RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ZNF73O43830 326 aaPredicted RBP10.61□□□□□ -0.71
C9orf47-201ENST00000334490 PLAC8L1A1L4L8 177 aa10.61□□□□□ -0.71
C9orf47-201ENST00000334490 C2orf91Q6ZV80 131 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 SMIM11BQ8TCY0 68 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 ITPR3Q14573 2671 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 TEX49A0A1B0GTD5 131 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 C1orf134Q5TEV5 83 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 AMELXQ99217 191 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 IGLV5-52A0A0A0MRZ9 124 aa10.6□□□□□ -0.71
C9orf47-201ENST00000334490 A0A0C4DFX4 3053 aa10.59□□□□□ -0.71
C9orf47-201ENST00000334490 M0QXV9 152 aa10.59□□□□□ -0.71
C9orf47-201ENST00000334490 ZNF706Q9Y5V0 76 aaPredicted RBP10.59□□□□□ -0.71
C9orf47-201ENST00000334490 CCKP06307 115 aa10.59□□□□□ -0.71
C9orf47-201ENST00000334490 KIF25-AS1Q9Y6Z4 181 aa10.59□□□□□ -0.71
C9orf47-201ENST00000334490 FAM236AA0A1B0GUQ0 79 aa10.59□□□□□ -0.71
C9orf47-201ENST00000334490 FAM236BA0A1B0GV22 79 aa10.59□□□□□ -0.71
C9orf47-201ENST00000334490 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
C9orf47-201ENST00000334490 BPTFQ12830 3046 aa10.58□□□□□ -0.72
C9orf47-201ENST00000334490 A0A096LNJ9 63 aa10.56□□□□□ -0.72
C9orf47-201ENST00000334490 ATOX1O00244 68 aa10.55□□□□□ -0.72
C9orf47-201ENST00000334490 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
C9orf47-201ENST00000334490 LINC00643Q86TS7 51 aa10.55□□□□□ -0.72
C9orf47-201ENST00000334490 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
C9orf47-201ENST00000334490 ZNF292O60281 2723 aa10.54□□□□□ -0.72
C9orf47-201ENST00000334490 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
C9orf47-201ENST00000334490 X6R8D5 127 aa10.54□□□□□ -0.72
C9orf47-201ENST00000334490 C3orf84H3BNL1 204 aa10.54□□□□□ -0.72
C9orf47-201ENST00000334490 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
C9orf47-201ENST00000334490 A0A096LNT2 108 aa10.53□□□□□ -0.72
C9orf47-201ENST00000334490 IGLV9-49A0A0B4J1Y8 123 aa10.53□□□□□ -0.72
C9orf47-201ENST00000334490 TRBV10-3A0A0K0K1G6 114 aa10.53□□□□□ -0.72
C9orf47-201ENST00000334490 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
C9orf47-201ENST00000334490 HRCT1Q6UXD1 115 aa10.53□□□□□ -0.72
C9orf47-201ENST00000334490 NDUFC2-KCTD14E9PQ53 114 aa10.53□□□□□ -0.72
C9orf47-201ENST00000334490 LST1O00453 97 aa10.52□□□□□ -0.73
C9orf47-201ENST00000334490 ESRGQ1W209 222 aa10.52□□□□□ -0.73
C9orf47-201ENST00000334490 MDFIQ99750 246 aa10.52□□□□□ -0.73
C9orf47-201ENST00000334490 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
C9orf47-201ENST00000334490 RPL28P46779 137 aaKnown RBP10.51□□□□□ -0.73
C9orf47-201ENST00000334490 UPK3BQ9BT76 320 aa10.51□□□□□ -0.73
C9orf47-201ENST00000334490 CHKB-CPT1BH3BT56 60 aa10.51□□□□□ -0.73
C9orf47-201ENST00000334490 IGKV4-1P06312 121 aa10.51□□□□□ -0.73
C9orf47-201ENST00000334490 C2orf48Q96LS8 159 aa10.51□□□□□ -0.73
C9orf47-201ENST00000334490 BRCA2P51587 3418 aa10.5□□□□□ -0.73
C9orf47-201ENST00000334490 LINC00315P59091 139 aa10.5□□□□□ -0.73
C9orf47-201ENST00000334490 TRANK1O15050 2925 aa10.5□□□□□ -0.73
C9orf47-201ENST00000334490 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
C9orf47-201ENST00000334490 SS18L2Q9UHA2 77 aa10.49□□□□□ -0.73
C9orf47-201ENST00000334490 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
C9orf47-201ENST00000334490 ADAMTSL4-AS1Q5T5F5 129 aa10.48□□□□□ -0.73
C9orf47-201ENST00000334490 Q6ZRU5 148 aa10.48□□□□□ -0.73
C9orf47-201ENST00000334490 KLK9Q2XQG4 91 aa10.47□□□□□ -0.73
C9orf47-201ENST00000334490 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
C9orf47-201ENST00000334490 REG3GQ6UW15 175 aa10.47□□□□□ -0.73
C9orf47-201ENST00000334490 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
C9orf47-201ENST00000334490 SMIM20Q8N5G0 67 aa10.47□□□□□ -0.73
C9orf47-201ENST00000334490 F8WDY8 70 aa10.46□□□□□ -0.73
C9orf47-201ENST00000334490 B5MCH6 92 aa10.45□□□□□ -0.74
C9orf47-201ENST00000334490 Q9UF83 564 aa10.45□□□□□ -0.74
C9orf47-201ENST00000334490 NDUFV3P56181 108 aaKnown RBP10.45□□□□□ -0.74
C9orf47-201ENST00000334490 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
C9orf47-201ENST00000334490 PRUNE2Q8WUY3 3088 aa10.44□□□□□ -0.74
C9orf47-201ENST00000334490 Q8NAQ8 132 aa10.44□□□□□ -0.74
C9orf47-201ENST00000334490 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
C9orf47-201ENST00000334490 TEP1Q99973 2627 aaKnown RBP10.44□□□□□ -0.74
C9orf47-201ENST00000334490 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
C9orf47-201ENST00000334490 MRPL55Q7Z7F7 128 aaKnown RBP10.43□□□□□ -0.74
C9orf47-201ENST00000334490 H3BNG1 76 aa10.42□□□□□ -0.74
C9orf47-201ENST00000334490 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
C9orf47-201ENST00000334490 MGAQ8IWI9 3026 aa10.42□□□□□ -0.74
C9orf47-201ENST00000334490 C10orf25Q5T742 122 aa10.41□□□□□ -0.74
C9orf47-201ENST00000334490 ATP5EP2Q5VTU8 51 aa10.41□□□□□ -0.74
C9orf47-201ENST00000334490 SETXQ7Z333 2677 aaKnown RBP10.41□□□□□ -0.74
C9orf47-201ENST00000334490 TMEM258P61165 79 aa10.4□□□□□ -0.74
C9orf47-201ENST00000334490 NDUFC2O95298 119 aa10.39□□□□□ -0.75
C9orf47-201ENST00000334490 Q8N814 137 aa10.39□□□□□ -0.75
C9orf47-201ENST00000334490 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
C9orf47-201ENST00000334490 WFDC13Q8IUB5 93 aa10.38□□□□□ -0.75
C9orf47-201ENST00000334490 KRTAP1-3Q8IUG1 177 aa10.38□□□□□ -0.75
C9orf47-201ENST00000334490 MT-ATP8P03928 68 aa10.37□□□□□ -0.75
C9orf47-201ENST00000334490 IGLV5-39A0A0G2JS06 123 aa10.35□□□□□ -0.75
C9orf47-201ENST00000334490 A0A087WYN8 130 aa10.35□□□□□ -0.75
C9orf47-201ENST00000334490 PRYO14603 147 aa10.35□□□□□ -0.75
C9orf47-201ENST00000334490 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
C9orf47-201ENST00000334490 Q8N3U1 123 aa10.34□□□□□ -0.75
C9orf47-201ENST00000334490 CASC2Q6XLA1 102 aa10.34□□□□□ -0.75
C9orf47-201ENST00000334490 C20orf197Q8N268 126 aa10.34□□□□□ -0.75
C9orf47-201ENST00000334490 A8MTW9 85 aa10.34□□□□□ -0.75
C9orf47-201ENST00000334490 C5orf47Q569G3 176 aa10.34□□□□□ -0.75
C9orf47-201ENST00000334490 WWC2-AS2Q96NR7 200 aa10.33□□□□□ -0.76
C9orf47-201ENST00000334490 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
C9orf47-201ENST00000334490 WDFY4Q6ZS81 3184 aa10.33□□□□□ -0.76
C9orf47-201ENST00000334490 PRLHP81277 87 aa10.33□□□□□ -0.76
C9orf47-201ENST00000334490 K7EIL1 84 aa10.33□□□□□ -0.76
C9orf47-201ENST00000334490 KRTAP10-3P60369 221 aa10.33□□□□□ -0.76
C9orf47-201ENST00000334490 NBDYA0A0U1RRE5 68 aa10.32□□□□□ -0.76
C9orf47-201ENST00000334490 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
C9orf47-201ENST00000334490 Q9BRP9 147 aa10.32□□□□□ -0.76
C9orf47-201ENST00000334490 LINC01546A6NGU7 62 aa10.31□□□□□ -0.76
C9orf47-201ENST00000334490 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms