RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 IGLV1-50A0A075B6I6 118 aa7.38□□□□□ -1.23
TPM3-204ENST00000323144 HERVK_113P63121 156 aa7.38□□□□□ -1.23
TPM3-204ENST00000323144 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
TPM3-204ENST00000323144 TIMM17AQ99595 171 aa7.38□□□□□ -1.23
TPM3-204ENST00000323144 F8VRH5 84 aa7.37□□□□□ -1.23
TPM3-204ENST00000323144 K7EMI3 77 aa7.37□□□□□ -1.23
TPM3-204ENST00000323144 GEMIN7Q9H840 131 aaKnown RBP7.37□□□□□ -1.23
TPM3-204ENST00000323144 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
TPM3-204ENST00000323144 RAB14P61106 215 aa7.36□□□□□ -1.23
TPM3-204ENST00000323144 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
TPM3-204ENST00000323144 CLLU1Q5K131 121 aa7.36□□□□□ -1.23
TPM3-204ENST00000323144 IGLV5-45A0A087WSX0 123 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 ZNF861PO60384 105 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 SPINK8P0C7L1 97 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 CXCL5P42830 114 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 SEC11AP67812 179 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 ERASQ7Z444 233 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
TPM3-204ENST00000323144 COX7B2Q8TF08 81 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 SCGB3A1Q96QR1 104 aa7.34□□□□□ -1.23
TPM3-204ENST00000323144 A0A087X002 238 aa7.33□□□□□ -1.24
TPM3-204ENST00000323144 NUPR1O60356 82 aa7.33□□□□□ -1.24
TPM3-204ENST00000323144 RPL13AP40429 203 aaKnown RBP7.33□□□□□ -1.24
TPM3-204ENST00000323144 PAPPA-AS1Q5QFB9 102 aa7.33□□□□□ -1.24
TPM3-204ENST00000323144 TINCRA0A1B0GVN0 87 aa7.32□□□□□ -1.24
TPM3-204ENST00000323144 GAGE10A6NGK3 116 aa7.32□□□□□ -1.24
TPM3-204ENST00000323144 RPL37AP8A6NKH3 93 aa7.32□□□□□ -1.24
TPM3-204ENST00000323144 SCO1O75880 301 aa7.32□□□□□ -1.24
TPM3-204ENST00000323144 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
TPM3-204ENST00000323144 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 TMEM218A2RU14 115 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 LINC01546A6NGU7 62 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 BCE1O60756 84 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 IFITM2Q01629 132 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 PRR4Q16378 134 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
TPM3-204ENST00000323144 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
TPM3-204ENST00000323144 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
TPM3-204ENST00000323144 CST9LQ9H4G1 147 aa7.3□□□□□ -1.24
TPM3-204ENST00000323144 A0A096LNJ9 63 aa7.29□□□□□ -1.24
TPM3-204ENST00000323144 UQCC3Q6UW78 93 aa7.29□□□□□ -1.24
TPM3-204ENST00000323144 GNB1LQ9BYB4 327 aa7.29□□□□□ -1.24
TPM3-204ENST00000323144 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
TPM3-204ENST00000323144 CARHSP1Q9Y2V2 147 aaKnown RBP7.29□□□□□ -1.24
TPM3-204ENST00000323144 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 TSPAN13O95857 204 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 G0S2P27469 103 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 RPL28P46779 137 aaKnown RBP7.28□□□□□ -1.24
TPM3-204ENST00000323144 RAB5BP61020 215 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 FA2HQ7L5A8 372 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
TPM3-204ENST00000323144 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 IGKV2D-28P01615 120 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 S100PP25815 95 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 PMVKQ15126 192 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 COMMD7Q86VX2 200 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 URB1-AS1Q96HZ7 61 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 SEC11CQ9BY50 192 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
TPM3-204ENST00000323144 IGLC3P0DOY3 106 aa7.26□□□□□ -1.25
TPM3-204ENST00000323144 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
TPM3-204ENST00000323144 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
TPM3-204ENST00000323144 Q8NDZ9 215 aa7.26□□□□□ -1.25
TPM3-204ENST00000323144 IGLV5-39A0A0G2JS06 123 aa7.25□□□□□ -1.25
TPM3-204ENST00000323144 ZNF22P17026 224 aaPredicted RBP7.25□□□□□ -1.25
TPM3-204ENST00000323144 PMCHL1Q16048 86 aa7.25□□□□□ -1.25
TPM3-204ENST00000323144 ATP5LO75964 103 aa7.24□□□□□ -1.25
TPM3-204ENST00000323144 PFN2P35080 140 aa7.24□□□□□ -1.25
TPM3-204ENST00000323144 UBE2AP49459 152 aa7.24□□□□□ -1.25
TPM3-204ENST00000323144 PRLHP81277 87 aa7.24□□□□□ -1.25
TPM3-204ENST00000323144 FABP9Q0Z7S8 132 aa7.24□□□□□ -1.25
TPM3-204ENST00000323144 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
TPM3-204ENST00000323144 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
TPM3-204ENST00000323144 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
TPM3-204ENST00000323144 H3BRM9 83 aa7.23□□□□□ -1.25
TPM3-204ENST00000323144 VPREB1P12018 145 aa7.23□□□□□ -1.25
TPM3-204ENST00000323144 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
TPM3-204ENST00000323144 C11orf86A6NJI1 115 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 CRYGAP11844 174 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 NDUFA6P56556 154 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 RHEBQ15382 184 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
TPM3-204ENST00000323144 RETNLBQ9BQ08 111 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 ERG28Q9UKR5 140 aa7.22□□□□□ -1.25
TPM3-204ENST00000323144 HBDP02042 147 aa7.21□□□□□ -1.26
TPM3-204ENST00000323144 COX19Q49B96 90 aa7.21□□□□□ -1.26
TPM3-204ENST00000323144 C10orf91Q5T1B1 145 aa7.21□□□□□ -1.26
TPM3-204ENST00000323144 TMEM126AQ9H061 195 aa7.2□□□□□ -1.26
TPM3-204ENST00000323144 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
TPM3-204ENST00000323144 M0R378 163 aa7.18□□□□□ -1.26
TPM3-204ENST00000323144 TRAPPC1Q9Y5R8 145 aa7.18□□□□□ -1.26
TPM3-204ENST00000323144 MUC2Q02817 5179 aa7.17□□□□□ -1.26
TPM3-204ENST00000323144 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
TPM3-204ENST00000323144 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
TPM3-204ENST00000323144 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
TPM3-204ENST00000323144 LINC00614P0C842 121 aa7.16□□□□□ -1.26
TPM3-204ENST00000323144 C3orf22Q8N5N4 141 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms