RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 KRTAP10-9P60411 292 aa10.2□□□□□ -0.78
SSBP3-201ENST00000326956 OBSCN-AS1Q96MR7 158 aa10.2□□□□□ -0.78
SSBP3-201ENST00000326956 C2orf48Q96LS8 159 aa10.2□□□□□ -0.78
SSBP3-201ENST00000326956 A0A087WVE0 104 aa10.19□□□□□ -0.78
SSBP3-201ENST00000326956 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
SSBP3-201ENST00000326956 J3KT08 172 aa10.19□□□□□ -0.78
SSBP3-201ENST00000326956 S100A7L2Q5SY68 101 aa10.19□□□□□ -0.78
SSBP3-201ENST00000326956 SERP2Q8N6R1 65 aa10.18□□□□□ -0.78
SSBP3-201ENST00000326956 CCDC168Q8NDH2 2452 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 GYPEP15421 78 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 Q8IZM0 81 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 CCKP06307 115 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 RNASE1P07998 156 aaKnown RBP10.17□□□□□ -0.78
SSBP3-201ENST00000326956 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 LY6G6DO95868 133 aa10.17□□□□□ -0.78
SSBP3-201ENST00000326956 FN1P02751 2386 aaKnown RBP10.16□□□□□ -0.78
SSBP3-201ENST00000326956 LOC107984640A0A0U1RRK4 108 aa10.16□□□□□ -0.78
SSBP3-201ENST00000326956 CSNK1G2-AS1Q8NCQ2 148 aa10.16□□□□□ -0.78
SSBP3-201ENST00000326956 TMEM256-PLSCR3K7ERE1 68 aa10.15□□□□□ -0.78
SSBP3-201ENST00000326956 PRB1P04280 392 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
SSBP3-201ENST00000326956 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 A0A096LPF7 62 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 IGLV1-51P01701 117 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 Q8N814 137 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 ZFYVE26Q68DK2 2539 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 FBN2P35556 2912 aa10.14□□□□□ -0.79
SSBP3-201ENST00000326956 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
SSBP3-201ENST00000326956 C19orf73Q9NVV2 129 aa10.13□□□□□ -0.79
SSBP3-201ENST00000326956 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
SSBP3-201ENST00000326956 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
SSBP3-201ENST00000326956 LINC01006Q8NI28 216 aa10.11□□□□□ -0.79
SSBP3-201ENST00000326956 UBL5Q9BZL1 73 aa10.11□□□□□ -0.79
SSBP3-201ENST00000326956 TMEM258P61165 79 aa10.1□□□□□ -0.79
SSBP3-201ENST00000326956 ATP5EP2Q5VTU8 51 aa10.1□□□□□ -0.79
SSBP3-201ENST00000326956 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
SSBP3-201ENST00000326956 NDUFC2O95298 119 aa10.1□□□□□ -0.79
SSBP3-201ENST00000326956 SETXQ7Z333 2677 aaKnown RBP10.09□□□□□ -0.79
SSBP3-201ENST00000326956 CUBNO60494 3623 aa10.09□□□□□ -0.79
SSBP3-201ENST00000326956 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
SSBP3-201ENST00000326956 LINC00167Q96N53 147 aa10.09□□□□□ -0.79
SSBP3-201ENST00000326956 PRO0255Q9UI72 69 aa10.09□□□□□ -0.79
SSBP3-201ENST00000326956 IGLV10-54A0A075B6I4 117 aa10.09□□□□□ -0.79
SSBP3-201ENST00000326956 COX17Q14061 63 aa10.09□□□□□ -0.79
SSBP3-201ENST00000326956 C6orf99Q4VX62 202 aa10.08□□□□□ -0.8
SSBP3-201ENST00000326956 FAM19A5Q7Z5A7 132 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-201ENST00000326956 GHRHP01286 108 aa10.08□□□□□ -0.8
SSBP3-201ENST00000326956 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
SSBP3-201ENST00000326956 NANOS2P60321 138 aaKnown RBP10.08□□□□□ -0.8
SSBP3-201ENST00000326956 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
SSBP3-201ENST00000326956 WFDC9Q8NEX5 89 aa10.08□□□□□ -0.8
SSBP3-201ENST00000326956 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
SSBP3-201ENST00000326956 HILS1P60008 231 aa10.07□□□□□ -0.8
SSBP3-201ENST00000326956 RPS28P62857 69 aaKnown RBP10.07□□□□□ -0.8
SSBP3-201ENST00000326956 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-201ENST00000326956 CYSTM1Q9H1C7 97 aa10.07□□□□□ -0.8
SSBP3-201ENST00000326956 NF1P21359 2839 aa10.07□□□□□ -0.8
SSBP3-201ENST00000326956 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
SSBP3-201ENST00000326956 CHCHD10Q8WYQ3 142 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-201ENST00000326956 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-201ENST00000326956 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
SSBP3-201ENST00000326956 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
SSBP3-201ENST00000326956 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
SSBP3-201ENST00000326956 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
SSBP3-201ENST00000326956 UPK3BQ9BT76 320 aa10.05□□□□□ -0.8
SSBP3-201ENST00000326956 RBM3P98179 157 aaKnown RBP10.04□□□□□ -0.8
SSBP3-201ENST00000326956 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
SSBP3-201ENST00000326956 REG3AQ06141 175 aa10.04□□□□□ -0.8
SSBP3-201ENST00000326956 KIAA0087Q14695 138 aa10.04□□□□□ -0.8
SSBP3-201ENST00000326956 MTORP42345 2549 aa10.04□□□□□ -0.8
SSBP3-201ENST00000326956 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
SSBP3-201ENST00000326956 DPH3Q96FX2 82 aa10.03□□□□□ -0.8
SSBP3-201ENST00000326956 LINC00612Q8N6U2 182 aa10.02□□□□□ -0.81
SSBP3-201ENST00000326956 DSCR8Q96T75 97 aa10.02□□□□□ -0.81
SSBP3-201ENST00000326956 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
SSBP3-201ENST00000326956 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
SSBP3-201ENST00000326956 FLNAP21333 2647 aaKnown RBP10.01□□□□□ -0.81
SSBP3-201ENST00000326956 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
SSBP3-201ENST00000326956 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
SSBP3-201ENST00000326956 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
SSBP3-201ENST00000326956 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
SSBP3-201ENST00000326956 SPAG11BQ08648 103 aa10□□□□□ -0.81
SSBP3-201ENST00000326956 ACANP16112 2415 aa9.99□□□□□ -0.81
SSBP3-201ENST00000326956 NIPBLQ6KC79 2804 aaeCLIP9.99□□□□□ -0.81
SSBP3-201ENST00000326956 HAMPP81172 84 aa9.99□□□□□ -0.81
SSBP3-201ENST00000326956 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
SSBP3-201ENST00000326956 X6R8D5 127 aa9.99□□□□□ -0.81
SSBP3-201ENST00000326956 Q8N3U1 123 aa9.98□□□□□ -0.81
SSBP3-201ENST00000326956 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
SSBP3-201ENST00000326956 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
SSBP3-201ENST00000326956 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
SSBP3-201ENST00000326956 DEFB4AO15263 64 aa9.97□□□□□ -0.81
SSBP3-201ENST00000326956 Q6ZQT0 140 aa9.97□□□□□ -0.81
SSBP3-201ENST00000326956 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-201ENST00000326956 DAD1P61803 113 aa9.96□□□□□ -0.81
SSBP3-201ENST00000326956 C6orf223Q8N319 242 aa9.96□□□□□ -0.81
SSBP3-201ENST00000326956 GCN1Q92616 2671 aaKnown RBP9.96□□□□□ -0.81
SSBP3-201ENST00000326956 Q6ZQY7 126 aa9.96□□□□□ -0.82
SSBP3-201ENST00000326956 ZNF843Q8N446 348 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms