RNA–Protein interactions for RNA: ENST00000324450.10

VEGFA-202, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-202ENST00000324450 TNXBP22105 4242 aa15.53■□□□□ 0.08
VEGFA-202ENST00000324450 LINC01549A6NIU2 74 aa15.52■□□□□ 0.08
VEGFA-202ENST00000324450 NDUFC2-KCTD14E9PQ53 114 aa15.52■□□□□ 0.08
VEGFA-202ENST00000324450 CKS1BP61024 79 aa15.52■□□□□ 0.08
VEGFA-202ENST00000324450 C1orf137Q5JT78 98 aa15.52■□□□□ 0.08
VEGFA-202ENST00000324450 FAM19A5Q7Z5A7 132 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-202ENST00000324450 ALKBH7Q9BT30 221 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-202ENST00000324450 C6orf226Q5I0X4 101 aa15.51■□□□□ 0.07
VEGFA-202ENST00000324450 Q8IZM0 81 aa15.51■□□□□ 0.07
VEGFA-202ENST00000324450 CDKN2A-AS1Q9UH64 79 aa15.5■□□□□ 0.07
VEGFA-202ENST00000324450 LINC01546A6NGU7 62 aa15.48■□□□□ 0.07
VEGFA-202ENST00000324450 MRPL18Q9H0U6 180 aaKnown RBP15.48■□□□□ 0.07
VEGFA-202ENST00000324450 FABP9Q0Z7S8 132 aa15.47■□□□□ 0.07
VEGFA-202ENST00000324450 FA2HQ7L5A8 372 aa15.46■□□□□ 0.07
VEGFA-202ENST00000324450 SMCO4Q9NRQ5 59 aa15.46■□□□□ 0.07
VEGFA-202ENST00000324450 M0QXV9 152 aa15.45■□□□□ 0.06
VEGFA-202ENST00000324450 LINC00469Q8N7U9 141 aa15.45■□□□□ 0.06
VEGFA-202ENST00000324450 KRTAP10-8P60410 259 aa15.44■□□□□ 0.06
VEGFA-202ENST00000324450 C9orf129Q5T035 196 aaKnown RBP15.44■□□□□ 0.06
VEGFA-202ENST00000324450 TINCRA0A1B0GVN0 87 aa15.43■□□□□ 0.06
VEGFA-202ENST00000324450 IGLV7-43P04211 117 aa15.43■□□□□ 0.06
VEGFA-202ENST00000324450 UBE2BP63146 152 aa15.43■□□□□ 0.06
VEGFA-202ENST00000324450 F8VRH5 84 aa15.42■□□□□ 0.06
VEGFA-202ENST00000324450 CXCL5P42830 114 aa15.42■□□□□ 0.06
VEGFA-202ENST00000324450 KRTAP7-1Q8IUC3 87 aa15.42■□□□□ 0.06
VEGFA-202ENST00000324450 KRTAP11-1Q8IUC1 163 aa15.4■□□□□ 0.06
VEGFA-202ENST00000324450 DIRC1Q969H9 104 aa15.4■□□□□ 0.06
VEGFA-202ENST00000324450 CST9LQ9H4G1 147 aa15.4■□□□□ 0.06
VEGFA-202ENST00000324450 IGLV5-45A0A087WSX0 123 aa15.39■□□□□ 0.05
VEGFA-202ENST00000324450 SMIM1B2RUZ4 78 aa15.39■□□□□ 0.05
VEGFA-202ENST00000324450 PMVKQ15126 192 aa15.39■□□□□ 0.05
VEGFA-202ENST00000324450 PDZD11Q5EBL8 140 aa15.39■□□□□ 0.05
VEGFA-202ENST00000324450 COX7B2Q8TF08 81 aa15.36■□□□□ 0.05
VEGFA-202ENST00000324450 TRAPPC1Q9Y5R8 145 aa15.36■□□□□ 0.05
VEGFA-202ENST00000324450 XAGE1AQ9HD64 81 aa15.35■□□□□ 0.05
VEGFA-202ENST00000324450 ODF1Q14990 250 aa15.33■□□□□ 0.04
VEGFA-202ENST00000324450 H0Y9J4 135 aa15.32■□□□□ 0.04
VEGFA-202ENST00000324450 H3BRM9 83 aa15.32■□□□□ 0.04
VEGFA-202ENST00000324450 SPINK8P0C7L1 97 aa15.32■□□□□ 0.04
VEGFA-202ENST00000324450 C22orf24Q9Y442 160 aa15.32■□□□□ 0.04
VEGFA-202ENST00000324450 LINC00614P0C842 121 aa15.31■□□□□ 0.04
VEGFA-202ENST00000324450 LBHQ53QV2 105 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-202ENST00000324450 C18orf32Q8TCD1 76 aa15.31■□□□□ 0.04
VEGFA-202ENST00000324450 NDUFA6P56556 154 aa15.28■□□□□ 0.04
VEGFA-202ENST00000324450 A0A096LNJ9 63 aa15.27■□□□□ 0.04
VEGFA-202ENST00000324450 HBDP02042 147 aa15.27■□□□□ 0.04
VEGFA-202ENST00000324450 IGLC3P0DOY3 106 aa15.27■□□□□ 0.04
VEGFA-202ENST00000324450 URB1-AS1Q96HZ7 61 aa15.27■□□□□ 0.04
VEGFA-202ENST00000324450 TP73-AS1Q9UF72 201 aa15.27■□□□□ 0.04
VEGFA-202ENST00000324450 NUPR1O60356 82 aa15.26■□□□□ 0.03
VEGFA-202ENST00000324450 RAB5BP61020 215 aa15.26■□□□□ 0.03
VEGFA-202ENST00000324450 CBLN2Q8IUK8 224 aa15.26■□□□□ 0.03
VEGFA-202ENST00000324450 ATP5LO75964 103 aa15.24■□□□□ 0.03
VEGFA-202ENST00000324450 S100A1P23297 94 aa15.24■□□□□ 0.03
VEGFA-202ENST00000324450 MRPL55Q7Z7F7 128 aaKnown RBP15.24■□□□□ 0.03
VEGFA-202ENST00000324450 YPEL4Q96NS1 127 aa15.24■□□□□ 0.03
VEGFA-202ENST00000324450 UBR4Q5T4S7 5183 aa15.24■□□□□ 0.03
VEGFA-202ENST00000324450 PRR26Q8N8Z3 221 aa15.23■□□□□ 0.03
VEGFA-202ENST00000324450 PMCHL1Q16048 86 aa15.22■□□□□ 0.03
VEGFA-202ENST00000324450 ZNF861PO60384 105 aa15.21■□□□□ 0.03
VEGFA-202ENST00000324450 IGLV1-50A0A075B6I6 118 aa15.2■□□□□ 0.02
VEGFA-202ENST00000324450 IGLV5-39A0A0G2JS06 123 aa15.2■□□□□ 0.02
VEGFA-202ENST00000324450 ZNF22P17026 224 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-202ENST00000324450 KRTAP1-4P0C5Y4 121 aa15.17■□□□□ 0.02
VEGFA-202ENST00000324450 BAGE3Q86Y29 109 aa15.17■□□□□ 0.02
VEGFA-202ENST00000324450 LINC00167Q96N53 147 aa15.16■□□□□ 0.02
VEGFA-202ENST00000324450 NKAPP1Q8N9T2 125 aa15.15■□□□□ 0.02
VEGFA-202ENST00000324450 IGLV5-37A0A075B6J1 123 aa15.14■□□□□ 0.01
VEGFA-202ENST00000324450 BCE1O60756 84 aa15.14■□□□□ 0.01
VEGFA-202ENST00000324450 ATP6V1G1O75348 118 aa15.14■□□□□ 0.01
VEGFA-202ENST00000324450 PFN2P35080 140 aa15.14■□□□□ 0.01
VEGFA-202ENST00000324450 TMEM170BQ5T4T1 132 aa15.14■□□□□ 0.01
VEGFA-202ENST00000324450 C11orf86A6NJI1 115 aa15.13■□□□□ 0.01
VEGFA-202ENST00000324450 RPL37AP8A6NKH3 93 aa15.13■□□□□ 0.01
VEGFA-202ENST00000324450 RPL13AP40429 203 aaKnown RBP15.13■□□□□ 0.01
VEGFA-202ENST00000324450 CHCHD1Q96BP2 118 aaKnown RBP15.13■□□□□ 0.01
VEGFA-202ENST00000324450 COLCA2A8K830 154 aa15.12■□□□□ 0.01
VEGFA-202ENST00000324450 RPL28P46779 137 aaKnown RBP15.12■□□□□ 0.01
VEGFA-202ENST00000324450 GAGE10A6NGK3 116 aa15.11■□□□□ 0.01
VEGFA-202ENST00000324450 SCO1O75880 301 aa15.11■□□□□ 0.01
VEGFA-202ENST00000324450 SFTA2Q6UW10 78 aa15.11■□□□□ 0.01
VEGFA-202ENST00000324450 ERG28Q9UKR5 140 aa15.11■□□□□ 0.01
VEGFA-202ENST00000324450 COX17Q14061 63 aa15.1■□□□□ 0.01
VEGFA-202ENST00000324450 CHTOPQ9Y3Y2 248 aaKnown RBP15.1■□□□□ 0.01
VEGFA-202ENST00000324450 LRP2P98164 4655 aa15.1■□□□□ 0.01
VEGFA-202ENST00000324450 IFI27L1Q96BM0 104 aa15.07■□□□□ 0
VEGFA-202ENST00000324450 SND1-IT1Q9HBX3 110 aa15.07■□□□□ 0
VEGFA-202ENST00000324450 TRAV12-1A0A0B4J245 112 aa15.06■□□□□ 0
VEGFA-202ENST00000324450 TRGC2P03986 189 aa15.06■□□□□ 0
VEGFA-202ENST00000324450 ZNF625Q96I27 306 aaPredicted RBP15.06■□□□□ 0
VEGFA-202ENST00000324450 RPL24P83731 157 aaKnown RBP15.03■□□□□ -0
VEGFA-202ENST00000324450 IGKV2-28A0A075B6P5 120 aa15.02■□□□□ -0
VEGFA-202ENST00000324450 IGKV2D-28P01615 120 aa15.02■□□□□ -0
VEGFA-202ENST00000324450 UBE2AP49459 152 aa15.02■□□□□ -0
VEGFA-202ENST00000324450 HSBP1O75506 76 aa15.01□□□□□ -0.01
VEGFA-202ENST00000324450 VPREB1P12018 145 aa15.01□□□□□ -0.01
VEGFA-202ENST00000324450 TMEM223A0PJW6 202 aa15□□□□□ -0.01
VEGFA-202ENST00000324450 LINC00158P58513 81 aa14.97□□□□□ -0.01
VEGFA-202ENST00000324450 KRTAP13-1Q8IUC0 172 aa14.97□□□□□ -0.01
VEGFA-202ENST00000324450 FAM19A2Q8N3H0 131 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms