RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SMIM9A6NGZ8 99 aa9.01□□□□□ -0.97
DNMT3A-202ENST00000321117 FHL2Q14192 279 aa9.01□□□□□ -0.97
DNMT3A-202ENST00000321117 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
DNMT3A-202ENST00000321117 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
DNMT3A-202ENST00000321117 LOC400499M0QZD8 3231 aa9□□□□□ -0.97
DNMT3A-202ENST00000321117 IGHV3OR16-9A0A0B4J2B5 98 aa9□□□□□ -0.97
DNMT3A-202ENST00000321117 C9orf66Q5T8R8 295 aa9□□□□□ -0.97
DNMT3A-202ENST00000321117 ACANP16112 2415 aa9□□□□□ -0.97
DNMT3A-202ENST00000321117 KRTAP10-9P60411 292 aa8.99□□□□□ -0.97
DNMT3A-202ENST00000321117 Q8N814 137 aa8.99□□□□□ -0.97
DNMT3A-202ENST00000321117 LYRM9A8MSI8 78 aa8.98□□□□□ -0.97
DNMT3A-202ENST00000321117 A8MTW9 85 aa8.98□□□□□ -0.97
DNMT3A-202ENST00000321117 PLA2G2AP14555 144 aa8.98□□□□□ -0.97
DNMT3A-202ENST00000321117 COX7BP24311 80 aa8.98□□□□□ -0.97
DNMT3A-202ENST00000321117 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
DNMT3A-202ENST00000321117 Q6ZQY7 126 aa8.98□□□□□ -0.97
DNMT3A-202ENST00000321117 FASNP49327 2511 aaKnown RBP8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 COX17Q14061 63 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 CENPEQ02224 2701 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 EPG5Q9HCE0 2579 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 SMCR5Q8TEV8 140 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 NDUFC2O95298 119 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 IGLV1-51P01701 117 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
DNMT3A-202ENST00000321117 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.97
DNMT3A-202ENST00000321117 FAM236CP0DP71 79 aa8.96□□□□□ -0.97
DNMT3A-202ENST00000321117 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.97
DNMT3A-202ENST00000321117 DMXL2Q8TDJ6 3036 aa8.96□□□□□ -0.98
DNMT3A-202ENST00000321117 NREPQ16612 68 aa8.96□□□□□ -0.98
DNMT3A-202ENST00000321117 LINC00482Q8N8I6 264 aa8.95□□□□□ -0.98
DNMT3A-202ENST00000321117 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
DNMT3A-202ENST00000321117 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
DNMT3A-202ENST00000321117 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
DNMT3A-202ENST00000321117 LINC01600Q96MT4 127 aa8.95□□□□□ -0.98
DNMT3A-202ENST00000321117 IGKV2D-24A0A075B6R9 120 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 BRK1Q8WUW1 75 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 PKIGQ9Y2B9 76 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 PSCAO43653 123 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 KIR2DL5BQ8NHK3 375 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 LRBAP50851 2863 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
DNMT3A-202ENST00000321117 A0A1B0GUV1 79 aa8.93□□□□□ -0.98
DNMT3A-202ENST00000321117 CRYGAP11844 174 aa8.93□□□□□ -0.98
DNMT3A-202ENST00000321117 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
DNMT3A-202ENST00000321117 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
DNMT3A-202ENST00000321117 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
DNMT3A-202ENST00000321117 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
DNMT3A-202ENST00000321117 FAM104AQ969W3 186 aa8.92□□□□□ -0.98
DNMT3A-202ENST00000321117 FUSP35637 526 aaKnown RBP eCLIP8.91□□□□□ -0.98
DNMT3A-202ENST00000321117 CYSRT1A8MQ03 144 aa8.91□□□□□ -0.98
DNMT3A-202ENST00000321117 HILS1P60008 231 aa8.91□□□□□ -0.98
DNMT3A-202ENST00000321117 IGHV4-28A0A0C4DH34 117 aa8.89□□□□□ -0.99
DNMT3A-202ENST00000321117 FSHBP01225 129 aa8.89□□□□□ -0.99
DNMT3A-202ENST00000321117 WDFY3Q8IZQ1 3526 aa8.89□□□□□ -0.99
DNMT3A-202ENST00000321117 MUC7Q8TAX7 377 aa8.89□□□□□ -0.99
DNMT3A-202ENST00000321117 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
DNMT3A-202ENST00000321117 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
DNMT3A-202ENST00000321117 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
DNMT3A-202ENST00000321117 CFAP47Q6ZTR5 3102 aa8.88□□□□□ -0.99
DNMT3A-202ENST00000321117 ETDCA0A1B0GVM5 59 aa8.87□□□□□ -0.99
DNMT3A-202ENST00000321117 LELP1Q5T871 98 aa8.87□□□□□ -0.99
DNMT3A-202ENST00000321117 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
DNMT3A-202ENST00000321117 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
DNMT3A-202ENST00000321117 LINC00575Q6W349 94 aa8.87□□□□□ -0.99
DNMT3A-202ENST00000321117 BPY2O14599 106 aa8.86□□□□□ -0.99
DNMT3A-202ENST00000321117 ZNF73O43830 326 aaPredicted RBP8.86□□□□□ -0.99
DNMT3A-202ENST00000321117 MIFP14174 115 aa8.86□□□□□ -0.99
DNMT3A-202ENST00000321117 ZNF843Q8N446 348 aa8.86□□□□□ -0.99
DNMT3A-202ENST00000321117 TRBV10-3A0A0K0K1G6 114 aa8.85□□□□□ -0.99
DNMT3A-202ENST00000321117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
DNMT3A-202ENST00000321117 TNRC18O15417 2968 aaPredicted RBP8.85□□□□□ -0.99
DNMT3A-202ENST00000321117 C6orf223Q8N319 242 aa8.85□□□□□ -0.99
DNMT3A-202ENST00000321117 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
DNMT3A-202ENST00000321117 IL17DQ8TAD2 202 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 UBE2BP63146 152 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 ATMQ13315 3056 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 MP68P56378 58 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 RMI2Q96E14 147 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 J3QKU1 62 aa8.83□□□□□ -1
DNMT3A-202ENST00000321117 Q6ZVQ6 151 aa8.82□□□□□ -1
DNMT3A-202ENST00000321117 M0R378 163 aa8.82□□□□□ -1
DNMT3A-202ENST00000321117 RPS28P62857 69 aaKnown RBP8.82□□□□□ -1
DNMT3A-202ENST00000321117 NDUFC1O43677 76 aa8.81□□□□□ -1
DNMT3A-202ENST00000321117 A0A096LNT2 108 aa8.81□□□□□ -1
DNMT3A-202ENST00000321117 Q8N3U1 123 aa8.81□□□□□ -1
DNMT3A-202ENST00000321117 C16orf95Q9H693 158 aa8.81□□□□□ -1
DNMT3A-202ENST00000321117 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
DNMT3A-202ENST00000321117 C3orf84H3BNL1 204 aa8.8□□□□□ -1
DNMT3A-202ENST00000321117 DMXL1Q9Y485 3027 aa8.8□□□□□ -1
DNMT3A-202ENST00000321117 PRB2P02812 416 aaPredicted RBP8.8□□□□□ -1
DNMT3A-202ENST00000321117 C9orf129Q5T035 196 aaKnown RBP8.8□□□□□ -1
DNMT3A-202ENST00000321117 V9GYY9 64 aa8.79□□□□□ -1
DNMT3A-202ENST00000321117 LY6G6DO95868 133 aa8.78□□□□□ -1
DNMT3A-202ENST00000321117 SERP1Q9Y6X1 66 aa8.78□□□□□ -1
DNMT3A-202ENST00000321117 NDUFS5O43920 106 aa8.77□□□□□ -1.01
DNMT3A-202ENST00000321117 SYCNQ0VAF6 134 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms