RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 TRBV30A0A0K0K1B3 111 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 XGP55808 180 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 C6orf223Q8N319 242 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 OR13C6PQ8NH95 151 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 SIGMAR1Q99720 223 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 PPDPFLQ8WWR9 84 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
SNCA-201ENST00000336904 IGKV2-28A0A075B6P5 120 aa6.09□□□□□ -1.44
SNCA-201ENST00000336904 IGKV2D-28P01615 120 aa6.09□□□□□ -1.44
SNCA-201ENST00000336904 ATP5G1P05496 136 aa6.09□□□□□ -1.44
SNCA-201ENST00000336904 APOC4P55056 127 aa6.09□□□□□ -1.44
SNCA-201ENST00000336904 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.44
SNCA-201ENST00000336904 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.44
SNCA-201ENST00000336904 CCL18P55774 89 aa6.08□□□□□ -1.44
SNCA-201ENST00000336904 KLK12Q9UKR0 248 aa6.08□□□□□ -1.44
SNCA-201ENST00000336904 TRAV8-4A0A0B4J246 113 aa6.08□□□□□ -1.44
SNCA-201ENST00000336904 COX6CP09669 75 aa6.08□□□□□ -1.44
SNCA-201ENST00000336904 A0A087WZ39 114 aa6.07□□□□□ -1.44
SNCA-201ENST00000336904 TIMM17BO60830 172 aa6.07□□□□□ -1.44
SNCA-201ENST00000336904 SS18Q15532 418 aa6.07□□□□□ -1.44
SNCA-201ENST00000336904 CHCHD10Q8WYQ3 142 aaPredicted RBP6.07□□□□□ -1.44
SNCA-201ENST00000336904 IFITM1P13164 125 aa6.07□□□□□ -1.44
SNCA-201ENST00000336904 REG3AQ06141 175 aa6.07□□□□□ -1.44
SNCA-201ENST00000336904 FAM19A3Q7Z5A8 133 aa6.07□□□□□ -1.44
SNCA-201ENST00000336904 LST1O00453 97 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 SLPIP03973 132 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 MALP21145 153 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 LYRM9A8MSI8 78 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 CRPP02741 224 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 C10orf25Q5T742 122 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 Q6ZTC4 211 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
SNCA-201ENST00000336904 SMIM9A6NGZ8 99 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 SPART-AS1P0CW21 52 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 CKS1BP61024 79 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 UBE2WQ96B02 151 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 A0A087WYN8 130 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 HERV-K104P63124 156 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 C3orf56Q8N813 242 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 SMIM11BQ8TCY0 68 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 MRAPQ8TCY5 172 aa6.05□□□□□ -1.44
SNCA-201ENST00000336904 WFDC10BQ8IUB3 73 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 Q8NDZ9 215 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 RNF183Q96D59 192 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 CMYA5Q8N3K9 4069 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 NCR3O14931 201 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 TTC32Q5I0X7 151 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 NANOS2P60321 138 aaKnown RBP6.04□□□□□ -1.44
SNCA-201ENST00000336904 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
SNCA-201ENST00000336904 UNQ6190/PRO20217Q6UXQ8 127 aa6.04□□□□□ -1.44
SNCA-201ENST00000336904 COX7A2LO14548 114 aa6.03□□□□□ -1.44
SNCA-201ENST00000336904 MIFP14174 115 aa6.03□□□□□ -1.44
SNCA-201ENST00000336904 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
SNCA-201ENST00000336904 CFAP161Q6P656 301 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 SHISA2Q6UWI4 295 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 TENM2Q9NT68 2774 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 A0A0J9YWU9 116 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 WFDC9Q8NEX5 89 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 LYSTQ99698 3801 aa6.02□□□□□ -1.45
SNCA-201ENST00000336904 MRPL23Q16540 153 aaKnown RBP6.01□□□□□ -1.45
SNCA-201ENST00000336904 XAGE1AQ9HD64 81 aa6.01□□□□□ -1.45
SNCA-201ENST00000336904 CSMD3Q7Z407 3707 aa6.01□□□□□ -1.45
SNCA-201ENST00000336904 LECT2O14960 151 aa6.01□□□□□ -1.45
SNCA-201ENST00000336904 BAALC-AS2P0C853 105 aa6.01□□□□□ -1.45
SNCA-201ENST00000336904 KIAA0087Q14695 138 aa6.01□□□□□ -1.45
SNCA-201ENST00000336904 KPRPQ5T749 579 aaPredicted RBP6.01□□□□□ -1.45
SNCA-201ENST00000336904 STAB2Q8WWQ8 2551 aa6□□□□□ -1.45
SNCA-201ENST00000336904 IBA57-AS1B1ANH7 110 aa6□□□□□ -1.45
SNCA-201ENST00000336904 CD164L2Q6UWJ8 174 aa6□□□□□ -1.45
SNCA-201ENST00000336904 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
SNCA-201ENST00000336904 ENHOQ6UWT2 76 aa6□□□□□ -1.45
SNCA-201ENST00000336904 C15orf53Q8NAA6 179 aa6□□□□□ -1.45
SNCA-201ENST00000336904 SPAG11BQ08648 103 aa6□□□□□ -1.45
SNCA-201ENST00000336904 COL7A1Q02388 2944 aa6□□□□□ -1.45
SNCA-201ENST00000336904 Q8IZM0 81 aa5.99□□□□□ -1.45
SNCA-201ENST00000336904 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
SNCA-201ENST00000336904 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
SNCA-201ENST00000336904 DEFB121Q5J5C9 76 aa5.98□□□□□ -1.45
SNCA-201ENST00000336904 LELP1Q5T871 98 aa5.98□□□□□ -1.45
SNCA-201ENST00000336904 H3BT86 120 aa5.97□□□□□ -1.45
SNCA-201ENST00000336904 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
SNCA-201ENST00000336904 ESRGQ1W209 222 aa5.97□□□□□ -1.45
SNCA-201ENST00000336904 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
SNCA-201ENST00000336904 DNAL4O96015 105 aa5.96□□□□□ -1.45
SNCA-201ENST00000336904 RPL28P46779 137 aaKnown RBP5.96□□□□□ -1.45
SNCA-201ENST00000336904 RPL18AQ02543 176 aaKnown RBP5.96□□□□□ -1.45
SNCA-201ENST00000336904 GAGE2AQ6NT46 116 aa5.96□□□□□ -1.45
SNCA-201ENST00000336904 SNCGO76070 127 aa5.96□□□□□ -1.46
SNCA-201ENST00000336904 DEFB131BA0A096LNP1 70 aa5.95□□□□□ -1.46
SNCA-201ENST00000336904 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
SNCA-201ENST00000336904 GAGE2EQ4V326 116 aa5.94□□□□□ -1.46
SNCA-201ENST00000336904 C6orf99Q4VX62 202 aa5.94□□□□□ -1.46
SNCA-201ENST00000336904 GAGE2DQ9UEU5 116 aa5.94□□□□□ -1.46
SNCA-201ENST00000336904 IGKV2D-24A0A075B6R9 120 aa5.94□□□□□ -1.46
SNCA-201ENST00000336904 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
SNCA-201ENST00000336904 C6orf48Q9UBA6 75 aa5.94□□□□□ -1.46
SNCA-201ENST00000336904 C11orf45Q8TAV5 145 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms