aa7.02□□□□□ -1.28
RBFOX1-202ENST00000340209 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.28
RBFOX1-202ENST00000340209 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.28
RBFOX1-202ENST00000340209 CSDC2Q9Y534 153 aaKnown RBP7.02□□□□□ -1.29
RBFOX1-202ENST00000340209 COX6CP09669 75 aa7.02□□□□□ -1.29
RBFOX1-202ENST00000340209 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
RBFOX1-202ENST00000340209 C11orf45Q8TAV5 145 aa7.02□□□□□ -1.29
RBFOX1-202ENST00000340209 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
RBFOX1-202ENST00000340209 DEFB131BA0A096LNP1 70 aa7.01□□□□□ -1.29
RBFOX1-202ENST00000340209 COX7A2LO14548 114 aa7.01□□□□□ -1.29
RBFOX1-202ENST00000340209 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
RBFOX1-202ENST00000340209 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
RBFOX1-202ENST00000340209 IGHV3OR16-9A0A0B4J2B5 98 aa7.01□□□□□ -1.29
RBFOX1-202ENST00000340209 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
RBFOX1-202ENST00000340209 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
RBFOX1-202ENST00000340209 ANK2Q01484 3957 aa6.99□□□□□ -1.29
RBFOX1-202ENST00000340209 IGKV2D-24A0A075B6R9 120 aa6.99□□□□□ -1.29
RBFOX1-202ENST00000340209 SLC25A20O43772 301 aa6.99□□□□□ -1.29
RBFOX1-202ENST00000340209 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
RBFOX1-202ENST00000340209 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 F8W1H4 67 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 SPANXDQ9BXN6 97 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 H7C423 109 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 SPAG11BQ08648 103 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 A0A087WZ39 114 aa6.98□□□□□ -1.29
RBFOX1-202ENST00000340209 LYPD5Q6UWN5 251 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 ANKRD29Q8N6D5 301 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 NTN5Q8WTR8 489 aaPredicted RBP6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 NCR3O14931 201 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 LECT2O14960 151 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 J3QR89 54 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 XAGE1AQ9HD64 81 aa6.97□□□□□ -1.29
RBFOX1-202ENST00000340209 LELP1Q5T871 98 aa6.96□□□□□ -1.29
RBFOX1-202ENST00000340209 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.29
RBFOX1-202ENST00000340209 CCL18P55774 89 aa6.96□□□□□ -1.29
RBFOX1-202ENST00000340209 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.29
RBFOX1-202ENST00000340209 IFITM1P13164 125 aa6.96□□□□□ -1.3
RBFOX1-202ENST00000340209 LINC01620Q4KN68 170 aa6.96□□□□□ -1.3
RBFOX1-202ENST00000340209 CARD19Q96LW7 228 aa6.96□□□□□ -1.3
RBFOX1-202ENST00000340209 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
RBFOX1-202ENST00000340209 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
RBFOX1-202ENST00000340209 CD164L2Q6UWJ8 174 aa6.95□□□□□ -1.3
RBFOX1-202ENST00000340209 MDFIQ99750 246 aa6.95□□□□□ -1.3
RBFOX1-202ENST00000340209 ESRGQ1W209 222 aa6.95□□□□□ -1.3
RBFOX1-202ENST00000340209 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
RBFOX1-202ENST00000340209 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
RBFOX1-202ENST00000340209 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
RBFOX1-202ENST00000340209 TEX49A0A1B0GTD5 131 aa6.94□□□□□ -1.3
RBFOX1-202ENST00000340209 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
RBFOX1-202ENST00000340209 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
RBFOX1-202ENST00000340209 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
RBFOX1-202ENST00000340209 K7EIL1 84 aa6.93□□□□□ -1.3
RBFOX1-202ENST00000340209 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
RBFOX1-202ENST00000340209 SLPIP03973 132 aa6.92□□□□□ -1.3
RBFOX1-202ENST00000340209 SIGMAR1Q99720 223 aa6.92□□□□□ -1.3
RBFOX1-202ENST00000340209 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
RBFOX1-202ENST00000340209 C1orf43Q9BWL3 253 aa6.92□□□□□ -1.3
RBFOX1-202ENST00000340209 TIMM17BO60830 172 aa6.92□□□□□ -1.3
RBFOX1-202ENST00000340209 DNAL4O96015 105 aa6.92□□□□□ -1.3
RBFOX1-202ENST00000340209 ENHOQ6UWT2 76 aa6.91□□□□□ -1.3
RBFOX1-202ENST00000340209 CAMK2N2Q96S95 79 aa6.91□□□□□ -1.3
RBFOX1-202ENST00000340209 FOXI1Q12951 378 aa6.91□□□□□ -1.3
RBFOX1-202ENST00000340209 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
RBFOX1-202ENST00000340209 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
RBFOX1-202ENST00000340209 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
RBFOX1-202ENST00000340209 TEN1Q86WV5 123 aa6.9□□□□□ -1.3
RBFOX1-202ENST00000340209 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.31
RBFOX1-202ENST00000340209 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.31
RBFOX1-202ENST00000340209 Q8IZM0 81 aa6.9□□□□□ -1.31
RBFOX1-202ENST00000340209 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.31
RBFOX1-202ENST00000340209 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
RBFOX1-202ENST00000340209 IGKV2-28A0A075B6P5 120 aa6.89□□□□□ -1.31
RBFOX1-202ENST00000340209 IGKV2D-28P01615 120 aa6.89□□□□□ -1.31
RBFOX1-202ENST00000340209 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
RBFOX1-202ENST00000340209 UBE2DNLQ8IWF7 75 aa6.88□□□□□ -1.31
RBFOX1-202ENST00000340209 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
RBFOX1-202ENST00000340209 WIPF1O43516 503 aa6.88□□□□□ -1.31
RBFOX1-202ENST00000340209 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
RBFOX1-202ENST00000340209 A0A087WYN8 130 aa6.87□□□□□ -1.31
RBFOX1-202ENST00000340209 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
RBFOX1-202ENST00000340209 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
RBFOX1-202ENST00000340209 LST1O00453 97 aa6.86□□□□□ -1.31
RBFOX1-202ENST00000340209 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
RBFOX1-202ENST00000340209 KIAA0087Q14695 138 aa6.86□□□□□ -1.31
RBFOX1-202ENST00000340209 TRAV10A0A0B4J240 114 aa6.85□□□□□ -1.31
RBFOX1-202ENST00000340209 CSMD3Q7Z407 3707 aa6.84□□□□□ -1.31
RBFOX1-202ENST00000340209 B5MCH6 92 aa6.84□□□□□ -1.31
RBFOX1-202ENST00000340209 TGP01266 2768 aa6.84□□□□□ -1.31
RBFOX1-202ENST00000340209 C6orf99Q4VX62 202 aa6.84□□□□□ -1.32
RBFOX1-202ENST00000340209 Q6ZRU5 148 aa6.84□□□□□ -1.32
RBFOX1-202ENST00000340209 CASC10Q5T4H9 136 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 C15orf53Q8NAA6 179 aa6.83□□□□□ -1.32
RBFOX1-202ENST00000340209 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms