RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
RET-201ENST00000340058 WDFY3Q8IZQ1 3526 aa10.47□□□□□ -0.73
RET-201ENST00000340058 FAM236AA0A1B0GUQ0 79 aa10.46□□□□□ -0.73
RET-201ENST00000340058 FAM236BA0A1B0GV22 79 aa10.46□□□□□ -0.73
RET-201ENST00000340058 C11orf72Q8NBR9 251 aa10.46□□□□□ -0.74
RET-201ENST00000340058 IGKV2-28A0A075B6P5 120 aa10.46□□□□□ -0.74
RET-201ENST00000340058 IGKV2D-28P01615 120 aa10.46□□□□□ -0.74
RET-201ENST00000340058 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.74
RET-201ENST00000340058 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.74
RET-201ENST00000340058 HIGD2AQ9BW72 106 aa10.45□□□□□ -0.74
RET-201ENST00000340058 KIR2DL5BQ8NHK3 375 aa10.45□□□□□ -0.74
RET-201ENST00000340058 M0R2N4 97 aa10.45□□□□□ -0.74
RET-201ENST00000340058 BEAN1Q3B7T3 259 aa10.44□□□□□ -0.74
RET-201ENST00000340058 H7C423 109 aa10.43□□□□□ -0.74
RET-201ENST00000340058 SPATA25Q9BR10 227 aa10.43□□□□□ -0.74
RET-201ENST00000340058 DCHS1Q96JQ0 3298 aa10.43□□□□□ -0.74
RET-201ENST00000340058 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
RET-201ENST00000340058 C16orf95Q9H693 158 aa10.43□□□□□ -0.74
RET-201ENST00000340058 CYSRT1A8MQ03 144 aa10.42□□□□□ -0.74
RET-201ENST00000340058 LELP1Q5T871 98 aa10.42□□□□□ -0.74
RET-201ENST00000340058 Q8N2B8 174 aa10.42□□□□□ -0.74
RET-201ENST00000340058 AMELXQ99217 191 aa10.42□□□□□ -0.74
RET-201ENST00000340058 NTM-AS1Q6ZSK4 140 aa10.42□□□□□ -0.74
RET-201ENST00000340058 SMIM11BQ8TCY0 68 aa10.42□□□□□ -0.74
RET-201ENST00000340058 ITPR2Q14571 2701 aa10.42□□□□□ -0.74
RET-201ENST00000340058 TRBV30A0A0K0K1B3 111 aa10.42□□□□□ -0.74
RET-201ENST00000340058 FAM19A5Q7Z5A7 132 aaPredicted RBP10.42□□□□□ -0.74
RET-201ENST00000340058 ZANQ9Y493 2812 aa10.41□□□□□ -0.74
RET-201ENST00000340058 RBM3P98179 157 aaKnown RBP10.41□□□□□ -0.74
RET-201ENST00000340058 CDK2AP2O75956 126 aa10.41□□□□□ -0.74
RET-201ENST00000340058 COX7BP24311 80 aa10.41□□□□□ -0.74
RET-201ENST00000340058 SYCNQ0VAF6 134 aa10.41□□□□□ -0.74
RET-201ENST00000340058 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
RET-201ENST00000340058 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
RET-201ENST00000340058 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
RET-201ENST00000340058 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
RET-201ENST00000340058 UTP20O75691 2785 aaKnown RBP10.38□□□□□ -0.75
RET-201ENST00000340058 BAHCC1Q9P281 2608 aa10.38□□□□□ -0.75
RET-201ENST00000340058 A0A1B0GX51 115 aa10.38□□□□□ -0.75
RET-201ENST00000340058 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
RET-201ENST00000340058 Q6ZQY7 126 aa10.38□□□□□ -0.75
RET-201ENST00000340058 RPL37AP8A6NKH3 93 aa10.38□□□□□ -0.75
RET-201ENST00000340058 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
RET-201ENST00000340058 ASPMQ8IZT6 3477 aa10.37□□□□□ -0.75
RET-201ENST00000340058 WFDC10BQ8IUB3 73 aa10.37□□□□□ -0.75
RET-201ENST00000340058 Q8N3U1 123 aa10.37□□□□□ -0.75
RET-201ENST00000340058 NSD1Q96L73 2696 aaPredicted RBP10.37□□□□□ -0.75
RET-201ENST00000340058 FSHBP01225 129 aa10.37□□□□□ -0.75
RET-201ENST00000340058 UBE2AP49459 152 aa10.36□□□□□ -0.75
RET-201ENST00000340058 LST1O00453 97 aa10.36□□□□□ -0.75
RET-201ENST00000340058 FUSP35637 526 aaKnown RBP eCLIP10.36□□□□□ -0.75
RET-201ENST00000340058 TRAV10A0A0B4J240 114 aa10.36□□□□□ -0.75
RET-201ENST00000340058 TMEM256-PLSCR3K7ERE1 68 aa10.36□□□□□ -0.75
RET-201ENST00000340058 FHL3Q13643 280 aa10.36□□□□□ -0.75
RET-201ENST00000340058 NREPQ16612 68 aa10.36□□□□□ -0.75
RET-201ENST00000340058 A8MTW9 85 aa10.35□□□□□ -0.75
RET-201ENST00000340058 ACYP1P07311 99 aa10.35□□□□□ -0.75
RET-201ENST00000340058 TIMM17BO60830 172 aa10.35□□□□□ -0.75
RET-201ENST00000340058 A0A087WZ39 114 aa10.35□□□□□ -0.75
RET-201ENST00000340058 A0A096LNT2 108 aa10.35□□□□□ -0.75
RET-201ENST00000340058 JMJD7-PLA2G4BH0Y9G9 81 aa10.35□□□□□ -0.75
RET-201ENST00000340058 KLK5Q9Y337 293 aaPredicted RBP10.34□□□□□ -0.75
RET-201ENST00000340058 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
RET-201ENST00000340058 XGP55808 180 aa10.32□□□□□ -0.76
RET-201ENST00000340058 RNF183Q96D59 192 aa10.32□□□□□ -0.76
RET-201ENST00000340058 Q8IZM0 81 aa10.31□□□□□ -0.76
RET-201ENST00000340058 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
RET-201ENST00000340058 FAM19A1Q7Z5A9 133 aa10.3□□□□□ -0.76
RET-201ENST00000340058 C3orf84H3BNL1 204 aa10.29□□□□□ -0.76
RET-201ENST00000340058 LINC00643Q86TS7 51 aa10.29□□□□□ -0.76
RET-201ENST00000340058 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
RET-201ENST00000340058 LRCOL1A6NCL2 159 aa10.28□□□□□ -0.76
RET-201ENST00000340058 NDUFS5O43920 106 aa10.27□□□□□ -0.77
RET-201ENST00000340058 KRTAP24-1Q3LI83 254 aa10.27□□□□□ -0.77
RET-201ENST00000340058 A0A087WYN8 130 aa10.27□□□□□ -0.77
RET-201ENST00000340058 LYPD5Q6UWN5 251 aa10.27□□□□□ -0.77
RET-201ENST00000340058 RELNP78509 3460 aa10.27□□□□□ -0.77
RET-201ENST00000340058 TRBV10-3A0A0K0K1G6 114 aa10.26□□□□□ -0.77
RET-201ENST00000340058 X6R8D5 127 aa10.26□□□□□ -0.77
RET-201ENST00000340058 LINC00337Q8N6G1 96 aa10.26□□□□□ -0.77
RET-201ENST00000340058 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
RET-201ENST00000340058 WFDC9Q8NEX5 89 aa10.26□□□□□ -0.77
RET-201ENST00000340058 CELSR2Q9HCU4 2923 aa10.26□□□□□ -0.77
RET-201ENST00000340058 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
RET-201ENST00000340058 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
RET-201ENST00000340058 CRYBG3Q68DQ2 2970 aa10.25□□□□□ -0.77
RET-201ENST00000340058 CCKP06307 115 aa10.24□□□□□ -0.77
RET-201ENST00000340058 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
RET-201ENST00000340058 SMIM20Q8N5G0 67 aa10.24□□□□□ -0.77
RET-201ENST00000340058 LAMA5O15230 3695 aa10.24□□□□□ -0.77
RET-201ENST00000340058 NDUFV3P56181 108 aaKnown RBP10.23□□□□□ -0.77
RET-201ENST00000340058 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
RET-201ENST00000340058 SOSTDC1Q6X4U4 206 aa10.22□□□□□ -0.77
RET-201ENST00000340058 UPK3BQ9BT76 320 aa10.21□□□□□ -0.77
RET-201ENST00000340058 USP17L23D6RBM5 183 aa10.21□□□□□ -0.78
RET-201ENST00000340058 A0A1B0GUV1 79 aa10.21□□□□□ -0.78
RET-201ENST00000340058 NF1P21359 2839 aa10.2□□□□□ -0.78
RET-201ENST00000340058 ATOX1O00244 68 aa10.2□□□□□ -0.78
RET-201ENST00000340058 KRTAP1-3Q8IUG1 177 aa10.2□□□□□ -0.78
RET-201ENST00000340058 IGLV5-39A0A0G2JS06 123 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms