RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 LINC00526Q96FQ7 95 aa8.93□□□□□ -0.98
CTHRC1-201ENST00000330295 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
CTHRC1-201ENST00000330295 TIMM17AQ99595 171 aa8.93□□□□□ -0.98
CTHRC1-201ENST00000330295 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
CTHRC1-201ENST00000330295 ERASQ7Z444 233 aa8.92□□□□□ -0.98
CTHRC1-201ENST00000330295 ORAOV1Q8WV07 137 aa8.92□□□□□ -0.98
CTHRC1-201ENST00000330295 FAM104AQ969W3 186 aa8.92□□□□□ -0.98
CTHRC1-201ENST00000330295 A0A087WZ39 114 aa8.91□□□□□ -0.98
CTHRC1-201ENST00000330295 A0A096LNI7 61 aa8.91□□□□□ -0.98
CTHRC1-201ENST00000330295 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
CTHRC1-201ENST00000330295 AMELXQ99217 191 aa8.91□□□□□ -0.98
CTHRC1-201ENST00000330295 KRTAP4-8A0A0G2JLE6 195 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 UBE2D1P51668 147 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 RAB5BP61020 215 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 KRTAP9-9Q9BYP9 154 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 KRTAP9-4Q9BYQ2 154 aa8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.98
CTHRC1-201ENST00000330295 IGLV1-50A0A075B6I6 118 aa8.89□□□□□ -0.99
CTHRC1-201ENST00000330295 LINC01546A6NGU7 62 aa8.89□□□□□ -0.99
CTHRC1-201ENST00000330295 NDUFA1O15239 70 aa8.89□□□□□ -0.99
CTHRC1-201ENST00000330295 PRSS2P07478 247 aa8.89□□□□□ -0.99
CTHRC1-201ENST00000330295 HERVK_113P63121 156 aa8.89□□□□□ -0.99
CTHRC1-201ENST00000330295 RNF151Q2KHN1 245 aa8.89□□□□□ -0.99
CTHRC1-201ENST00000330295 GHRHP01286 108 aa8.88□□□□□ -0.99
CTHRC1-201ENST00000330295 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
CTHRC1-201ENST00000330295 LINC00614P0C842 121 aa8.87□□□□□ -0.99
CTHRC1-201ENST00000330295 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.86□□□□□ -0.99
CTHRC1-201ENST00000330295 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
CTHRC1-201ENST00000330295 LINC00173Q6ZV60 143 aa8.86□□□□□ -0.99
CTHRC1-201ENST00000330295 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
CTHRC1-201ENST00000330295 PTTG1IPP53801 180 aa8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 CKS1BP61024 79 aa8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 RPL18AQ02543 176 aaKnown RBP8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 ZC2HC1BQ5TFG8 222 aa8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 FAM19A3Q7Z5A8 133 aa8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 C18orf32Q8TCD1 76 aa8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 DIRC1Q969H9 104 aa8.85□□□□□ -0.99
CTHRC1-201ENST00000330295 PMVKQ15126 192 aa8.84□□□□□ -0.99
CTHRC1-201ENST00000330295 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
CTHRC1-201ENST00000330295 HBDP02042 147 aa8.83□□□□□ -1
CTHRC1-201ENST00000330295 SLC7A5P1Q8MH63 180 aa8.83□□□□□ -1
CTHRC1-201ENST00000330295 LINC00469Q8N7U9 141 aa8.83□□□□□ -1
CTHRC1-201ENST00000330295 CST9LQ9H4G1 147 aa8.83□□□□□ -1
CTHRC1-201ENST00000330295 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
CTHRC1-201ENST00000330295 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
CTHRC1-201ENST00000330295 TINCRA0A1B0GVN0 87 aa8.82□□□□□ -1
CTHRC1-201ENST00000330295 ATP5LO75964 103 aa8.82□□□□□ -1
CTHRC1-201ENST00000330295 NDUFA6P56556 154 aa8.82□□□□□ -1
CTHRC1-201ENST00000330295 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
CTHRC1-201ENST00000330295 H3BRM9 83 aa8.81□□□□□ -1
CTHRC1-201ENST00000330295 TSPAN13O95857 204 aa8.81□□□□□ -1
CTHRC1-201ENST00000330295 C1orf137Q5JT78 98 aa8.81□□□□□ -1
CTHRC1-201ENST00000330295 CBLN2Q8IUK8 224 aa8.81□□□□□ -1
CTHRC1-201ENST00000330295 YPEL4Q96NS1 127 aa8.81□□□□□ -1
CTHRC1-201ENST00000330295 CDKN2A-AS1Q9UH64 79 aa8.81□□□□□ -1
CTHRC1-201ENST00000330295 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
CTHRC1-201ENST00000330295 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
CTHRC1-201ENST00000330295 KIAA0087Q14695 138 aa8.8□□□□□ -1
CTHRC1-201ENST00000330295 Q8IZM0 81 aa8.8□□□□□ -1
CTHRC1-201ENST00000330295 CHCHD1Q96BP2 118 aaKnown RBP8.8□□□□□ -1
CTHRC1-201ENST00000330295 CDIP1Q9H305 208 aa8.8□□□□□ -1
CTHRC1-201ENST00000330295 H0Y9J4 135 aa8.79□□□□□ -1
CTHRC1-201ENST00000330295 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
CTHRC1-201ENST00000330295 CXCL5P42830 114 aa8.79□□□□□ -1
CTHRC1-201ENST00000330295 PDZD11Q5EBL8 140 aa8.79□□□□□ -1
CTHRC1-201ENST00000330295 C6orf48Q9UBA6 75 aa8.79□□□□□ -1
CTHRC1-201ENST00000330295 C10orf25Q5T742 122 aa8.78□□□□□ -1
CTHRC1-201ENST00000330295 C2orf82Q6UX34 121 aa8.78□□□□□ -1
CTHRC1-201ENST00000330295 BAGE3Q86Y29 109 aa8.78□□□□□ -1
CTHRC1-201ENST00000330295 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
CTHRC1-201ENST00000330295 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
CTHRC1-201ENST00000330295 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
CTHRC1-201ENST00000330295 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
CTHRC1-201ENST00000330295 NDUFC2-KCTD14E9PQ53 114 aa8.76□□□□□ -1.01
CTHRC1-201ENST00000330295 F8VRH5 84 aa8.76□□□□□ -1.01
CTHRC1-201ENST00000330295 IGLV7-43P04211 117 aa8.76□□□□□ -1.01
CTHRC1-201ENST00000330295 PMCHL1Q16048 86 aa8.76□□□□□ -1.01
CTHRC1-201ENST00000330295 URB1-AS1Q96HZ7 61 aa8.76□□□□□ -1.01
CTHRC1-201ENST00000330295 SMIM1B2RUZ4 78 aa8.75□□□□□ -1.01
CTHRC1-201ENST00000330295 HSBP1O75506 76 aa8.75□□□□□ -1.01
CTHRC1-201ENST00000330295 COX7B2Q8TF08 81 aa8.75□□□□□ -1.01
CTHRC1-201ENST00000330295 A0A096LNJ9 63 aa8.74□□□□□ -1.01
CTHRC1-201ENST00000330295 TRGC2P03986 189 aa8.74□□□□□ -1.01
CTHRC1-201ENST00000330295 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
CTHRC1-201ENST00000330295 TPRXLQ17RH7 258 aa8.74□□□□□ -1.01
CTHRC1-201ENST00000330295 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
CTHRC1-201ENST00000330295 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
CTHRC1-201ENST00000330295 CRYGAP11844 174 aa8.72□□□□□ -1.01
CTHRC1-201ENST00000330295 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
CTHRC1-201ENST00000330295 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
CTHRC1-201ENST00000330295 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.02
CTHRC1-201ENST00000330295 FAM19A5Q7Z5A7 132 aaPredicted RBP8.7□□□□□ -1.02
CTHRC1-201ENST00000330295 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
CTHRC1-201ENST00000330295 COLCA2A8K830 154 aa8.69□□□□□ -1.02
CTHRC1-201ENST00000330295 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
CTHRC1-201ENST00000330295 SFTA2Q6UW10 78 aa8.69□□□□□ -1.02
CTHRC1-201ENST00000330295 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms