RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
NUDCD3-201ENST00000338427 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
NUDCD3-201ENST00000338427 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
NUDCD3-201ENST00000338427 Q8IZM0 81 aa8.03□□□□□ -1.12
NUDCD3-201ENST00000338427 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
NUDCD3-201ENST00000338427 K7EMI3 77 aa8.02□□□□□ -1.13
NUDCD3-201ENST00000338427 HERVK_113P63121 156 aa8.02□□□□□ -1.13
NUDCD3-201ENST00000338427 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
NUDCD3-201ENST00000338427 NPSP0C0P6 89 aa8.01□□□□□ -1.13
NUDCD3-201ENST00000338427 ERASQ7Z444 233 aa8.01□□□□□ -1.13
NUDCD3-201ENST00000338427 SMIM1B2RUZ4 78 aa8□□□□□ -1.13
NUDCD3-201ENST00000338427 RAB5BP61020 215 aa8□□□□□ -1.13
NUDCD3-201ENST00000338427 CST9LQ9H4G1 147 aa8□□□□□ -1.13
NUDCD3-201ENST00000338427 F8VRH5 84 aa7.99□□□□□ -1.13
NUDCD3-201ENST00000338427 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
NUDCD3-201ENST00000338427 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
NUDCD3-201ENST00000338427 PAPPA-AS1Q5QFB9 102 aa7.99□□□□□ -1.13
NUDCD3-201ENST00000338427 UQCC3Q6UW78 93 aa7.99□□□□□ -1.13
NUDCD3-201ENST00000338427 GNB1LQ9BYB4 327 aa7.99□□□□□ -1.13
NUDCD3-201ENST00000338427 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
NUDCD3-201ENST00000338427 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
NUDCD3-201ENST00000338427 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
NUDCD3-201ENST00000338427 G0S2P27469 103 aa7.98□□□□□ -1.13
NUDCD3-201ENST00000338427 SEC11AP67812 179 aa7.98□□□□□ -1.13
NUDCD3-201ENST00000338427 COX7B2Q8TF08 81 aa7.98□□□□□ -1.13
NUDCD3-201ENST00000338427 GAGE10A6NGK3 116 aa7.97□□□□□ -1.13
NUDCD3-201ENST00000338427 ZNF861PO60384 105 aa7.97□□□□□ -1.13
NUDCD3-201ENST00000338427 LINC00167Q96N53 147 aa7.97□□□□□ -1.13
NUDCD3-201ENST00000338427 SEC11CQ9BY50 192 aa7.97□□□□□ -1.13
NUDCD3-201ENST00000338427 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
NUDCD3-201ENST00000338427 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 SCO1O75880 301 aa7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 LBHQ53QV2 105 aaPredicted RBP7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 PDZD11Q5EBL8 140 aa7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 COMMD7Q86VX2 200 aa7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
NUDCD3-201ENST00000338427 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 S100PP25815 95 aa7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 PMVKQ15126 192 aa7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 FA2HQ7L5A8 372 aa7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 MRPL55Q7Z7F7 128 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 RPS10P5Q9NQ39 176 aa7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
NUDCD3-201ENST00000338427 A0A096LNJ9 63 aa7.94□□□□□ -1.14
NUDCD3-201ENST00000338427 NDUFA6P56556 154 aa7.94□□□□□ -1.14
NUDCD3-201ENST00000338427 TSPAN13O95857 204 aa7.93□□□□□ -1.14
NUDCD3-201ENST00000338427 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
NUDCD3-201ENST00000338427 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
NUDCD3-201ENST00000338427 NUPR1O60356 82 aa7.92□□□□□ -1.14
NUDCD3-201ENST00000338427 PFN2P35080 140 aa7.92□□□□□ -1.14
NUDCD3-201ENST00000338427 CXCL5P42830 114 aa7.92□□□□□ -1.14
NUDCD3-201ENST00000338427 SMCO4Q9NRQ5 59 aa7.92□□□□□ -1.14
NUDCD3-201ENST00000338427 A0A087X002 238 aa7.91□□□□□ -1.14
NUDCD3-201ENST00000338427 BCE1O60756 84 aa7.91□□□□□ -1.14
NUDCD3-201ENST00000338427 PRR4Q16378 134 aa7.91□□□□□ -1.14
NUDCD3-201ENST00000338427 TP73-AS1Q9UF72 201 aa7.91□□□□□ -1.14
NUDCD3-201ENST00000338427 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
NUDCD3-201ENST00000338427 TRAPPC1Q9Y5R8 145 aa7.9□□□□□ -1.14
NUDCD3-201ENST00000338427 LINC00614P0C842 121 aa7.89□□□□□ -1.15
NUDCD3-201ENST00000338427 IGLC3P0DOY3 106 aa7.89□□□□□ -1.15
NUDCD3-201ENST00000338427 ZNF22P17026 224 aaPredicted RBP7.89□□□□□ -1.15
NUDCD3-201ENST00000338427 COX19Q49B96 90 aa7.89□□□□□ -1.15
NUDCD3-201ENST00000338427 C18orf32Q8TCD1 76 aa7.89□□□□□ -1.15
NUDCD3-201ENST00000338427 CARHSP1Q9Y2V2 147 aaKnown RBP7.89□□□□□ -1.15
NUDCD3-201ENST00000338427 RPL28P46779 137 aaKnown RBP7.88□□□□□ -1.15
NUDCD3-201ENST00000338427 Q8NDZ9 215 aa7.88□□□□□ -1.15
NUDCD3-201ENST00000338427 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 IGLV5-39A0A0G2JS06 123 aa7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 H3BRM9 83 aa7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
NUDCD3-201ENST00000338427 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 ATP5LO75964 103 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 RHEBQ15382 184 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 BAGE3Q86Y29 109 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 KRTAP13-1Q8IUC0 172 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 SND1-IT1Q9HBX3 110 aa7.86□□□□□ -1.15
NUDCD3-201ENST00000338427 TMEM238C9JI98 176 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 HBDP02042 147 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 APOC3P02656 99 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 CRYGAP11844 174 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 VPREB1P12018 145 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 UBE2AP49459 152 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
NUDCD3-201ENST00000338427 A0A0U1RRA0 63 aa7.83□□□□□ -1.16
NUDCD3-201ENST00000338427 PRLHP81277 87 aa7.83□□□□□ -1.16
NUDCD3-201ENST00000338427 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
NUDCD3-201ENST00000338427 MUC2Q02817 5179 aa7.82□□□□□ -1.16
NUDCD3-201ENST00000338427 FAM19A1Q7Z5A9 133 aa7.81□□□□□ -1.16
NUDCD3-201ENST00000338427 TMEM126AQ9H061 195 aa7.8□□□□□ -1.16
NUDCD3-201ENST00000338427 CHTOPQ9Y3Y2 248 aaKnown RBP7.8□□□□□ -1.16
NUDCD3-201ENST00000338427 M0R378 163 aa7.79□□□□□ -1.16
NUDCD3-201ENST00000338427 LINC00158P58513 81 aa7.79□□□□□ -1.16
NUDCD3-201ENST00000338427 YPEL4Q96NS1 127 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms