RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 KLK12Q9UKR0 248 aa12.65□□□□□ -0.39
EXOSC3-201ENST00000327304 ADAMTSL4-AS1Q5T5F5 129 aa12.64□□□□□ -0.39
EXOSC3-201ENST00000327304 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
EXOSC3-201ENST00000327304 CHCHD10Q8WYQ3 142 aaPredicted RBP12.64□□□□□ -0.39
EXOSC3-201ENST00000327304 IFITM1P13164 125 aa12.63□□□□□ -0.39
EXOSC3-201ENST00000327304 UBE2V1Q13404 147 aa12.62□□□□□ -0.39
EXOSC3-201ENST00000327304 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
EXOSC3-201ENST00000327304 A0A1W2PPM0 123 aa12.61□□□□□ -0.39
EXOSC3-201ENST00000327304 A4D1N5 150 aa12.61□□□□□ -0.39
EXOSC3-201ENST00000327304 COX7A2LO14548 114 aa12.61□□□□□ -0.39
EXOSC3-201ENST00000327304 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
EXOSC3-201ENST00000327304 PRSS2P07478 247 aa12.6□□□□□ -0.39
EXOSC3-201ENST00000327304 CFC1BP0CG36 223 aa12.6□□□□□ -0.39
EXOSC3-201ENST00000327304 CFC1P0CG37 223 aa12.6□□□□□ -0.39
EXOSC3-201ENST00000327304 Q8IZM0 81 aa12.6□□□□□ -0.39
EXOSC3-201ENST00000327304 APOMO95445 188 aa12.6□□□□□ -0.39
EXOSC3-201ENST00000327304 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
EXOSC3-201ENST00000327304 MEIG1Q5JSS6 88 aa12.59□□□□□ -0.39
EXOSC3-201ENST00000327304 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
EXOSC3-201ENST00000327304 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
EXOSC3-201ENST00000327304 IGLV10-54A0A075B6I4 117 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 A0A0B4J2C4 111 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 FOXI1Q12951 378 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 LINC00476Q8WZB0 136 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 UBE2WQ96B02 151 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 NAA38Q9BRA0 125 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 KRTAP1-5Q9BYS1 174 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 CRPP02741 224 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 FABP2P12104 132 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 PPDPFQ9H3Y8 114 aa12.58□□□□□ -0.4
EXOSC3-201ENST00000327304 LY6G6CO95867 125 aa12.57□□□□□ -0.4
EXOSC3-201ENST00000327304 C6orf226Q5I0X4 101 aa12.57□□□□□ -0.4
EXOSC3-201ENST00000327304 GTF2H5Q6ZYL4 71 aa12.56□□□□□ -0.4
EXOSC3-201ENST00000327304 PGPEP1Q9NXJ5 209 aa12.56□□□□□ -0.4
EXOSC3-201ENST00000327304 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
EXOSC3-201ENST00000327304 GAGE10A6NGK3 116 aa12.55□□□□□ -0.4
EXOSC3-201ENST00000327304 IBA57-AS1B1ANH7 110 aa12.55□□□□□ -0.4
EXOSC3-201ENST00000327304 MALP21145 153 aa12.55□□□□□ -0.4
EXOSC3-201ENST00000327304 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
EXOSC3-201ENST00000327304 DNAH6Q9C0G6 4158 aa12.54□□□□□ -0.4
EXOSC3-201ENST00000327304 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
EXOSC3-201ENST00000327304 K7EP34 96 aa12.54□□□□□ -0.4
EXOSC3-201ENST00000327304 CXCL5P42830 114 aa12.54□□□□□ -0.4
EXOSC3-201ENST00000327304 NBDYA0A0U1RRE5 68 aa12.53□□□□□ -0.4
EXOSC3-201ENST00000327304 DAND5Q8N907 189 aa12.53□□□□□ -0.4
EXOSC3-201ENST00000327304 Q9HAA7 133 aa12.53□□□□□ -0.4
EXOSC3-201ENST00000327304 TSPAN13O95857 204 aa12.53□□□□□ -0.4
EXOSC3-201ENST00000327304 KIAA0087Q14695 138 aa12.53□□□□□ -0.4
EXOSC3-201ENST00000327304 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
EXOSC3-201ENST00000327304 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.41
EXOSC3-201ENST00000327304 A0A0U1RRA0 63 aa12.51□□□□□ -0.41
EXOSC3-201ENST00000327304 NPC2P61916 151 aa12.51□□□□□ -0.41
EXOSC3-201ENST00000327304 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
EXOSC3-201ENST00000327304 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
EXOSC3-201ENST00000327304 M0R2N4 97 aa12.5□□□□□ -0.41
EXOSC3-201ENST00000327304 CKS1BP61024 79 aa12.5□□□□□ -0.41
EXOSC3-201ENST00000327304 KMT2AQ03164 3969 aa12.5□□□□□ -0.41
EXOSC3-201ENST00000327304 SACSQ9NZJ4 4579 aa12.49□□□□□ -0.41
EXOSC3-201ENST00000327304 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
EXOSC3-201ENST00000327304 SOSTDC1Q6X4U4 206 aa12.48□□□□□ -0.41
EXOSC3-201ENST00000327304 LINC00158P58513 81 aa12.48□□□□□ -0.41
EXOSC3-201ENST00000327304 LYRM7Q5U5X0 104 aa12.48□□□□□ -0.41
EXOSC3-201ENST00000327304 KRTAP26-1Q6PEX3 210 aa12.48□□□□□ -0.41
EXOSC3-201ENST00000327304 MIR7-3HGQ8N6C7 128 aa12.48□□□□□ -0.41
EXOSC3-201ENST00000327304 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
EXOSC3-201ENST00000327304 C1orf43Q9BWL3 253 aa12.47□□□□□ -0.41
EXOSC3-201ENST00000327304 C2orf82Q6UX34 121 aa12.46□□□□□ -0.41
EXOSC3-201ENST00000327304 DNAH10Q8IVF4 4471 aa12.46□□□□□ -0.41
EXOSC3-201ENST00000327304 COX17Q14061 63 aa12.46□□□□□ -0.42
EXOSC3-201ENST00000327304 Q6ZR54 194 aa12.46□□□□□ -0.42
EXOSC3-201ENST00000327304 SPAG11BQ08648 103 aa12.45□□□□□ -0.42
EXOSC3-201ENST00000327304 DNAH2Q9P225 4427 aa12.44□□□□□ -0.42
EXOSC3-201ENST00000327304 PFN2P35080 140 aa12.44□□□□□ -0.42
EXOSC3-201ENST00000327304 LOC107984156A0A0G2JMH3 177 aa12.43□□□□□ -0.42
EXOSC3-201ENST00000327304 ARL17AQ8IVW1 177 aa12.43□□□□□ -0.42
EXOSC3-201ENST00000327304 RMI2Q96E14 147 aa12.43□□□□□ -0.42
EXOSC3-201ENST00000327304 HYDINQ4G0P3 5121 aa12.41□□□□□ -0.42
EXOSC3-201ENST00000327304 LCE6AA0A183 80 aa12.41□□□□□ -0.42
EXOSC3-201ENST00000327304 Q1RN00 199 aa12.41□□□□□ -0.42
EXOSC3-201ENST00000327304 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
EXOSC3-201ENST00000327304 TRBV20-1A0A075B6N2 111 aa12.39□□□□□ -0.43
EXOSC3-201ENST00000327304 H7C2G1 150 aa12.39□□□□□ -0.43
EXOSC3-201ENST00000327304 PSMB2P49721 201 aa12.39□□□□□ -0.43
EXOSC3-201ENST00000327304 NTN5Q8WTR8 489 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-201ENST00000327304 SND1-IT1Q9HBX3 110 aa12.39□□□□□ -0.43
EXOSC3-201ENST00000327304 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
EXOSC3-201ENST00000327304 GVQW2A0A096LPI5 108 aaPredicted RBP12.38□□□□□ -0.43
EXOSC3-201ENST00000327304 Q6ZRN7 208 aaPredicted RBP12.38□□□□□ -0.43
EXOSC3-201ENST00000327304 SCGB1C2P0DMR2 95 aa12.37□□□□□ -0.43
EXOSC3-201ENST00000327304 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
EXOSC3-201ENST00000327304 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
EXOSC3-201ENST00000327304 H3BMG7 143 aa12.37□□□□□ -0.43
EXOSC3-201ENST00000327304 UNQ6190/PRO20217Q6UXQ8 127 aa12.37□□□□□ -0.43
EXOSC3-201ENST00000327304 ZNF561-AS1K7EIQ3 104 aa12.35□□□□□ -0.43
EXOSC3-201ENST00000327304 C10orf25Q5T742 122 aa12.35□□□□□ -0.43
EXOSC3-201ENST00000327304 F8WDY8 70 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 PSCAO43653 123 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 TRIAP1O43715 76 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 COX6CP09669 75 aa12.34□□□□□ -0.43
EXOSC3-201ENST00000327304 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms