RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 KLK12Q9UKR0 248 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 LOC107984156A0A0G2JMH3 177 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 MIAQ16674 131 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 ARL17AQ8IVW1 177 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 C11orf45Q8TAV5 145 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 PRKDCP78527 4128 aaKnown RBP5.04□□□□□ -1.6
SRFBP1-201ENST00000339397 ESRGQ1W209 222 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 CHCHD10Q8WYQ3 142 aaPredicted RBP5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 PRO1854Q9UHT4 67 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 DEFB131BA0A096LNP1 70 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 MEIG1Q5JSS6 88 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 LELP1Q5T871 98 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
SRFBP1-201ENST00000339397 SS18Q15532 418 aa5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 ENHOQ6UWT2 76 aa5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 PFN2P35080 140 aa5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 WFDC2Q14508 124 aa5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 C9orf116Q5BN46 136 aaPredicted RBP5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 C6orf226Q5I0X4 101 aa5.02□□□□□ -1.61
SRFBP1-201ENST00000339397 MEGF8Q7Z7M0 2845 aa5.01□□□□□ -1.61
SRFBP1-201ENST00000339397 PSMB2P49721 201 aa5.01□□□□□ -1.61
SRFBP1-201ENST00000339397 C6orf223Q8N319 242 aa5.01□□□□□ -1.61
SRFBP1-201ENST00000339397 TM2D3Q9BRN9 247 aa5.01□□□□□ -1.61
SRFBP1-201ENST00000339397 TCL1BO95988 128 aa5.01□□□□□ -1.61
SRFBP1-201ENST00000339397 MIR7-3HGQ8N6C7 128 aa5.01□□□□□ -1.61
SRFBP1-201ENST00000339397 FOXI1Q12951 378 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 CIRBPQ14011 172 aaKnown RBP5□□□□□ -1.61
SRFBP1-201ENST00000339397 CD164L2Q6UWJ8 174 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 UBE2WQ96B02 151 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 TIMM17BO60830 172 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 LINC00158P58513 81 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 KIAA0087Q14695 138 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 ERG28Q9UKR5 140 aa5□□□□□ -1.61
SRFBP1-201ENST00000339397 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 TEX48A0A1B0GUV7 120 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 GAGE12HA6NDE8 117 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 SCGB1C2P0DMR2 95 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 Q1RN00 199 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 C10orf25Q5T742 122 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 SH2D6Q7Z4S9 175 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 COX7A2LO14548 114 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 TRIAP1O43715 76 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 SPATA25Q9BR10 227 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 PRR34Q9NV39 138 aa4.99□□□□□ -1.61
SRFBP1-201ENST00000339397 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 SMCPP49901 116 aaPredicted RBP4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 HERV-K104P63124 156 aa4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 PRR3P79522 188 aaKnown RBP4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 IFITM1P13164 125 aa4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 CCL18P55774 89 aa4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 ETDBQ3ZM63 59 aa4.98□□□□□ -1.61
SRFBP1-201ENST00000339397 DNAH1Q9P2D7 4330 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 H3BNG1 76 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 UNQ6190/PRO20217Q6UXQ8 127 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 PLA2G2DQ9UNK4 145 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 Q8IZM0 81 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 CLEC2BQ92478 149 aa4.97□□□□□ -1.61
SRFBP1-201ENST00000339397 CKS1BP61024 79 aa4.96□□□□□ -1.62
SRFBP1-201ENST00000339397 TGP01266 2768 aa4.96□□□□□ -1.62
SRFBP1-201ENST00000339397 IBA57-AS1B1ANH7 110 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 HIGD2BQ4VC39 106 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 KRTAP26-1Q6PEX3 210 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 Q8NDZ9 215 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 SND1-IT1Q9HBX3 110 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 LINC00588Q9Y4M8 146 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 PLECQ15149 4684 aaKnown RBP4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 CRPP02741 224 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 Q9HAA7 133 aa4.95□□□□□ -1.62
SRFBP1-201ENST00000339397 F8W1H4 67 aa4.94□□□□□ -1.62
SRFBP1-201ENST00000339397 TRAV10A0A0B4J240 114 aa4.94□□□□□ -1.62
SRFBP1-201ENST00000339397 TRBV30A0A0K0K1B3 111 aa4.94□□□□□ -1.62
SRFBP1-201ENST00000339397 SPAG11BQ08648 103 aa4.94□□□□□ -1.62
SRFBP1-201ENST00000339397 C9JAW5 83 aa4.93□□□□□ -1.62
SRFBP1-201ENST00000339397 CASC10Q5T4H9 136 aa4.93□□□□□ -1.62
SRFBP1-201ENST00000339397 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
SRFBP1-201ENST00000339397 IGKV2D-24A0A075B6R9 120 aa4.93□□□□□ -1.62
SRFBP1-201ENST00000339397 J3QR89 54 aa4.93□□□□□ -1.62
SRFBP1-201ENST00000339397 LINC01556Q5JQF7 62 aa4.92□□□□□ -1.62
SRFBP1-201ENST00000339397 LINC01561Q8N1V8 128 aa4.92□□□□□ -1.62
SRFBP1-201ENST00000339397 FAM218AQ96MZ4 157 aa4.92□□□□□ -1.62
SRFBP1-201ENST00000339397 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
SRFBP1-201ENST00000339397 TRBV20-1A0A075B6N2 111 aa4.92□□□□□ -1.62
SRFBP1-201ENST00000339397 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
SRFBP1-201ENST00000339397 TRAV8-4A0A0B4J246 113 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 SIGMAR1Q99720 223 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 XAGE1AQ9HD64 81 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 C6orf48Q9UBA6 75 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms