RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SFTA2Q6UW10 78 aa11.49□□□□□ -0.57
DDX41-201ENST00000330503 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
DDX41-201ENST00000330503 Q8IZM0 81 aa11.48□□□□□ -0.57
DDX41-201ENST00000330503 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
DDX41-201ENST00000330503 ERG28Q9UKR5 140 aa11.47□□□□□ -0.57
DDX41-201ENST00000330503 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
DDX41-201ENST00000330503 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.57
DDX41-201ENST00000330503 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.57
DDX41-201ENST00000330503 H7C2G1 150 aa11.45□□□□□ -0.58
DDX41-201ENST00000330503 IBA57-AS1B1ANH7 110 aa11.45□□□□□ -0.58
DDX41-201ENST00000330503 C2orf82Q6UX34 121 aa11.45□□□□□ -0.58
DDX41-201ENST00000330503 H3BMG7 143 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 MIR7-3HGQ8N6C7 128 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 UBE2WQ96B02 151 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 DNAH9Q9NYC9 4486 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 MALP21145 153 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 LINC00158P58513 81 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 PPDPFQ9H3Y8 114 aa11.44□□□□□ -0.58
DDX41-201ENST00000330503 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
DDX41-201ENST00000330503 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
DDX41-201ENST00000330503 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
DDX41-201ENST00000330503 PFN2P35080 140 aa11.41□□□□□ -0.58
DDX41-201ENST00000330503 PSMB2P49721 201 aa11.41□□□□□ -0.58
DDX41-201ENST00000330503 CRPP02741 224 aa11.41□□□□□ -0.58
DDX41-201ENST00000330503 KRTAP26-1Q6PEX3 210 aa11.41□□□□□ -0.58
DDX41-201ENST00000330503 TCL1BO95988 128 aa11.4□□□□□ -0.58
DDX41-201ENST00000330503 CKS1BP61024 79 aa11.4□□□□□ -0.58
DDX41-201ENST00000330503 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
DDX41-201ENST00000330503 C15orf53Q8NAA6 179 aa11.4□□□□□ -0.58
DDX41-201ENST00000330503 SCGB1C2P0DMR2 95 aa11.39□□□□□ -0.59
DDX41-201ENST00000330503 Q1RN00 199 aa11.39□□□□□ -0.59
DDX41-201ENST00000330503 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
DDX41-201ENST00000330503 RPL13AP40429 203 aaKnown RBP11.39□□□□□ -0.59
DDX41-201ENST00000330503 CCL18P55774 89 aa11.39□□□□□ -0.59
DDX41-201ENST00000330503 PRO0461Q9UI25 63 aa11.39□□□□□ -0.59
DDX41-201ENST00000330503 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
DDX41-201ENST00000330503 LYRM7Q5U5X0 104 aa11.38□□□□□ -0.59
DDX41-201ENST00000330503 TRIAP1O43715 76 aa11.38□□□□□ -0.59
DDX41-201ENST00000330503 CXCL5P42830 114 aa11.38□□□□□ -0.59
DDX41-201ENST00000330503 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
DDX41-201ENST00000330503 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
DDX41-201ENST00000330503 TRBV20-1A0A075B6N2 111 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 WFDC2Q14508 124 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 B9D2Q9BPU9 175 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 F8W1H4 67 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 SPAG11BQ08648 103 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 MTURNQ8N3F0 131 aa11.36□□□□□ -0.59
DDX41-201ENST00000330503 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
DDX41-201ENST00000330503 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
DDX41-201ENST00000330503 C10orf25Q5T742 122 aa11.35□□□□□ -0.59
DDX41-201ENST00000330503 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
DDX41-201ENST00000330503 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
DDX41-201ENST00000330503 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
DDX41-201ENST00000330503 UNQ6190/PRO20217Q6UXQ8 127 aa11.35□□□□□ -0.59
DDX41-201ENST00000330503 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
DDX41-201ENST00000330503 COX17Q14061 63 aa11.33□□□□□ -0.6
DDX41-201ENST00000330503 LINC00337Q8N6G1 96 aa11.32□□□□□ -0.6
DDX41-201ENST00000330503 OCIAD2Q56VL3 154 aa11.32□□□□□ -0.6
DDX41-201ENST00000330503 NTN5Q8WTR8 489 aaPredicted RBP11.31□□□□□ -0.6
DDX41-201ENST00000330503 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
DDX41-201ENST00000330503 TRAV13-2A0A0B4J235 113 aa11.29□□□□□ -0.6
DDX41-201ENST00000330503 C1orf43Q9BWL3 253 aa11.29□□□□□ -0.6
DDX41-201ENST00000330503 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
DDX41-201ENST00000330503 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
DDX41-201ENST00000330503 IGKV2D-24A0A075B6R9 120 aa11.28□□□□□ -0.6
DDX41-201ENST00000330503 COX6CP09669 75 aa11.28□□□□□ -0.6
DDX41-201ENST00000330503 ATXN8Q156A1 80 aa11.27□□□□□ -0.6
DDX41-201ENST00000330503 HIGD2BQ4VC39 106 aa11.27□□□□□ -0.6
DDX41-201ENST00000330503 CLEC2BQ92478 149 aa11.27□□□□□ -0.6
DDX41-201ENST00000330503 DNAH1Q9P2D7 4330 aa11.27□□□□□ -0.61
DDX41-201ENST00000330503 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
DDX41-201ENST00000330503 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
DDX41-201ENST00000330503 UPK3BQ9BT76 320 aa11.26□□□□□ -0.61
DDX41-201ENST00000330503 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
DDX41-201ENST00000330503 Q9HAA7 133 aa11.26□□□□□ -0.61
DDX41-201ENST00000330503 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
DDX41-201ENST00000330503 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
DDX41-201ENST00000330503 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
DDX41-201ENST00000330503 C9JAW5 83 aa11.24□□□□□ -0.61
DDX41-201ENST00000330503 Q8NDZ9 215 aa11.24□□□□□ -0.61
DDX41-201ENST00000330503 LST1O00453 97 aa11.23□□□□□ -0.61
DDX41-201ENST00000330503 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
DDX41-201ENST00000330503 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
DDX41-201ENST00000330503 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
DDX41-201ENST00000330503 NDUFC2O95298 119 aa11.22□□□□□ -0.61
DDX41-201ENST00000330503 SMIM11BQ8TCY0 68 aa11.22□□□□□ -0.61
DDX41-201ENST00000330503 MUC7Q8TAX7 377 aa11.21□□□□□ -0.61
DDX41-201ENST00000330503 C2orf48Q96LS8 159 aa11.21□□□□□ -0.61
DDX41-201ENST00000330503 CAMK2N2Q96S95 79 aa11.21□□□□□ -0.61
DDX41-201ENST00000330503 K7ERU9 68 aa11.21□□□□□ -0.62
DDX41-201ENST00000330503 SLC25A20O43772 301 aa11.21□□□□□ -0.62
DDX41-201ENST00000330503 Q6ZRU5 148 aa11.2□□□□□ -0.62
DDX41-201ENST00000330503 DNHD1Q96M86 4753 aa11.2□□□□□ -0.62
DDX41-201ENST00000330503 CASC10Q5T4H9 136 aa11.2□□□□□ -0.62
DDX41-201ENST00000330503 OR13C6PQ8NH95 151 aa11.2□□□□□ -0.62
DDX41-201ENST00000330503 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
DDX41-201ENST00000330503 M0QXV9 152 aa11.18□□□□□ -0.62
DDX41-201ENST00000330503 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms